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IMGVR_UViG_3300000885_000002-3300000885-JGI12445J12830_100040414
Arc-VirIMGVR_UViG_3300000885_000002-3300000885-JGI12445J12830_100040414
Identity
- Kingdom:
- archaea
Quality
84.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 199-273
Domain cluster:
rep: OP056089.1__UYD72102.1__X__00002__D5-102
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13392.13 best | HNH_3 | 37.3 | 2.20e-09 | 65.3% | 63.0% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.80 | 72.0 | 6.35e-01 | 100.0% | 68.9% |
| 1a73A00 | 3.90.75.10 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A | 0.66 | 59.0 | 4.60e-01 | 100.0% | 57.4% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.60 | 26.0 | 3.05e-01 | 77.3% | 51.8% |
| 4bbyA02 | 3.30.160.650 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 26.0 | 3.23e-01 | 76.0% | 68.2% |
| 3bqxA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 33.0 | 2.75e-01 | 93.3% | 30.2% |
| 1b69A00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.53 | 31.0 | 3.22e-01 | 84.0% | 60.9% |
| 3h7jA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 37.0 | 3.42e-01 | 77.3% | 80.9% |
| 1djxA02 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.52 | 40.0 | 2.65e-01 | 81.3% | 23.2% |
| 3p9dE01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.51 | 42.0 | 2.99e-01 | 94.7% | 78.5% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3266965 | 378.1.2.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › Inactive Tox-GHH domain of teneurin › HNH_3 | 0.87 | 71.0 | 7.63e-01 | 92.0% | 100.0% |
| 3965202 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.82 | 66.0 | 5.79e-01 | 98.7% | 59.1% |
| 5053631 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.81 | 73.0 | 6.37e-01 | 97.3% | 90.0% |
| 3586841 | 378.1.1.7 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 | 0.80 | 74.0 | 6.27e-01 | 100.0% | 64.3% |
| 3539740 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.76 | 70.0 | 5.80e-01 | 100.0% | 62.4% |
| 4303143 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.74 | 50.0 | 4.87e-01 | 89.3% | 62.4% |
| 89916 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.69 | 60.0 | 4.66e-01 | 100.0% | 44.4% |
| 3695527 | 378.1.1.6 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon | 0.68 | 60.0 | 5.12e-01 | 97.3% | 65.0% |
| 4949181 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.67 | 52.0 | 5.22e-01 | 89.3% | 81.3% |
| 8233 | 378.1.1.6 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon | 0.66 | 59.0 | 4.60e-01 | 100.0% | 57.4% |
| 3209905 | 5.1.12.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains | 0.53 | 40.0 | 2.65e-01 | 82.7% | 39.7% |
| 3408206 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.51 | 39.0 | 3.12e-01 | 84.0% | 86.9% |
| 385851 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.51 | 36.0 | 3.05e-01 | 76.0% | 97.7% |
| 4928472 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.50 | 29.0 | 2.89e-01 | 89.3% | 50.0% |
D2
medium
residues 33-72
Domain cluster:
representative
CATH (85)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c57B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 73.0 | 6.85e-01 | 95.0% | 75.5% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 71.0 | 6.27e-01 | 100.0% | 62.1% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 73.0 | 6.09e-01 | 100.0% | 55.2% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 74.0 | 5.82e-01 | 95.0% | 47.5% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 74.0 | 5.38e-01 | 95.0% | 36.2% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 72.0 | 6.17e-01 | 95.0% | 60.9% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 72.0 | 6.53e-01 | 100.0% | 70.4% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 72.0 | 6.19e-01 | 100.0% | 60.3% |
| 1ku3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 74.0 | 6.43e-01 | 97.5% | 68.9% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 68.0 | 6.04e-01 | 95.0% | 62.1% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 70.0 | 5.79e-01 | 97.5% | 52.9% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.84 | 70.0 | 4.76e-01 | 95.0% | 26.8% |
| 2q0oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 70.0 | 5.87e-01 | 100.0% | 55.2% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 69.0 | 5.94e-01 | 97.5% | 58.5% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 68.0 | 5.63e-01 | 97.5% | 51.4% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 68.0 | 6.09e-01 | 100.0% | 66.1% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 68.0 | 5.97e-01 | 97.5% | 62.3% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.82 | 65.0 | 5.96e-01 | 100.0% | 66.7% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 65.0 | 5.14e-01 | 95.0% | 42.5% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 67.0 | 5.78e-01 | 97.5% | 58.7% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 66.0 | 5.32e-01 | 100.0% | 46.3% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 68.0 | 5.53e-01 | 95.0% | 50.7% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.81 | 64.0 | 6.23e-01 | 100.0% | 80.0% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.81 | 65.0 | 4.13e-01 | 95.0% | 18.0% |
