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IMGVR_UViG_3300000510_000211-3300000510-Foulum_100337513

Arc-Vir

IMGVR_UViG_3300000510_000211-3300000510-Foulum_100337513

Quality

91.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 263-321
PDB
Domain cluster: representative
CATH (80)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.73 54.0 4.70e-01 100.0% 52.2%
4bfeA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.71 51.0 4.61e-01 100.0% 55.6%
1xdxA01 3.30.1140.40 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 0.66 51.0 4.39e-01 100.0% 51.0%
4r6uA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 49.0 4.11e-01 100.0% 45.6%
2wdoA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.66 57.0 4.55e-01 98.3% 98.4%
3gwmA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.65 56.0 4.45e-01 100.0% 100.0%
2bddA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.65 57.0 4.49e-01 100.0% 96.1%
1mhmA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.65 51.0 3.37e-01 100.0% 20.2%
4frwA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 53.0 4.50e-01 100.0% 55.2%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 51.0 4.39e-01 100.0% 53.7%
1jw3A00 3.55.10.10 Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain 0.65 54.0 4.19e-01 100.0% 40.7%
5is2A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 50.0 4.35e-01 98.3% 54.9%
5cxdB01 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.65 58.0 4.59e-01 100.0% 93.3%
1fthA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.64 57.0 4.55e-01 100.0% 95.7%
4g2uA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.64 56.0 3.86e-01 100.0% 39.5%
4p27A00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.64 55.0 4.08e-01 98.3% 45.2%
2nyiA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 50.0 4.44e-01 100.0% 58.9%
3uebF00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.63 54.0 4.62e-01 100.0% 65.0%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.62 52.0 4.18e-01 100.0% 99.2%
3o4oB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 52.0 4.32e-01 100.0% 53.2%
3fbqA01 2.60.40.1630 Mainly Beta › Sandwich › Immunoglobulin-like › bacillus anthracis domain 0.61 51.0 3.88e-01 100.0% 38.9%
1z94B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 54.0 4.05e-01 100.0% 80.4%
2ogkD00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.60 47.0 3.59e-01 100.0% 35.9%
2lf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 52.0 3.80e-01 100.0% 68.0%
5u1xA02 2.60.490.10 Mainly Beta › Sandwich › atp-gated p2x4 ion channel fold › atp-gated p2x4 ion channel domain 0.60 51.0 3.39e-01 100.0% 75.6%
2petA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 53.0 4.28e-01 100.0% 50.9%
1hw7A01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.60 53.0 3.81e-01 100.0% 93.1%
4of0A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 53.0 4.14e-01 100.0% 57.3%
1ej6A02 3.55.60.10 Alpha Beta › 3-Layer(bab) Sandwich › Reovirus components fold › Reovirus components 0.59 49.0 3.76e-01 100.0% 37.8%
2ldkA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 51.0 3.76e-01 100.0% 69.2%
6n2nA01 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.59 48.0 3.45e-01 100.0% 29.8%
2h00B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 46.0 3.20e-01 100.0% 24.8%
2abyA00 3.30.70.1980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF09406, DUF2004 0.59 48.0 3.83e-01 100.0% 44.3%
3o3uN03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 46.0 3.88e-01 100.0% 48.6%
6nhsA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 52.0 3.42e-01 100.0% 84.9%
1hxdA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.58 50.0 3.54e-01 100.0% 39.6%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 50.0 3.71e-01 100.0% 59.6%
2x3gA00 3.30.70.1910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 48.0 3.87e-01 100.0% 47.4%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 50.0 3.76e-01 100.0% 73.2%
6d6tA01 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.58 49.0 3.42e-01 98.3% 35.2%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 46.0 4.06e-01 100.0% 58.7%
1d06A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 49.0 3.85e-01 98.3% 79.2%
2vqeC02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.57 50.0 4.17e-01 100.0% 57.0%
2c42A03 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.57 50.0 3.40e-01 100.0% 27.4%
3pxpA02 3.30.450.180 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.57 49.0 3.45e-01 100.0% 79.4%
2raaA00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.57 49.0 3.46e-01 100.0% 31.5%
1s67L00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 49.0 3.98e-01 100.0% 87.4%
