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IMGVR_UViG_3300000594_000001-3300000594-Draft_100013

Arc-Vir

IMGVR_UViG_3300000594_000001-3300000594-Draft_100013

Identity

Kingdom:
archaea

Quality

84.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 48-116
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1io1A02 2.170.280.10 Mainly Beta › Beta Complex › f41 fragment of flagellin, middle domain › f41 fragment of flagellin, middle domain 0.65 49.0 3.91e-01 79.7% 84.0%
4v19400 6.20.130.20 Special › Other non-globular › Ribosomal Protein L25; Chain P › Mitochondrial ribosomal protein L55 0.57 29.0 3.44e-01 89.9% 68.9%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 35.0 3.80e-01 85.5% 81.8%
3mhzA03 3.10.20.110 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.54 40.0 3.44e-01 81.2% 68.1%
5iroD00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 30.0 2.71e-01 73.9% 35.3%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4526589 6.1.1.4 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin 0.55 40.0 3.35e-01 81.2% 81.5%
3511891 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.52 33.0 3.45e-01 94.2% 71.7%
3805766 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.52 36.0 3.90e-01 87.0% 90.9%
3199118 3751.1.1.1 extended segments › Antiviral helicase Ski2 N-terminal extended region › Antiviral helicase Ski2 N-terminal extended region › Antiviral helicase Ski2 N-terminal extended region › Ski2_N 0.51 33.0 2.45e-01 81.2% 23.2%