| 3cecA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.81 | 68.0 | 5.12e-01 | 95.0% | 40.7% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 65.0 | 5.74e-01 | 95.0% | 61.7% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.80 | 66.0 | 4.52e-01 | 97.5% | 27.0% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.80 | 71.0 | 6.34e-01 | 100.0% | 82.1% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 64.0 | 5.20e-01 | 95.0% | 47.4% |
| 3vwbA00 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.80 | 71.0 | 5.03e-01 | 100.0% | 36.2% |
| 3op9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 67.0 | 5.57e-01 | 92.5% | 55.9% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.80 | 63.0 | 5.73e-01 | 100.0% | 65.5% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.78 | 66.0 | 4.89e-01 | 100.0% | 36.7% |
| 2llkA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 63.0 | 6.30e-01 | 100.0% | 90.2% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.78 | 65.0 | 4.91e-01 | 97.5% | 39.2% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 64.0 | 5.02e-01 | 92.5% | 45.1% |
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 66.0 | 5.56e-01 | 95.0% | 59.1% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 66.0 | 5.95e-01 | 100.0% | 70.9% |
| 4u7bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 65.0 | 6.59e-01 | 100.0% | 97.4% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 63.0 | 4.93e-01 | 97.5% | 43.2% |
| 3bs3A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.76 | 60.0 | 5.31e-01 | 90.0% | 61.7% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 66.0 | 5.70e-01 | 100.0% | 65.1% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 69.0 | 5.32e-01 | 100.0% | 61.0% |
| 2auwB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.76 | 61.0 | 5.14e-01 | 92.5% | 57.1% |
| 3ivpD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 64.0 | 5.19e-01 | 95.0% | 54.7% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 64.0 | 5.82e-01 | 100.0% | 72.2% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 61.0 | 5.76e-01 | 97.5% | 76.0% |
| 4yg1A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 62.0 | 5.11e-01 | 92.5% | 51.4% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 58.0 | 4.61e-01 | 95.0% | 41.6% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.74 | 58.0 | 4.55e-01 | 100.0% | 39.4% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.73 | 58.0 | 5.11e-01 | 95.0% | 61.5% |
| 1wi9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 60.0 | 5.38e-01 | 100.0% | 65.5% |
| 1ojlA03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 57.0 | 5.54e-01 | 92.5% | 78.7% |
| 1s3jA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 61.0 | 5.30e-01 | 100.0% | 60.9% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 59.0 | 5.16e-01 | 100.0% | 60.3% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 60.0 | 5.25e-01 | 100.0% | 61.9% |
| 3dv8A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 64.0 | 5.09e-01 | 100.0% | 55.1% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.72 | 60.0 | 4.27e-01 | 100.0% | 29.8% |
| 5xe7A01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.72 | 59.0 | 4.14e-01 | 100.0% | 59.2% |
| 7vjmB01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 59.0 | 5.13e-01 | 95.0% | 71.9% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 60.0 | 4.46e-01 | 100.0% | 37.5% |
| 3f8mA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 62.0 | 5.27e-01 | 100.0% | 66.2% |
| 5f7qC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 58.0 | 4.94e-01 | 100.0% | 55.7% |
| 1lliA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 59.0 | 4.53e-01 | 92.5% | 49.4% |
| 1b0nA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 56.0 | 4.26e-01 | 95.0% | 37.9% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 58.0 | 4.98e-01 | 100.0% | 58.2% |
| 2d1hB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 59.0 | 4.54e-01 | 100.0% | 40.8% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.69 | 58.0 | 3.60e-01 | 100.0% | 91.8% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 55.0 | 3.91e-01 | 100.0% | 27.7% |
| 4o5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 57.0 | 4.84e-01 | 100.0% | 60.6% |
| 3g7dA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 55.0 | 4.41e-01 | 95.0% | 64.0% |