5a2fA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 44.0 3.74e-01 100.0% 48.2%
3kd4A03 2.60.120.1130 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 3.77e-01 100.0% 77.4%
4hh2C04 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 48.0 3.94e-01 100.0% 85.5%
1xn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 49.0 3.77e-01 100.0% 70.3%
5i8fA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 48.0 3.58e-01 100.0% 72.0%
3duwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 48.0 3.34e-01 100.0% 28.3%
1xfsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 50.0 3.66e-01 100.0% 75.3%
3jamD02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.55 49.0 3.76e-01 100.0% 43.6%
1uw4A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 42.0 3.76e-01 100.0% 57.1%
2w7vA00 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.55 40.0 3.68e-01 100.0% 58.5%
7dluA03 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 45.0 4.23e-01 100.0% 74.7%
4hh2B03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 46.0 3.96e-01 98.3% 99.0%
4bsjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 3.80e-01 100.0% 56.9%
4nehA04 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.55 46.0 3.50e-01 100.0% 81.2%
3e23A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 47.0 3.32e-01 100.0% 32.3%
1lg7A00 3.10.460.10 Alpha Beta › Roll › VSV matrix protein › VSV matrix protein 0.54 46.0 3.42e-01 100.0% 40.9%
7pwfD02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.54 47.0 4.07e-01 98.3% 64.0%
6efyA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 43.0 3.72e-01 100.0% 55.1%
2w2sA00 3.10.460.20 Alpha Beta › Roll › VSV matrix protein › Rhabdovirus matrix protein M2 0.53 48.0 3.46e-01 100.0% 63.8%
3mjgX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 3.50e-01 100.0% 50.5%
3bguA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 46.0 3.97e-01 100.0% 62.5%
4lrzE02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 46.0 3.98e-01 100.0% 100.0%
3f8uB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 3.60e-01 100.0% 88.9%
3ue2A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 45.0 4.04e-01 100.0% 67.0%
3c6kB03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 44.0 3.21e-01 100.0% 32.6%
1wjwA01 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.53 46.0 4.14e-01 100.0% 75.3%
5ja2A01 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.53 46.0 3.01e-01 100.0% 65.5%
3b33A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 45.0 3.75e-01 100.0% 89.9%
3oloA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 44.0 3.70e-01 100.0% 85.6%
1f5aA01 3.30.70.590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain 0.52 44.0 3.73e-01 100.0% 59.8%
2mq8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.52 46.0 3.77e-01 100.0% 54.5%
6pf8A01 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.52 39.0 2.92e-01 100.0% 28.4%
7altB01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 43.0 3.21e-01 100.0% 96.2%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4085595 301.8.1.1 a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS 0.70 61.0 4.74e-01 100.0% 99.3%
4058190 301.8.1.1 a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS 0.70 60.0 4.75e-01 100.0% 100.0%
3921201 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 52.0 4.43e-01 100.0% 50.5%
3542615 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.69 52.0 4.56e-01 100.0% 52.6%
4002543 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 60.0 4.95e-01 100.0% 59.0%
5068347 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.65 53.0 3.82e-01 100.0% 30.3%
3582958 864.1.1.2 a+b two layers › DLC › DLC › DLC › Tctex-1 0.65 55.0 4.35e-01 100.0% 45.8%
4673207 256.1.1.10 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › MinE 0.65 58.0 5.11e-01 100.0% 71.8%
5032543 301.8.1.1 a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS 0.64 55.0 4.35e-01 100.0% 98.5%
5029900 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.63 46.0 3.58e-01 100.0% 36.8%
3786241 864.1.1.2 a+b two layers › DLC › DLC › DLC › Tctex-1 0.63 52.0 4.38e-01 100.0% 53.4%
4653756 301.8.1.1 a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS 0.62 54.0 4.34e-01 98.3% 98.3%
3491163 864.1.1.2 a+b two layers › DLC › DLC › DLC › Tctex-1 0.62 52.0 4.11e-01 100.0% 43.8%
4966310 223.8.1.0 a+b three layers › Profilin-like › LapD periplasmic domain › LapD periplasmic domain 0.62 47.0 4.08e-01 100.0% 52.1%
4959915 256.1.1.1 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.62 52.0 4.99e-01 100.0% 81.4%
3854060 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 54.0 3.84e-01 100.0% 68.3%
5033853 4182.1.1.0 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.61 52.0 3.97e-01 100.0% 98.1%
