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IMGVR_UViG_3300000873_000012-3300000873-JGI12451J12833_100028514
Arc-VirIMGVR_UViG_3300000873_000012-3300000873-JGI12451J12833_100028514
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-145
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mj7A00 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.62 | 38.0 | 3.85e-01 | 91.7% | 62.4% |
| 3lydA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.56 | 38.0 | 3.85e-01 | 75.9% | 69.7% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.56 | 35.0 | 4.01e-01 | 88.3% | 84.3% |
| 2lm3A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.56 | 39.0 | 3.51e-01 | 100.0% | 50.2% |
| 1x99A00 | 2.60.270.20 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin | 0.54 | 44.0 | 4.49e-01 | 87.6% | 96.6% |
| 3cebA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.52 | 30.0 | 3.70e-01 | 100.0% | 92.9% |
| 2h2yA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 36.0 | 3.90e-01 | 88.3% | 88.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3572958 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.63 | 27.0 | 4.14e-01 | 84.8% | 98.3% |
| 1154020 | 4020.1.1.0 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes | 0.53 | 30.0 | 3.75e-01 | 99.3% | 94.0% |
D2
medium
residues 146-295
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wssA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.57 | 30.0 | 3.75e-01 | 78.0% | 82.8% |
| 7oo1A01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.53 | 24.0 | 3.31e-01 | 91.3% | 84.4% |
| 1tfkA00 | 3.10.450.200 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 29.0 | 3.49e-01 | 98.0% | 85.1% |