| 3mczA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 56.0 | 4.51e-01 | 95.0% | 46.3% |
| 2hyjA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 55.0 | 5.29e-01 | 92.5% | 91.3% |
| 2y75A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 56.0 | 4.01e-01 | 100.0% | 57.6% |
| 1mkmB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 55.0 | 4.59e-01 | 100.0% | 52.6% |
| 1repC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 3.79e-01 | 95.0% | 39.0% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 4.49e-01 | 100.0% | 56.6% |
| 2x26A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.64 | 54.0 | 3.52e-01 | 100.0% | 73.0% |
| 5wxuD01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 53.0 | 3.24e-01 | 92.5% | 19.7% |
| 3nnrA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 53.0 | 3.42e-01 | 100.0% | 25.2% |
| 2de2A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.61 | 51.0 | 3.29e-01 | 95.0% | 67.5% |
| 2pjpA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 47.0 | 4.33e-01 | 97.5% | 68.9% |
| 3kglB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 48.0 | 3.06e-01 | 92.5% | 61.4% |
| 3lmmC04 | 1.10.10.2340 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.60 | 44.0 | 3.77e-01 | 97.5% | 46.0% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 47.0 | 4.16e-01 | 100.0% | 71.6% |
ECOD (95)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4938253 | 101.1.1.9 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 | 1.00 | 85.0 | 8.53e-01 | 90.0% | 90.0% |
| 5058447 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.98 | 83.0 | 7.28e-01 | 90.0% | 65.5% |
| 5030025 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.97 | 84.0 | 7.69e-01 | 92.5% | 74.0% |
| 4340270 | 101.1.2.5 ↗ | alpha arrays › HTH › HTH › winged helix domain › Crp | 0.92 | 78.0 | 7.48e-01 | 97.5% | 82.2% |
| 3284984 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.91 | 79.0 | 4.72e-01 | 95.0% | 15.0% |
| 4388780 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.91 | 79.0 | 5.22e-01 | 95.0% | 26.2% |
| 3288971 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.90 | 78.0 | 5.13e-01 | 95.0% | 25.3% |
| 4238054 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.90 | 77.0 | 4.65e-01 | 95.0% | 15.5% |
| None | — | 0.90 | 77.0 | 5.48e-01 | 95.0% | 34.5% | |
| 3974736 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 77.0 | 5.89e-01 | 95.0% | 45.9% |
| 4202221 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.89 | 76.0 | 6.32e-01 | 95.0% | 55.9% |
| 2817645 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.89 | 77.0 | 6.01e-01 | 95.0% | 47.5% |
| 4233279 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.89 | 76.0 | 4.59e-01 | 95.0% | 16.2% |
| 3873677 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.89 | 74.0 | 6.10e-01 | 100.0% | 52.9% |
| 4577850 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.89 | 76.0 | 5.59e-01 | 97.5% | 38.4% |
| 4497189 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.88 | 75.0 | 6.36e-01 | 95.0% | 60.0% |
| 4304581 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.88 | 75.0 | 5.61e-01 | 95.0% | 40.4% |
| 4876274 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.88 | 75.0 | 6.44e-01 | 95.0% | 61.3% |
| 4160122 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.88 | 75.0 | 4.98e-01 | 95.0% | 26.0% |
| 4520564 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.88 | 75.0 | 5.91e-01 | 97.5% | 47.5% |
| 4663875 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.87 | 74.0 | 4.50e-01 | 95.0% | 16.2% |
| 4470607 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.87 | 73.0 | 5.21e-01 | 95.0% | 33.0% |
| 4032673 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 74.0 | 4.44e-01 | 97.5% | 15.5% |
| 4372550 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.87 | 74.0 | 5.60e-01 | 97.5% | 42.2% |
| 4146353 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.86 | 73.0 | 5.78e-01 | 95.0% | 47.5% |
| 4944726 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 73.0 | 6.39e-01 | 100.0% | 63.3% |
| 3971149 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.86 | 73.0 | 5.78e-01 | 100.0% | 47.5% |
| 3951829 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.86 | 73.0 | 5.65e-01 | 97.5% | 44.7% |
| 4963466 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.86 | 75.0 | 7.26e-01 | 97.5% | 86.7% |
| 3961841 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.86 | 75.0 | 6.20e-01 | 100.0% | 55.7% |
| 3941460 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.86 | 71.0 | 6.04e-01 | 100.0% | 56.9% |
| 4997411 | 101.1.3.33 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 | 0.86 | 72.0 | 5.72e-01 | 97.5% | 47.5% |
| 4237551 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.86 | 72.0 | 5.42e-01 | 97.5% | 40.0% |