3889152 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.61 53.0 4.33e-01 100.0% 51.3%
3379279 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.61 53.0 4.08e-01 100.0% 70.0%
3745755 3483.1.1.1 beta sandwiches › P2X purinoceptor › P2X purinoceptor › P2X purinoceptor › P2X_receptor 0.61 52.0 3.21e-01 100.0% 54.7%
5035707 4182.1.1.0 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.61 52.0 3.71e-01 100.0% 74.7%
5034309 4182.1.1.0 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.60 49.0 3.69e-01 91.5% 98.7%
3627135 11.1.1.3 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.60 52.0 3.86e-01 100.0% 38.1%
5034176 4182.1.1.0 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.60 50.0 3.78e-01 100.0% 95.6%
4149293 11.1.1.805 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_PDGFR_d4 0.59 53.0 3.96e-01 100.0% 44.8%
3164555 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 51.0 3.87e-01 100.0% 40.7%
3816949 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.59 51.0 3.31e-01 100.0% 20.7%
3919886 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 51.0 4.23e-01 100.0% 54.5%
3391269 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.59 49.0 4.08e-01 100.0% 57.4%
3992439 273.1.1.0 a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.58 49.0 3.75e-01 100.0% 39.3%
4941509 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.58 51.0 3.91e-01 100.0% 42.9%
5069789 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.58 47.0 3.66e-01 98.3% 40.8%
3970978 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.58 50.0 3.31e-01 100.0% 35.8%
3175839 11.1.1.376 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mid1 0.58 49.0 3.71e-01 100.0% 67.1%
5038030 327.16.1.1 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin 0.58 47.0 3.20e-01 100.0% 32.1%
5002717 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.57 49.0 4.20e-01 100.0% 60.0%
4317100 230.2.1.2 a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › VAR1 0.57 52.0 4.15e-01 100.0% 60.0%
4316087 230.2.1.0 a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C 0.57 52.0 4.03e-01 100.0% 48.3%
4255187 230.2.1.1 a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.57 50.0 4.06e-01 100.0% 51.8%
5035675 4182.1.1.0 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.57 49.0 3.60e-01 100.0% 77.6%
3322115 230.2.1.1 a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.57 50.0 4.00e-01 100.0% 49.6%
4505312 230.2.1.2 a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › VAR1 0.57 51.0 4.31e-01 100.0% 62.1%
4191473 223.1.1.59 a+b three layers › Profilin-like › sensor domains › sensor domains › ArlS_N 0.57 50.0 4.04e-01 100.0% 60.0%
5067643 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 45.0 3.76e-01 96.6% 49.5%
3920618 3483.1.1.1 beta sandwiches › P2X purinoceptor › P2X purinoceptor › P2X purinoceptor › P2X_receptor 0.57 48.0 3.05e-01 100.0% 57.9%
3490212 314.1.1.6 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB 0.56 48.0 3.17e-01 100.0% 47.3%
3967308 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.56 50.0 3.62e-01 100.0% 40.0%
4253051 301.8.1.3 a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › AASDHPPT_N 0.56 48.0 3.54e-01 100.0% 70.6%
4028203 230.2.1.1 a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.56 49.0 4.10e-01 100.0% 57.6%
3500525 11.12.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.56 47.0 3.49e-01 98.3% 47.1%
4595711 230.2.1.1 a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.55 49.0 3.74e-01 100.0% 43.6%
4832865 230.2.1.1 a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.55 49.0 3.82e-01 100.0% 46.4%
4877694 304.51.1.3 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_assoc 0.55 47.0 3.85e-01 100.0% 72.6%
3879276 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.55 46.0 3.68e-01 100.0% 81.5%
3268309 223.1.1.8 a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE 0.55 48.0 3.07e-01 100.0% 20.3%
4927297 230.2.1.1 a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.55 49.0 3.87e-01 100.0% 48.3%
3473794 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 3.57e-01 100.0% 86.9%
4655771 230.2.1.2 a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › VAR1 0.55 50.0 3.88e-01 100.0% 59.7%
4956195 230.2.1.1 a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.55 48.0 3.90e-01 100.0% 52.7%
4333074 230.2.1.0 a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C 0.54 50.0 3.82e-01 100.0% 57.8%
3968365 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.54 46.0 3.44e-01 100.0% 38.8%
3496185 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 48.0 3.79e-01 100.0% 60.8%
3706456 304.55.2.8 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › FAZ1_cons 0.53 45.0 4.02e-01 100.0% 70.0%
