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IMGVR_UViG_3300000574_000018-3300000574-JGI1357J11328_1000159414
Arc-VirIMGVR_UViG_3300000574_000018-3300000574-JGI1357J11328_1000159414
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-90
Domain cluster:
rep: IMGVR_UViG_3300005095_000166-3300005095-Ga0072504_15106112__D6-95
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bx8A04 | 1.25.40.850 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Sec1/Munc18 (SM) protein, domain 3b | 0.58 | 38.0 | 3.55e-01 | 93.2% | 54.3% |
| 3n40P01 | 1.10.287.2230 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 32.0 | 3.46e-01 | 100.0% | 71.4% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 47.0 | 4.26e-01 | 100.0% | 83.3% |
| 3fmcC01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 43.0 | 2.96e-01 | 93.2% | 64.1% |
| 4fybA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 38.0 | 2.99e-01 | 75.3% | 69.6% |
| 3etvA02 | 1.20.58.2230 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Retrograde transport protein Dsl1, N-terminal domain | 0.53 | 38.0 | 2.66e-01 | 74.0% | 50.2% |
| 2efeA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.52 | 41.0 | 4.01e-01 | 86.3% | 96.3% |
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.51 | 31.0 | 3.47e-01 | 97.3% | 86.0% |
| 2bxhA06 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.51 | 37.0 | 3.89e-01 | 83.6% | 86.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3591491 | 189.1.1.0 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP | 0.56 | 49.0 | 3.57e-01 | 100.0% | 43.2% |
| 3481669 | 284.1.1.5 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Gcd10p | 0.53 | 38.0 | 3.13e-01 | 83.6% | 41.5% |
| 1834540 | 284.1.1.5 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Gcd10p | 0.52 | 38.0 | 3.11e-01 | 78.1% | 42.4% |
| 3268814 | 298.1.1.15 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Sacchrp_dh_C | 0.51 | 44.0 | 3.12e-01 | 98.6% | 69.8% |