| 3284469 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.85 | 72.0 | 5.82e-01 | 100.0% | 50.7% |
| 3587538 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.85 | 71.0 | 5.98e-01 | 97.5% | 55.9% |
| 3944309 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.85 | 70.0 | 6.55e-01 | 97.5% | 74.0% |
| 3589532 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 71.0 | 5.32e-01 | 100.0% | 38.8% |
| 4486973 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.85 | 71.0 | 5.54e-01 | 95.0% | 44.7% |
| 5057202 | 101.1.3.8 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 | 0.85 | 71.0 | 5.84e-01 | 100.0% | 52.9% |
| 3967675 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.85 | 72.0 | 6.68e-01 | 97.5% | 76.0% |
| 3969641 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.85 | 71.0 | 5.65e-01 | 95.0% | 48.8% |
| 4947436 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 71.0 | 6.42e-01 | 97.5% | 69.1% |
| 4165188 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.84 | 71.0 | 5.52e-01 | 100.0% | 44.7% |
| 2448404 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.84 | 70.0 | 6.16e-01 | 97.5% | 63.3% |
| 3587755 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.84 | 75.0 | 5.16e-01 | 100.0% | 45.4% |
| 4396640 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.84 | 71.0 | 4.99e-01 | 100.0% | 31.7% |
| 3969325 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.84 | 70.0 | 5.85e-01 | 100.0% | 54.3% |
| 4303963 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.84 | 70.0 | 5.68e-01 | 97.5% | 50.7% |
| 3972638 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.84 | 70.0 | 5.96e-01 | 100.0% | 58.5% |
| 3971395 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.84 | 70.0 | 5.70e-01 | 100.0% | 50.7% |
| 4998511 | 101.1.1.9 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 | 0.83 | 71.0 | 5.32e-01 | 100.0% | 40.0% |
| 4530655 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.83 | 69.0 | 5.17e-01 | 97.5% | 38.0% |
| 5023952 | 101.1.2.888 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4_2 | 0.83 | 74.0 | 6.10e-01 | 100.0% | 71.4% |
| 4439853 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.83 | 70.0 | 5.80e-01 | 97.5% | 54.3% |
| 3279913 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 73.0 | 4.63e-01 | 100.0% | 22.1% |
| 3972713 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.83 | 69.0 | 5.22e-01 | 100.0% | 40.0% |
| 4244028 | 101.1.1.107 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF134 | 0.83 | 68.0 | 6.02e-01 | 97.5% | 63.3% |
| 4241531 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.83 | 67.0 | 5.61e-01 | 95.0% | 52.9% |
| 3289143 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.82 | 67.0 | 5.25e-01 | 95.0% | 43.5% |
| 3860590 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.82 | 68.0 | 6.40e-01 | 97.5% | 76.0% |
| 4175748 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.82 | 68.0 | 5.48e-01 | 97.5% | 47.5% |
| 3284051 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.82 | 69.0 | 5.89e-01 | 97.5% | 58.5% |
| 3283500 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.82 | 68.0 | 6.36e-01 | 100.0% | 76.0% |
| 3305070 | 101.1.1.267 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF26138 | 0.82 | 68.0 | 5.46e-01 | 100.0% | 48.1% |
| 4197050 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.82 | 71.0 | 5.24e-01 | 100.0% | 47.6% |
| 5051680 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.82 | 66.0 | 5.31e-01 | 100.0% | 46.3% |
| 3946049 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 72.0 | 6.69e-01 | 100.0% | 80.0% |
| 4980028 | 101.1.2.879 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF134 | 0.82 | 71.0 | 5.68e-01 | 100.0% | 77.5% |
| 3983411 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.82 | 66.0 | 5.40e-01 | 100.0% | 49.3% |
| 3590541 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.81 | 66.0 | 4.25e-01 | 100.0% | 20.6% |
| 4534822 | 101.1.1.107 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF134 | 0.81 | 66.0 | 5.46e-01 | 97.5% | 50.7% |
| 5064701 | 101.1.2.879 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF134 | 0.81 | 66.0 | 5.32e-01 | 97.5% | 47.5% |
| 4470400 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 66.0 | 5.52e-01 | 100.0% | 52.9% |
| 4979402 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 64.0 | 5.66e-01 | 100.0% | 60.0% |
| 149489 | 101.1.1.95 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PhyR_sigma-like | 0.80 | 66.0 | 5.31e-01 | 97.5% | 47.5% |
| 3954433 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.80 | 66.0 | 6.45e-01 | 100.0% | 84.4% |
| 3569103 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.80 | 65.0 | 4.93e-01 | 97.5% | 38.0% |
| 4934485 | 101.1.1.107 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF134 | 0.80 | 66.0 | 5.44e-01 | 97.5% | 51.4% |