4940890 230.2.1.1 a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.53 48.0 3.72e-01 100.0% 47.2%
184954 845.1.1.0 a+b complex topology › VSV matrix protein › VSV matrix protein › VSV matrix protein 0.53 48.0 3.46e-01 100.0% 63.8%
4027196 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 46.0 3.91e-01 100.0% 59.0%
3517528 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 3.75e-01 100.0% 57.0%
5028718 223.8.1.0 a+b three layers › Profilin-like › LapD periplasmic domain › LapD periplasmic domain 0.53 44.0 3.78e-01 98.3% 57.1%
3215582 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.53 46.0 3.65e-01 100.0% 49.6%
3878682 11.12.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.53 42.0 2.99e-01 94.9% 32.4%
3220160 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 47.0 3.56e-01 100.0% 92.9%
1680274 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.53 45.0 3.88e-01 100.0% 60.6%
3675857 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.52 44.0 3.23e-01 100.0% 51.4%
434772 3213.1.1.1 a+b two layers › hypothetical protein TTHB210 › hypothetical protein TTHB210 › hypothetical protein TTHB210 › TTHB210-like 0.52 43.0 3.62e-01 100.0% 52.6%
3579209 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.52 46.0 3.67e-01 100.0% 50.8%
3808479 387.1.5.0 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.52 43.0 4.37e-01 100.0% 95.0%
4887083 872.1.1.2 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin 0.52 42.0 3.99e-01 98.3% 76.6%
4000068 382.1.1.23 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › PF29371 0.51 45.0 3.52e-01 100.0% 71.5%
3753929 11.1.1.290 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ASTN1_2_fn3 0.51 41.0 3.21e-01 100.0% 72.3%
3507046 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.50 45.0 3.84e-01 100.0% 86.3%
D2 medium residues 1-261
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wckA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.73 39.0 5.43e-01 97.3% 100.0%
1pk6C00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.73 37.0 5.32e-01 100.0% 100.0%
3j4uH00 2.60.120.1110 Mainly Beta › Sandwich › Jelly Rolls › 0.69 34.0 4.62e-01 72.4% 88.6%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 36.0 4.92e-01 98.9% 98.6%
2w1sA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 32.0 4.31e-01 70.9% 84.9%
1alyA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.65 37.0 4.92e-01 84.3% 99.3%
4mxwD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.65 34.0 4.77e-01 98.5% 100.0%
1s55A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 39.0 5.01e-01 99.6% 100.0%
1dg6A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 37.0 4.95e-01 98.9% 100.0%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.63 26.0 3.84e-01 98.1% 82.5%
2w47A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 33.0 4.49e-01 83.1% 97.0%
7uzsX04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 26.0 4.03e-01 70.5% 99.0%
4qawH03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 32.0 4.38e-01 82.8% 99.3%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 37.0 4.64e-01 99.6% 100.0%
2v72A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 32.0 4.41e-01 82.0% 100.0%
2yc2A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 31.0 4.31e-01 82.0% 100.0%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 34.0 4.45e-01 95.8% 100.0%
1tvgA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 32.0 4.29e-01 71.3% 100.0%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 37.0 4.50e-01 87.7% 94.9%
1kshB00 2.70.50.40 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › GMP phosphodiesterase, delta subunit 0.58 30.0 3.91e-01 70.1% 88.7%
3l9bA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.57 29.0 4.13e-01 98.9% 100.0%
6ovbA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 34.0 4.34e-01 82.0% 100.0%
1cx1A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 33.0 4.26e-01 81.2% 98.7%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 37.0 3.93e-01 87.0% 74.5%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 35.0 4.34e-01 98.1% 98.2%
4kq7A01 2.60.120.1390 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 0.56 34.0 4.26e-01 97.7% 97.5%
3nngA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 33.0 4.24e-01 80.8% 100.0%
2y8kA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 31.0 4.13e-01 83.1% 100.0%
2e26A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 33.0 4.18e-01 100.0% 100.0%
4kq7A02 2.60.120.1390 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 0.54 35.0 3.84e-01 98.5% 78.2%
1hn0A01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.54 36.0 4.26e-01 96.2% 94.6%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 35.0 4.20e-01 83.1% 100.0%
