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IMGVR_UViG_3300000557_000438-3300000557-SL_8KL_010_SEDDRAFT_1000853610
Arc-VirIMGVR_UViG_3300000557_000438-3300000557-SL_8KL_010_SEDDRAFT_1000853610
Identity
- Kingdom:
- archaea
Quality
84.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-70
Domain cluster:
representative
CATH (79)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.93 | 73.0 | 7.76e-01 | 100.0% | 93.8% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 64.0 | 6.20e-01 | 92.6% | 70.5% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 63.0 | 5.90e-01 | 92.6% | 66.2% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 76.0 | 7.07e-01 | 100.0% | 83.3% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 60.0 | 5.86e-01 | 92.6% | 71.7% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 63.0 | 6.00e-01 | 96.3% | 71.4% |
| 3jr7A01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.81 | 55.0 | 4.15e-01 | 70.4% | 90.7% |
| 1fc3B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 66.0 | 5.40e-01 | 92.6% | 55.4% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.80 | 68.0 | 6.14e-01 | 100.0% | 69.2% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 60.0 | 5.95e-01 | 98.1% | 80.4% |
| 4kmfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 62.0 | 5.91e-01 | 98.1% | 75.8% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 63.0 | 6.31e-01 | 96.3% | 88.9% |
| 3c3dA02 | 1.10.8.240 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › CofD-like domain | 0.77 | 53.0 | 4.45e-01 | 72.2% | 62.5% |
| 3l9wA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.77 | 52.0 | 3.66e-01 | 70.4% | 33.7% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.77 | 66.0 | 5.48e-01 | 100.0% | 55.3% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 57.0 | 5.01e-01 | 92.6% | 55.0% |
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.76 | 51.0 | 4.33e-01 | 72.2% | 43.0% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 57.0 | 5.44e-01 | 98.1% | 69.8% |
| 4wcgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 60.0 | 5.80e-01 | 100.0% | 77.0% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.74 | 66.0 | 4.87e-01 | 100.0% | 67.4% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 57.0 | 5.17e-01 | 88.9% | 62.0% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.74 | 66.0 | 4.96e-01 | 100.0% | 77.4% |
| 1s3jA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 57.0 | 5.41e-01 | 98.1% | 70.3% |
| 3dteA02 | 1.10.10.1030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain | 0.74 | 52.0 | 5.66e-01 | 77.8% | 97.6% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.74 | 65.0 | 5.24e-01 | 100.0% | 54.7% |
| 3d5lB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 63.0 | 5.09e-01 | 96.3% | 52.0% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.73 | 50.0 | 4.29e-01 | 88.9% | 45.9% |
| 4cgrB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.73 | 64.0 | 4.40e-01 | 100.0% | 30.9% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.72 | 62.0 | 5.05e-01 | 100.0% | 51.5% |
| 2oi8A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.71 | 63.0 | 4.25e-01 | 100.0% | 29.6% |
| 5mlc900 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.71 | 48.0 | 3.81e-01 | 85.2% | 35.5% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 58.0 | 5.09e-01 | 100.0% | 61.5% |
| 2hyjA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 55.0 | 5.82e-01 | 88.9% | 100.0% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.71 | 61.0 | 5.04e-01 | 98.1% | 71.7% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 55.0 | 5.87e-01 | 94.4% | 97.9% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.70 | 60.0 | 5.29e-01 | 94.4% | 87.3% |
| 1b72A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 60.0 | 5.51e-01 | 96.3% | 73.5% |
| 1le8A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 57.0 | 5.83e-01 | 94.4% | 92.5% |
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.69 | 43.0 | 4.37e-01 | 85.2% | 63.6% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 62.0 | 4.59e-01 | 98.1% | 49.6% |
| 2x26A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.69 | 51.0 | 3.49e-01 | 79.6% | 73.5% |
| 1qbjC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 56.0 | 5.32e-01 | 100.0% | 75.8% |