| 3977374 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 70.0 | 6.33e-01 | 100.0% | 90.9% |
| 4334910 | 101.1.1.107 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF134 | 0.80 | 68.0 | 4.81e-01 | 100.0% | 50.4% |
| 3283374 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.79 | 65.0 | 4.97e-01 | 97.5% | 40.0% |
| 3908306 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.79 | 64.0 | 5.70e-01 | 97.5% | 63.3% |
| 3283863 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.79 | 64.0 | 5.00e-01 | 100.0% | 42.2% |
| 4944862 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 67.0 | 5.40e-01 | 100.0% | 77.5% |
| 3961604 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.79 | 63.0 | 4.83e-01 | 100.0% | 38.0% |
| 3953011 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.78 | 65.0 | 5.98e-01 | 100.0% | 70.9% |
| 3284292 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.78 | 63.0 | 4.95e-01 | 100.0% | 42.2% |
| 3573627 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 64.0 | 4.57e-01 | 100.0% | 31.2% |
| 3970884 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.75 | 60.0 | 4.63e-01 | 100.0% | 38.9% |
| 3933366 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.72 | 60.0 | 5.13e-01 | 100.0% | 57.1% |
| 3983783 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.70 | 59.0 | 4.60e-01 | 100.0% | 44.2% |
| 4928203 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.70 | 54.0 | 3.52e-01 | 90.0% | 19.0% |
| None | — | 0.70 | 58.0 | 3.62e-01 | 100.0% | 92.2% | |
| 4495608 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 50.0 | 4.81e-01 | 92.5% | 82.0% |
| 4919061 | 101.1.1.14 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn | 0.62 | 47.0 | 4.62e-01 | 95.0% | 81.8% |
D3
medium
residues 89-136
Domain cluster:
rep: IMGVR_UViG_2639762614_000001-2639762614-2640210178__D87-132
CATH (80)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.90 | 71.0 | 4.90e-01 | 83.3% | 28.2% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 70.0 | 6.28e-01 | 83.3% | 62.5% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 70.0 | 5.28e-01 | 83.3% | 38.1% |
| 1ku3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 70.0 | 6.39e-01 | 83.3% | 72.1% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 69.0 | 6.27e-01 | 87.5% | 63.5% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 69.0 | 5.71e-01 | 83.3% | 50.0% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 66.0 | 6.11e-01 | 85.4% | 65.6% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 65.0 | 5.88e-01 | 85.4% | 61.5% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 69.0 | 6.62e-01 | 87.5% | 88.9% |
| 1etkA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.84 | 66.0 | 5.66e-01 | 85.4% | 54.7% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 63.0 | 5.82e-01 | 83.3% | 65.0% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 67.0 | 6.28e-01 | 87.5% | 79.3% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 69.0 | 6.10e-01 | 89.6% | 71.6% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.82 | 65.0 | 6.18e-01 | 85.4% | 83.9% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.82 | 63.0 | 4.44e-01 | 83.3% | 28.4% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 69.0 | 6.03e-01 | 91.7% | 67.1% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 67.0 | 5.71e-01 | 89.6% | 61.3% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 67.0 | 5.76e-01 | 89.6% | 65.3% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.81 | 61.0 | 6.27e-01 | 85.4% | 86.7% |
| 3cecA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 59.0 | 4.68e-01 | 77.1% | 41.8% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.80 | 60.0 | 4.76e-01 | 83.3% | 40.2% |
| 4ybaA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 59.0 | 4.99e-01 | 79.2% | 50.6% |
| 6f8hC00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 58.0 | 4.60e-01 | 77.1% | 40.9% |
| 2xi8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.79 | 55.0 | 4.91e-01 | 75.0% | 53.0% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.78 | 56.0 | 4.85e-01 | 75.0% | 52.1% |
| 1r69A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.78 | 57.0 | 5.17e-01 | 77.1% | 60.3% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 67.0 | 6.35e-01 | 93.8% | 83.9% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 64.0 | 5.41e-01 | 91.7% | 58.7% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 68.0 | 6.37e-01 | 100.0% | 83.1% |
| 1y9qA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 57.0 | 4.66e-01 | 79.2% | 47.1% |