3iiiA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 36.0 4.25e-01 98.5% 100.0%
1k42A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 33.0 4.13e-01 96.9% 100.0%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4993280 10.3.1.0 beta sandwiches › jelly-roll › TNF-like › TNF-like 0.83 73.0 7.64e-01 97.3% 100.0%
4887934 10.3.1.8 beta sandwiches › jelly-roll › TNF-like › TNF-like › Bc2l-C_N 0.81 43.0 6.02e-01 96.6% 100.0%
4951620 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.75 35.0 5.19e-01 83.1% 100.0%
3979069 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.73 35.0 5.16e-01 99.2% 100.0%
5042811 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.72 34.0 5.10e-01 98.1% 100.0%
4011220 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.72 36.0 5.12e-01 71.6% 100.0%
3701810 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.71 34.0 4.90e-01 82.4% 96.7%
3597601 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 34.0 4.78e-01 82.0% 92.3%
3908506 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.70 37.0 5.04e-01 99.2% 95.7%
3913258 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.70 38.0 5.23e-01 99.6% 100.0%
3661818 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 30.0 4.59e-01 90.4% 95.5%
3890782 10.3.1.0 beta sandwiches › jelly-roll › TNF-like › TNF-like 0.68 38.0 5.15e-01 98.5% 100.0%
4076905 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.66 34.0 4.22e-01 77.4% 77.0%
3906505 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.65 36.0 4.94e-01 99.2% 100.0%
3934059 10.32.1.216 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM 0.65 34.0 4.27e-01 78.2% 81.3%
4944599 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 34.0 4.58e-01 97.3% 99.3%
3252755 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.62 33.0 4.40e-01 98.5% 99.2%
4459811 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 30.0 4.28e-01 82.8% 100.0%
5061835 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 36.0 4.59e-01 98.1% 100.0%
3621194 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.59 29.0 4.07e-01 83.9% 93.8%
3424937 10.32.1.8 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.59 39.0 4.67e-01 98.9% 97.1%
4615128 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 35.0 4.48e-01 73.2% 100.0%
5019349 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 40.0 4.77e-01 85.4% 97.8%
4937335 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 36.0 4.39e-01 85.8% 93.5%
4947719 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 36.0 4.44e-01 98.1% 99.4%
4099249 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 34.0 4.32e-01 70.5% 99.4%
2559844 10.32.1.77 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Reelin_subrepeat-B 0.56 33.0 4.25e-01 94.3% 100.0%
4509186 10.32.1.8 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.56 36.0 4.33e-01 97.3% 97.1%
3949369 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 37.0 4.31e-01 86.6% 96.8%
3307787 207.1.1.43 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 0.54 40.0 3.16e-01 94.6% 37.5%
5041016 10.1.2.181 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › CBM_4_9 0.54 34.0 4.22e-01 96.9% 100.0%
3707089 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.53 30.0 3.95e-01 73.9% 100.0%
4255542 10.32.1.216 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM 0.53 34.0 4.17e-01 99.2% 99.4%
3894462 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.53 33.0 4.09e-01 83.9% 99.4%
3538224 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.53 33.0 4.08e-01 85.4% 98.2%
3827637 207.1.1.37 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID 0.53 39.0 4.02e-01 94.3% 80.0%
4212858 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.52 35.0 4.16e-01 99.2% 95.7%
3027437 10.32.1.37 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin 0.51 33.0 4.03e-01 99.2% 100.0%
3640140 11.2.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2, C2_Mug190_3rd 0.51 33.0 2.83e-01 85.1% 41.0%
3833446 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 37.0 2.66e-01 79.3% 26.2%
3456716 10.32.1.38 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like 0.51 39.0 4.31e-01 96.2% 98.5%
3773390 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.51 33.0 4.03e-01 100.0% 99.4%
3998369 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 30.0 3.81e-01 85.1% 96.1%
5042747 11.1.1.51 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 0.51 25.0 3.15e-01 99.6% 74.1%
3539817 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 29.0 3.54e-01 71.6% 86.1%
3312078 207.1.1.119 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_13 0.50 38.0 3.80e-01 94.6% 72.5%