| 2whnA00 | 1.20.81.30 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F | 0.68 | 61.0 | 4.83e-01 | 100.0% | 83.6% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 58.0 | 5.01e-01 | 98.1% | 61.2% |
| 3d5lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 51.0 | 5.37e-01 | 85.2% | 97.8% |
| 2ld5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 57.0 | 5.38e-01 | 98.1% | 77.6% |
| 1x2nA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 58.0 | 5.64e-01 | 94.4% | 86.7% |
| 2uyyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.68 | 59.0 | 4.55e-01 | 100.0% | 88.6% |
| 2dn0A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 58.0 | 5.17e-01 | 100.0% | 68.4% |
| 2mg4A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 56.0 | 5.28e-01 | 96.3% | 92.4% |
| 2mbgA01 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.66 | 56.0 | 3.89e-01 | 100.0% | 28.1% |
| 2kt0A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 53.0 | 5.63e-01 | 88.9% | 100.0% |
| 2mgqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 55.0 | 5.16e-01 | 100.0% | 88.2% |
| 1e3oC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 50.0 | 5.25e-01 | 87.0% | 93.8% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.65 | 51.0 | 3.85e-01 | 87.0% | 67.7% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 48.0 | 4.25e-01 | 90.7% | 56.6% |
| 2ys9A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 52.0 | 4.77e-01 | 88.9% | 74.3% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.64 | 53.0 | 4.77e-01 | 100.0% | 65.8% |
| 1kxpD02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.63 | 47.0 | 4.00e-01 | 90.7% | 50.0% |
| 1zk8A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 48.0 | 5.08e-01 | 85.2% | 100.0% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 52.0 | 4.64e-01 | 100.0% | 74.4% |
| 1r1dA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 56.0 | 3.57e-01 | 100.0% | 30.6% |
| 1t72A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.61 | 53.0 | 4.10e-01 | 96.3% | 70.1% |
| 4tv7D01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 53.0 | 4.57e-01 | 98.1% | 64.7% |
| 5xdcB01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.60 | 50.0 | 3.99e-01 | 94.4% | 62.2% |
| 3eetA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 53.0 | 5.01e-01 | 100.0% | 84.6% |
| 3zq5A03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.59 | 51.0 | 3.77e-01 | 98.1% | 90.2% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 53.0 | 3.96e-01 | 100.0% | 40.3% |
| 1x2lA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 44.0 | 3.85e-01 | 88.9% | 52.9% |
| 4a18Q01 | 1.10.10.1760 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L36 | 0.58 | 47.0 | 4.48e-01 | 100.0% | 84.1% |
| 3b0pA02 | 1.20.120.1460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 49.0 | 4.43e-01 | 96.3% | 82.7% |
| 2oocB00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.58 | 48.0 | 3.98e-01 | 98.1% | 76.2% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.56 | 47.0 | 4.04e-01 | 92.6% | 82.6% |
| 1vfiA00 | 1.10.246.100 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 | 0.56 | 41.0 | 3.55e-01 | 83.3% | 47.4% |
| 1u5pA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 41.0 | 3.34e-01 | 83.3% | 40.7% |
| 2x1dA02 | 1.10.10.2120 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 49.0 | 4.36e-01 | 94.4% | 87.8% |
| 1kblA04 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.55 | 46.0 | 2.86e-01 | 94.4% | 17.0% |
| 1wxpA01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.54 | 39.0 | 3.42e-01 | 77.8% | 60.7% |
| 2es9A00 | 1.20.1290.30 | Mainly Alpha › Up-down Bundle › AhpD-like › | 0.54 | 45.0 | 3.77e-01 | 96.3% | 60.0% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3503529 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.94 | 67.0 | 7.69e-01 | 77.8% | 100.0% |
| 4995688 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.92 | 77.0 | 7.70e-01 | 90.7% | 87.3% |
| 5052346 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 82.0 | 7.94e-01 | 98.1% | 88.3% |
| 5052031 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 63.0 | 7.10e-01 | 74.1% | 100.0% |
| 5001937 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 76.0 | 7.60e-01 | 92.6% | 90.9% |
| 4189523 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 69.0 | 7.41e-01 | 83.3% | 100.0% |