| 2auwB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.76 | 57.0 | 4.99e-01 | 79.2% | 54.3% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.76 | 66.0 | 5.11e-01 | 100.0% | 90.8% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.76 | 58.0 | 4.66e-01 | 87.5% | 42.6% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.76 | 60.0 | 4.42e-01 | 89.6% | 33.3% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 61.0 | 5.86e-01 | 87.5% | 83.3% |
| 3f51C00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.76 | 56.0 | 4.49e-01 | 79.2% | 44.4% |
| 2pmiB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.75 | 61.0 | 3.94e-01 | 89.6% | 23.0% |
| 5y9sC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 64.0 | 5.35e-01 | 95.8% | 61.0% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 63.0 | 5.20e-01 | 95.8% | 61.4% |
| 2bnmA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 56.0 | 4.78e-01 | 79.2% | 54.1% |
| 2m8gX00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 61.0 | 5.48e-01 | 95.8% | 64.3% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.74 | 57.0 | 3.57e-01 | 85.4% | 16.4% |
| 7vjmB01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 53.0 | 4.86e-01 | 77.1% | 60.9% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 54.0 | 4.47e-01 | 77.1% | 45.1% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 55.0 | 5.26e-01 | 83.3% | 78.9% |
| 1lvaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 59.0 | 5.52e-01 | 95.8% | 91.9% |
| 5fo5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 60.0 | 4.97e-01 | 95.8% | 56.8% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 60.0 | 5.73e-01 | 91.7% | 89.1% |
| 1k6yA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.71 | 53.0 | 5.41e-01 | 95.8% | 87.0% |
| 3lsgA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 58.0 | 5.67e-01 | 95.8% | 94.5% |
| 1sfuA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 61.0 | 5.41e-01 | 97.9% | 81.4% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.71 | 62.0 | 4.53e-01 | 100.0% | 39.7% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 60.0 | 5.01e-01 | 97.9% | 81.2% |
| 5cz2G00 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.70 | 50.0 | 5.22e-01 | 91.7% | 92.7% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.70 | 62.0 | 4.96e-01 | 100.0% | 56.4% |
| 1wi9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 61.0 | 5.79e-01 | 100.0% | 93.1% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 58.0 | 4.98e-01 | 95.8% | 78.8% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 57.0 | 4.77e-01 | 93.8% | 81.4% |
| 2dt5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 62.0 | 5.33e-01 | 100.0% | 72.6% |
| 1qbjC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 59.0 | 5.40e-01 | 100.0% | 86.4% |
| 2jn6A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 58.0 | 4.84e-01 | 97.9% | 55.3% |
| 3f2gA00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.68 | 57.0 | 3.78e-01 | 95.8% | 25.4% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 58.0 | 5.12e-01 | 100.0% | 72.2% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 56.0 | 4.44e-01 | 95.8% | 51.5% |
| 2mqkA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 49.0 | 4.49e-01 | 79.2% | 58.5% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 57.0 | 4.84e-01 | 100.0% | 71.4% |
| 2hyjA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 48.0 | 4.95e-01 | 77.1% | 91.3% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 57.0 | 4.99e-01 | 100.0% | 73.7% |
| 3i71B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 49.0 | 4.67e-01 | 81.2% | 70.7% |
| 2lvsA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 54.0 | 5.41e-01 | 97.9% | 95.9% |
| 5tjjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 57.0 | 5.05e-01 | 100.0% | 72.6% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 54.0 | 5.01e-01 | 97.9% | 90.9% |
| 2o3fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 54.0 | 4.60e-01 | 93.8% | 54.9% |
| 4oazA00 | 1.10.10.1930 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 53.0 | 4.67e-01 | 93.8% | 80.0% |
| 3mvpA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 47.0 | 4.75e-01 | 79.2% | 91.5% |
| 1b9mB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 53.0 | 4.28e-01 | 95.8% | 50.5% |
| 7u32G01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.63 | 47.0 | 4.56e-01 | 100.0% | 73.2% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 46.0 | 4.22e-01 | 81.2% | 77.6% |
| 3tqnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 48.0 | 4.40e-01 | 100.0% | 95.9% |
| 3bhqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 47.0 | 3.15e-01 | 89.6% | 21.8% |
ECOD (92)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4938253 | 101.1.1.9 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 | 0.99 | 79.0 | 8.60e-01 | 83.3% | 100.0% |
| 3603236 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.97 | 74.0 | 8.10e-01 | 85.4% | 95.0% |
| 5030025 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.96 | 81.0 | 8.01e-01 | 93.8% | 86.0% |
