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IMGVR_UViG_3300000594_000001-3300000594-Draft_1000110
Arc-VirIMGVR_UViG_3300000594_000001-3300000594-Draft_1000110
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-41
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2otrA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.66 | 50.0 | 3.90e-01 | 85.0% | 93.3% |
| 3fjyA02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.65 | 53.0 | 3.56e-01 | 100.0% | 30.2% |
| 2lstA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.62 | 42.0 | 3.06e-01 | 100.0% | 22.3% |
| 5cw7B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.58 | 42.0 | 3.34e-01 | 82.5% | 89.4% |
| 1vq8X00 | 3.10.440.10 | Alpha Beta › Roll › Ribosomal Protein L31e; Chain: W; › Ribosomal protein L31 | 0.56 | 46.0 | 3.79e-01 | 100.0% | 69.5% |
| 1dg6A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 40.0 | 2.91e-01 | 90.0% | 87.2% |
| 3q8dA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 45.0 | 3.74e-01 | 100.0% | 85.7% |
| 3nyiA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.54 | 43.0 | 3.07e-01 | 100.0% | 28.5% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.52 | 38.0 | 2.78e-01 | 87.5% | 40.1% |
| 7zhhA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 40.0 | 3.60e-01 | 100.0% | 74.2% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3276550 | 4312.2.1.0 ↗ | a+b two layers › RelE-like › YaeB-like › YaeB-like | 0.63 | 47.0 | 3.76e-01 | 87.5% | 97.8% |
| 2141157 | 59.1.1.4 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Ctf8 | 0.62 | 49.0 | 3.37e-01 | 87.5% | 89.4% |
| 4983913 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.60 | 47.0 | 3.08e-01 | 100.0% | 28.3% |
| 3978800 | 4212.1.1.1 ↗ | beta barrels › FimD N-terminal domain-like › FimD N-terminal domain-like › FimD N-terminal domain-like › PapC_N | 0.60 | 43.0 | 3.30e-01 | 90.0% | 71.2% |
| 4944129 | 301.13.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain | 0.57 | 46.0 | 3.39e-01 | 100.0% | 31.5% |
| 4209293 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.57 | 49.0 | 3.94e-01 | 100.0% | 61.3% |
| 4463034 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.56 | 47.0 | 3.90e-01 | 100.0% | 88.0% |
| 4065350 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.55 | 46.0 | 3.83e-01 | 100.0% | 82.7% |
| 4592339 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.54 | 46.0 | 4.19e-01 | 100.0% | 90.9% |
| 3712231 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 37.0 | 2.82e-01 | 80.0% | 70.3% |
| 4949050 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.53 | 41.0 | 3.70e-01 | 92.5% | 78.3% |
| 3240790 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 43.0 | 3.73e-01 | 100.0% | 95.4% |
| 3716983 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.50 | 40.0 | 3.36e-01 | 100.0% | 51.2% |