| 3283752 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.86 | 76.0 | 6.20e-01 | 96.3% | 54.7% |
| 3277968 | 101.1.1.217 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › RsmI_C | 0.86 | 70.0 | 7.01e-01 | 88.9% | 87.3% |
| 3662725 | 101.1.1.217 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › RsmI_C | 0.85 | 67.0 | 6.66e-01 | 85.2% | 81.8% |
| 4949368 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 70.0 | 7.04e-01 | 90.7% | 90.9% |
| 166741 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.84 | 76.0 | 5.96e-01 | 100.0% | 50.9% |
| 149328 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.83 | 56.0 | 3.54e-01 | 70.4% | 15.5% |
| 4961952 | 101.1.1.540 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 | 0.80 | 68.0 | 6.04e-01 | 92.6% | 66.7% |
| 3293154 | 101.1.2.472 ↗ | alpha arrays › HTH › HTH › winged helix domain › A_thal_3526 | 0.80 | 68.0 | 6.62e-01 | 96.3% | 86.7% |
| 4939640 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.79 | 64.0 | 6.24e-01 | 98.1% | 80.0% |
| 3462938 | 101.1.1.269 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7769 | 0.78 | 68.0 | 6.43e-01 | 96.3% | 80.0% |
| 3829115 | 101.1.1.270 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 | 0.78 | 66.0 | 6.19e-01 | 92.6% | 76.9% |
| 4540842 | 101.1.1.2 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC | 0.78 | 66.0 | 4.65e-01 | 96.3% | 30.6% |
| 5006582 | 101.1.1.540 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 | 0.77 | 66.0 | 6.07e-01 | 94.4% | 72.9% |
| 3341091 | 101.35.1.6 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › A_thal_3526 | 0.77 | 68.0 | 6.41e-01 | 100.0% | 83.1% |
| 5022086 | 101.1.1.539 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF434 | 0.76 | 58.0 | 6.12e-01 | 83.3% | 100.0% |
| 4429833 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.76 | 49.0 | 3.82e-01 | 87.0% | 32.7% |
| 3777065 | 101.1.1.89 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding_7 | 0.76 | 65.0 | 6.17e-01 | 96.3% | 93.8% |
| 3412630 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.75 | 67.0 | 4.99e-01 | 100.0% | 45.9% |
| 4981283 | 613.1.1.0 ↗ | alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) | 0.75 | 65.0 | 4.35e-01 | 98.1% | 26.2% |
| 4996152 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.75 | 65.0 | 5.50e-01 | 98.1% | 94.4% |
| 3815398 | 101.1.1.253 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N | 0.75 | 63.0 | 5.09e-01 | 96.3% | 50.0% |
| 4110549 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.75 | 48.0 | 3.79e-01 | 87.0% | 32.7% |
| 5078899 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.75 | 65.0 | 5.20e-01 | 100.0% | 51.8% |
| 3466087 | 101.1.1.253 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N | 0.74 | 61.0 | 6.29e-01 | 94.4% | 98.0% |
| 3575981 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.74 | 67.0 | 5.81e-01 | 100.0% | 100.0% |
| 4941656 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 62.0 | 5.57e-01 | 100.0% | 68.8% |
| 3603105 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 62.0 | 5.52e-01 | 100.0% | 66.7% |
| 4600685 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.73 | 63.0 | 4.63e-01 | 96.3% | 64.3% |
| 4944767 | 101.1.2.883 ↗ | alpha arrays › HTH › HTH › winged helix domain › Radical_SAM | 0.73 | 56.0 | 5.10e-01 | 85.2% | 61.3% |
| 3909225 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.73 | 62.0 | 5.02e-01 | 100.0% | 55.5% |
| 4434935 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.73 | 64.0 | 4.72e-01 | 100.0% | 67.1% |
| 4240067 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.73 | 59.0 | 5.44e-01 | 96.3% | 70.7% |
| 3587870 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.72 | 62.0 | 4.94e-01 | 96.3% | 63.6% |
| 5077699 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.72 | 63.0 | 4.14e-01 | 100.0% | 95.3% |
| 3262509 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 65.0 | 5.45e-01 | 100.0% | 65.6% |
| 2545 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 63.0 | 5.57e-01 | 100.0% | 75.9% |
| 3707222 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 62.0 | 6.25e-01 | 96.3% | 94.5% |
| 4569734 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.71 | 57.0 | 4.37e-01 | 90.7% | 66.2% |
| 3944885 | 101.1.1.355 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF2857 | 0.71 | 58.0 | 5.51e-01 | 90.7% | 80.0% |