| 5058447 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.94 | 82.0 | 7.79e-01 | 91.7% | 80.0% |
| 3288971 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.93 | 74.0 | 4.97e-01 | 83.3% | 26.7% |
| 4388780 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.93 | 74.0 | 5.02e-01 | 83.3% | 27.6% |
| 4202221 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.93 | 73.0 | 6.38e-01 | 83.3% | 58.8% |
| 3284461 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 73.0 | 4.46e-01 | 83.3% | 16.0% |
| 3284984 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.93 | 73.0 | 4.45e-01 | 83.3% | 15.7% |
| 4304581 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.92 | 73.0 | 5.63e-01 | 83.3% | 42.6% |
| 4876274 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.91 | 72.0 | 6.50e-01 | 83.3% | 64.5% |
| 3890615 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.91 | 74.0 | 7.36e-01 | 91.7% | 84.0% |
| 2817645 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.91 | 72.0 | 5.90e-01 | 83.3% | 50.0% |
| 3602714 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.91 | 71.0 | 7.73e-01 | 89.6% | 100.0% |
| 4497189 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.91 | 72.0 | 6.35e-01 | 83.3% | 61.5% |
| 3974736 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 72.0 | 5.76e-01 | 83.3% | 47.1% |
| 4160122 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.90 | 71.0 | 4.84e-01 | 83.3% | 26.7% |
| 4577850 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.90 | 71.0 | 5.42e-01 | 83.3% | 40.4% |
| 3961841 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.90 | 71.0 | 6.14e-01 | 83.3% | 57.1% |
| 4663875 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.90 | 71.0 | 4.35e-01 | 83.3% | 16.7% |
| 4032673 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 70.0 | 4.32e-01 | 83.3% | 16.3% |
| 4486973 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.90 | 70.0 | 5.65e-01 | 83.3% | 47.1% |
| 4946254 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 71.0 | 7.32e-01 | 93.8% | 91.1% |
| 4372550 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.89 | 70.0 | 5.54e-01 | 83.3% | 44.4% |
| 3969641 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.89 | 70.0 | 5.77e-01 | 83.3% | 50.0% |
| 4279016 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.89 | 69.0 | 5.74e-01 | 83.3% | 50.0% |
| 3951829 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.88 | 69.0 | 5.59e-01 | 83.3% | 47.1% |
| 3972638 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.88 | 69.0 | 6.17e-01 | 83.3% | 61.5% |
| 2448404 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.88 | 69.0 | 6.34e-01 | 83.3% | 66.7% |
| 4963466 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.88 | 76.0 | 7.85e-01 | 97.9% | 100.0% |
| 4997411 | 101.1.3.33 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 | 0.88 | 68.0 | 5.66e-01 | 83.3% | 50.0% |
| 3587538 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.88 | 68.0 | 6.00e-01 | 83.3% | 58.8% |
| 4146353 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.88 | 68.0 | 5.64e-01 | 83.3% | 50.0% |
| 5028064 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 68.0 | 4.84e-01 | 83.3% | 30.8% |
| 4243530 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.87 | 68.0 | 6.09e-01 | 85.4% | 61.5% |
| 5027601 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 80.0 | 7.39e-01 | 100.0% | 81.7% |
| 3971149 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.87 | 68.0 | 5.65e-01 | 83.3% | 50.0% |
| 3281471 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.87 | 68.0 | 5.62e-01 | 87.5% | 50.0% |
| 3589532 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 68.0 | 5.25e-01 | 83.3% | 40.8% |
| 3972713 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.87 | 68.0 | 5.28e-01 | 85.4% | 42.1% |
| 4175748 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.87 | 67.0 | 5.60e-01 | 83.3% | 50.0% |
| 2330636 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.87 | 67.0 | 6.52e-01 | 83.3% | 75.5% |
| 5027602 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 80.0 | 7.61e-01 | 100.0% | 87.3% |
| 3284469 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.86 | 67.0 | 5.71e-01 | 83.3% | 53.3% |
| 4947436 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 67.0 | 6.40e-01 | 83.3% | 72.7% |
| 3282225 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.86 | 67.0 | 5.57e-01 | 83.3% | 50.0% |
| 4165188 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.86 | 67.0 | 5.44e-01 | 83.3% | 47.1% |
| 3587755 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.85 | 70.0 | 4.95e-01 | 87.5% | 46.9% |
| 3971395 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.85 | 66.0 | 5.61e-01 | 87.5% | 53.3% |
