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IMGVR_UViG_3300000558_002443-3300000558-Draft_1001693512

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300000558_002443-3300000558-Draft_1001693512 ↗
Kingdom:: archaea

Quality

83.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-48

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6e94A02	3.30.160.60	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger	0.59	42.0	3.99e-01	100.0%	62.5%
2xgvA00	1.10.375.10	Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein	0.56	38.0	2.76e-01	71.7%	88.7%
6ioyC02	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.55	41.0	2.77e-01	82.6%	25.4%
2damA00	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.54	37.0	3.37e-01	71.7%	73.1%
2xguB00	1.10.375.10	Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein	0.53	36.0	2.65e-01	73.9%	38.1%
1x6aA01	2.10.110.10	Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein	0.52	43.0	3.99e-01	100.0%	90.3%
5undA01	3.30.160.60	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger	0.51	36.0	3.45e-01	95.7%	64.8%
2a25A01	3.30.160.60	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger	0.51	32.0	3.49e-01	71.7%	100.0%

ECOD (22)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3435613	3014.1.1.3 ↗	alpha duplicates or obligate multimers › Middle operon regulator dimerization domain › Middle operon regulator dimerization domain › Middle operon regulator dimerization domain › DUF1677	0.85	75.0	6.63e-01	100.0%	69.2%
3420417	102.1.1.117 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DUF1677	0.83	71.0	6.36e-01	97.8%	67.7%
3678066	101.1.11.40 ↗	alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF1677	0.83	71.0	6.20e-01	100.0%	64.3%
3334924	101.1.11.40 ↗	alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF1677	0.78	65.0	5.50e-01	100.0%	56.2%
3416649	386.1.1.1 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2	0.59	36.0	3.45e-01	73.9%	50.9%
3573700	386.1.1.1 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2	0.58	35.0	3.41e-01	71.7%	54.0%
3247107	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.58	34.0	3.97e-01	71.7%	90.0%
3629992	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.58	37.0	3.74e-01	97.8%	66.7%
3841395	386.1.1.233 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2	0.57	35.0	2.97e-01	93.5%	35.0%
4025961	108.1.1.26 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5	0.57	42.0	3.46e-01	82.6%	86.7%
3874785	386.1.1.245 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2, zf-C2H2_6	0.57	40.0	3.41e-01	100.0%	43.8%
3535928	386.1.1.1 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2	0.56	34.0	3.15e-01	71.7%	45.0%
140763	170.2.1.0 ↗	alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain	0.56	38.0	2.76e-01	71.7%	88.7%
4588148	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.55	34.0	3.68e-01	71.7%	71.1%
3241716	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.55	37.0	3.45e-01	100.0%	55.0%
3398689	386.1.1.1 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2	0.54	41.0	3.68e-01	82.6%	61.5%
3524054	386.1.1.1 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2	0.53	34.0	3.69e-01	95.7%	100.0%
4964333	375.1.1.339 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7560	0.53	34.0	3.53e-01	84.8%	77.5%
3517185	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.52	37.0	2.88e-01	97.8%	33.3%
3414474	386.1.1.1 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2	0.52	38.0	3.65e-01	80.4%	70.9%
3756486	386.1.1.1 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2	0.52	38.0	3.71e-01	84.8%	70.9%
3217818	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.52	33.0	3.28e-01	91.3%	60.0%