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IMGVR_UViG_3300000574_000018-3300000574-JGI1357J11328_1000159418
Arc-VirIMGVR_UViG_3300000574_000018-3300000574-JGI1357J11328_1000159418
Identity
- Kingdom:
- archaea
Quality
47.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 194-216_352-408
D2
high
residues 220-348
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.67 | 42.0 | 4.50e-01 | 78.3% | 72.7% |
| 4madA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 37.0 | 3.70e-01 | 76.7% | 55.2% |
| 3qnfC01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.61 | 47.0 | 4.00e-01 | 89.1% | 50.7% |
| 3d3aA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 36.0 | 3.62e-01 | 79.8% | 56.7% |
| 4fkeA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.59 | 48.0 | 3.94e-01 | 89.1% | 49.5% |
| 4e8dA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 36.0 | 3.58e-01 | 79.1% | 55.8% |
| 3irpX02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 47.0 | 4.49e-01 | 85.3% | 89.9% |
| 2zuvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 45.0 | 5.00e-01 | 83.7% | 100.0% |
| 4wz9A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.57 | 46.0 | 3.86e-01 | 87.6% | 50.9% |
| 6ea2A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.56 | 46.0 | 3.98e-01 | 85.3% | 68.4% |
| 4p02B01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 39.0 | 3.90e-01 | 86.8% | 71.4% |
| 3abzA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 37.0 | 3.46e-01 | 82.9% | 55.8% |
| 2x12A01 | 2.60.40.2010 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 37.0 | 3.29e-01 | 85.3% | 49.5% |
| 6sk6A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 36.0 | 2.90e-01 | 70.5% | 70.0% |
| 2vm9A02 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 37.0 | 4.16e-01 | 81.4% | 99.0% |
| 2ww8A02 | 2.60.40.2110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 3.61e-01 | 86.8% | 72.7% |
| 3wirA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.51 | 42.0 | 3.37e-01 | 88.4% | 75.3% |
| 4fx5A01 | 2.60.40.3670 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 4.04e-01 | 86.8% | 83.1% |
| 3w5mA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 35.0 | 3.08e-01 | 82.9% | 46.7% |
| 4g2aA01 | 2.60.40.3680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 43.0 | 3.55e-01 | 93.8% | 100.0% |
| 8ci9C01 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.50 | 38.0 | 2.91e-01 | 79.8% | 42.7% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4049733 | 3071.1.1.8 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › YQBQ | 0.87 | 37.0 | 5.34e-01 | 100.0% | 83.1% |
| 4957567 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.77 | 37.0 | 4.97e-01 | 100.0% | 85.7% |
| 4989577 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.63 | 41.0 | 4.31e-01 | 85.3% | 71.7% |
| 1346395 | 10.32.1.73 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 | 0.63 | 37.0 | 3.48e-01 | 76.7% | 47.4% |
| 3509982 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.61 | 49.0 | 4.30e-01 | 91.5% | 58.9% |
| 3568250 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.60 | 49.0 | 3.94e-01 | 93.8% | 46.8% |
| 3744032 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.58 | 46.0 | 4.48e-01 | 84.5% | 88.3% |
| 4471982 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.57 | 48.0 | 3.91e-01 | 88.4% | 67.0% |
| 5038375 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.57 | 48.0 | 4.12e-01 | 89.1% | 69.5% |
| 4225090 | 2002.1.1.160 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Lact_bio_phlase | 0.57 | 53.0 | 3.60e-01 | 99.2% | 33.3% |
| 4856461 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.57 | 47.0 | 3.89e-01 | 93.0% | 50.9% |
| 4546062 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.56 | 47.0 | 3.86e-01 | 89.1% | 64.9% |
| 3230128 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.55 | 47.0 | 3.93e-01 | 91.5% | 83.2% |
| 4963502 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.55 | 44.0 | 4.39e-01 | 85.3% | 91.1% |
| 143140 | 11.1.5.38 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › SdrG_C_C | 0.55 | 46.0 | 4.10e-01 | 89.9% | 83.0% |
| 3936582 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.54 | 46.0 | 3.86e-01 | 91.5% | 69.1% |
| 2497009 | 10.2.1.41 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_NCLDV | 0.54 | 42.0 | 3.70e-01 | 83.7% | 99.0% |
| 4272976 | 5095.1.1.1 ↗ | beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 | 0.54 | 37.0 | 3.58e-01 | 82.2% | 62.1% |
| 4020475 | 5095.1.1.1 ↗ | beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 | 0.54 | 38.0 | 3.54e-01 | 83.7% | 58.7% |
| 3743891 | 5095.1.1.1 ↗ | beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 | 0.53 | 37.0 | 3.48e-01 | 82.2% | 58.1% |
| 3592899 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.53 | 44.0 | 3.67e-01 | 87.6% | 65.1% |
| 4145033 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 36.0 | 3.44e-01 | 83.7% | 60.7% |
| 4174868 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.52 | 47.0 | 2.91e-01 | 100.0% | 45.4% |
| 3785376 | 5095.1.1.1 ↗ | beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 | 0.52 | 36.0 | 3.37e-01 | 81.4% | 57.0% |
| 5060997 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 36.0 | 3.30e-01 | 82.9% | 53.7% |
| 4367626 | 12.3.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N | 0.51 | 41.0 | 3.27e-01 | 86.8% | 78.1% |
| 11179 | 2484.1.1.27 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › SHS2_FTSA | 0.51 | 41.0 | 3.59e-01 | 86.0% | 76.7% |
| 4242887 | 5095.1.1.1 ↗ | beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 | 0.50 | 36.0 | 3.39e-01 | 86.0% | 60.0% |
| 3396334 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 37.0 | 3.64e-01 | 89.1% | 71.4% |
D3
high
residues 413-473_508-562
D4
medium
residues 8-68
D5
medium
residues 113-189