| 4244028 | 101.1.1.107 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF134 | 0.85 | 65.0 | 6.07e-01 | 83.3% | 66.7% |
| 5067053 | 101.1.2.879 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF134 | 0.85 | 65.0 | 5.73e-01 | 83.3% | 58.6% |
| 3969325 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.85 | 65.0 | 5.72e-01 | 87.5% | 57.1% |
| 3946049 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 69.0 | 6.84e-01 | 87.5% | 92.0% |
| 5027604 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 74.0 | 6.90e-01 | 100.0% | 78.3% |
| 4439853 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.84 | 64.0 | 5.65e-01 | 83.3% | 57.1% |
| 4205790 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.84 | 64.0 | 5.38e-01 | 85.4% | 50.0% |
| 4534822 | 101.1.1.107 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF134 | 0.84 | 64.0 | 5.50e-01 | 83.3% | 53.3% |
| 4270967 | 101.1.1.107 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF134 | 0.84 | 64.0 | 4.84e-01 | 83.3% | 36.4% |
| 3284051 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.83 | 64.0 | 5.79e-01 | 83.3% | 61.5% |
| 4965520 | 101.1.1.556 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7317 | 0.83 | 70.0 | 6.67e-01 | 97.9% | 80.0% |
| 4952159 | 101.1.1.9 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 | 0.83 | 66.0 | 5.24e-01 | 85.4% | 46.7% |
| 3283374 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.83 | 63.0 | 5.02e-01 | 85.4% | 42.1% |
| 4972037 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 71.0 | 7.02e-01 | 93.8% | 100.0% |
| 5014197 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 63.0 | 5.01e-01 | 83.3% | 42.1% |
| 3959929 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.82 | 63.0 | 5.30e-01 | 85.4% | 50.0% |
| 3795916 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 63.0 | 6.48e-01 | 83.3% | 88.9% |
| 4934485 | 101.1.1.107 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF134 | 0.82 | 63.0 | 5.44e-01 | 85.4% | 54.1% |
| 4934128 | 101.1.1.9 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 | 0.82 | 64.0 | 4.58e-01 | 83.3% | 33.8% |
| 4520564 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.82 | 72.0 | 6.00e-01 | 95.8% | 61.3% |
| 149489 | 101.1.1.95 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PhyR_sigma-like | 0.82 | 63.0 | 5.28e-01 | 83.3% | 50.0% |
| 4944862 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 66.0 | 5.49e-01 | 87.5% | 80.0% |
| 4449179 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 71.0 | 6.57e-01 | 100.0% | 76.7% |
| 4610234 | 101.1.2.89 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR | 0.82 | 70.0 | 6.53e-01 | 100.0% | 76.7% |
| 4318089 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.82 | 70.0 | 6.53e-01 | 100.0% | 76.7% |
| 5052578 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.82 | 62.0 | 6.66e-01 | 87.5% | 100.0% |
| 3908306 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.81 | 68.0 | 6.35e-01 | 93.8% | 85.0% |
| 4998511 | 101.1.1.9 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 | 0.81 | 64.0 | 5.06e-01 | 85.4% | 44.2% |
| 3959876 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.81 | 62.0 | 4.83e-01 | 85.4% | 40.0% |
| 3279596 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.81 | 64.0 | 4.23e-01 | 87.5% | 60.0% |
| 3573627 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 61.0 | 4.50e-01 | 83.3% | 33.6% |
| 5045749 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.80 | 66.0 | 5.98e-01 | 97.9% | 67.7% |
| 3860590 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.80 | 69.0 | 6.87e-01 | 95.8% | 96.0% |
| None | — | 0.80 | 58.0 | 3.63e-01 | 89.6% | 14.9% | |
| 4454772 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.79 | 61.0 | 5.55e-01 | 87.5% | 63.1% |
| 3929142 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 69.0 | 6.35e-01 | 100.0% | 76.7% |
| 1769338 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 67.0 | 6.00e-01 | 100.0% | 71.4% |
| 5025805 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 62.0 | 5.97e-01 | 97.9% | 76.4% |
| 5014241 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.77 | 68.0 | 5.56e-01 | 97.9% | 55.3% |
| 3931341 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 64.0 | 5.25e-01 | 95.8% | 51.1% |
| 5062514 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.76 | 63.0 | 6.51e-01 | 93.8% | 100.0% |
| 3964284 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 65.0 | 6.10e-01 | 100.0% | 83.3% |
| 3964709 | 101.1.1.118 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_IS630 | 0.72 | 57.0 | 5.68e-01 | 100.0% | 88.0% |
D4
medium
residues 146-191
Domain cluster:
rep: IMGVR_UViG_2639762614_000001-2639762614-2640210178__D87-132
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04545.23 best | Sigma70_r4 | 24.5 | 2.10e-05 | 73.9% | 52.0% |