| 3243454 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 56.0 | 5.46e-01 | 94.4% | 78.3% |
| 3882807 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.71 | 62.0 | 5.39e-01 | 100.0% | 65.0% |
| 4934782 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.71 | 60.0 | 4.06e-01 | 100.0% | 46.4% |
| 3365751 | 101.1.1.253 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N | 0.70 | 57.0 | 5.42e-01 | 94.4% | 75.4% |
| 5042980 | 101.35.1.41 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › PF26555 | 0.70 | 56.0 | 5.81e-01 | 96.3% | 100.0% |
| 4997858 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.70 | 56.0 | 3.97e-01 | 88.9% | 61.2% |
| 3454275 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.70 | 59.0 | 6.08e-01 | 94.4% | 98.0% |
| 3215991 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 63.0 | 5.95e-01 | 100.0% | 92.3% |
| 3732279 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.70 | 47.0 | 4.55e-01 | 70.4% | 83.3% |
| 3574083 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.69 | 53.0 | 5.77e-01 | 87.0% | 100.0% |
| 5075678 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.69 | 57.0 | 3.85e-01 | 94.4% | 100.0% |
| 4983508 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 54.0 | 4.98e-01 | 87.0% | 71.4% |
| 3222400 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.69 | 58.0 | 5.05e-01 | 100.0% | 60.0% |
| 3760172 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 59.0 | 5.17e-01 | 98.1% | 65.0% |
| 4945647 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.68 | 57.0 | 4.70e-01 | 94.4% | 56.0% |
| 4948165 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.68 | 59.0 | 4.74e-01 | 100.0% | 51.8% |
| 3993676 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.68 | 60.0 | 4.83e-01 | 100.0% | 55.2% |
| 4556778 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.68 | 59.0 | 4.68e-01 | 100.0% | 54.8% |
| 3738683 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 54.0 | 5.40e-01 | 90.7% | 100.0% |
| 4975400 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.67 | 58.0 | 4.61e-01 | 100.0% | 49.6% |
| 5060030 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.67 | 47.0 | 3.29e-01 | 90.7% | 22.2% |
| 4957080 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 56.0 | 5.66e-01 | 96.3% | 94.5% |
| 5046018 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 57.0 | 5.06e-01 | 100.0% | 72.5% |
| 5021144 | 101.1.1.545 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF1699 | 0.66 | 49.0 | 4.94e-01 | 94.4% | 81.8% |
| 5073390 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 56.0 | 4.39e-01 | 100.0% | 46.4% |
| 3979215 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 55.0 | 5.56e-01 | 92.6% | 96.4% |
| 3241028 | 101.1.2.649 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF28730 | 0.66 | 56.0 | 4.93e-01 | 100.0% | 70.6% |
| 4952257 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.65 | 59.0 | 4.69e-01 | 100.0% | 76.9% |
| 3777242 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.64 | 55.0 | 4.35e-01 | 100.0% | 49.2% |
| 3947986 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.64 | 56.0 | 5.48e-01 | 100.0% | 91.7% |
| 3212897 | 198.1.1.1 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 | 0.64 | 51.0 | 4.72e-01 | 96.3% | 96.0% |
| 5019592 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.63 | 53.0 | 3.59e-01 | 100.0% | 42.2% |
| 5004578 | 101.1.1.545 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF1699 | 0.62 | 51.0 | 4.97e-01 | 96.3% | 85.0% |
| 4497098 | 3291.1.1.195 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › H-kinase_dim | 0.61 | 50.0 | 3.78e-01 | 87.0% | 97.5% |
| 3509826 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.57 | 52.0 | 3.87e-01 | 100.0% | 76.2% |
| 3235055 | 3065.1.1.2 ↗ | alpha bundles › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Gp-FAR-1 | 0.57 | 47.0 | 3.44e-01 | 94.4% | 49.7% |
| 4028620 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 45.0 | 3.34e-01 | 96.3% | 60.6% |
| 3484930 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.55 | 46.0 | 3.77e-01 | 94.4% | 80.0% |
| 3871543 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.53 | 45.0 | 3.48e-01 | 96.3% | 65.4% |
| 3245973 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 40.0 | 2.45e-01 | 96.3% | 31.6% |