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IMGVR_UViG_3300000873_000012-3300000873-JGI12451J12833_10002855
Arc-VirIMGVR_UViG_3300000873_000012-3300000873-JGI12451J12833_10002855
Identity
- Kingdom:
- archaea
Quality
57.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 175-214_247-321
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.60 | 39.0 | 4.34e-01 | 97.4% | 85.2% |
| 3hd6A00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.60 | 48.0 | 3.27e-01 | 100.0% | 24.6% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.59 | 37.0 | 4.19e-01 | 94.8% | 83.9% |
| 4kk2B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.53 | 43.0 | 3.11e-01 | 87.0% | 67.9% |
| 2imsA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.53 | 43.0 | 3.79e-01 | 84.3% | 76.7% |
| 3kp9A01 | 1.20.1440.130 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain | 0.51 | 43.0 | 3.89e-01 | 94.8% | 100.0% |
| 4wqoD00 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.51 | 35.0 | 3.32e-01 | 71.3% | 69.5% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 30.0 | 3.39e-01 | 96.5% | 78.3% |
| 1h99A01 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.50 | 37.0 | 3.93e-01 | 88.7% | 86.5% |
| 3p9dG01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.50 | 41.0 | 3.20e-01 | 88.7% | 72.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4934758 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.51 | 36.0 | 3.13e-01 | 71.3% | 86.1% |
| 3882568 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 39.0 | 3.23e-01 | 100.0% | 45.9% |
| 5039572 | 5048.1.1.2 ↗ | alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like › Form_Nir_trans | 0.50 | 38.0 | 3.01e-01 | 82.6% | 96.6% |