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IMGVR_UViG_3300000885_000002-3300000885-JGI12445J12830_100040430

Arc-Vir

IMGVR_UViG_3300000885_000002-3300000885-JGI12445J12830_100040430

Quality

65.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-101
PDB
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 50.0 4.76e-01 81.2% 91.3%
3dasA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.65 59.0 3.86e-01 100.0% 93.4%
3qijB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 49.0 4.75e-01 81.2% 87.6%
1v5uA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 49.0 4.30e-01 81.2% 82.9%
2dg1C00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 56.0 3.73e-01 98.8% 83.7%
2vseA04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.63 43.0 3.52e-01 70.0% 96.5%
2dhoA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.63 45.0 3.32e-01 76.2% 80.0%
3fvzA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 54.0 3.54e-01 93.8% 68.4%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 46.0 4.36e-01 81.2% 90.0%
1tqzA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 48.0 4.16e-01 83.7% 94.3%
1wgqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 46.0 4.22e-01 81.2% 82.6%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 46.0 4.01e-01 80.0% 71.0%
5eoxB03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 46.0 4.00e-01 81.2% 97.7%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 46.0 4.21e-01 81.2% 85.2%
1pjxA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 53.0 3.60e-01 98.8% 88.5%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 46.0 4.27e-01 81.2% 84.5%
1e2tA02 3.30.1120.150 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.60 42.0 4.11e-01 80.0% 67.4%
4z7aA03 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.60 43.0 3.67e-01 75.0% 95.4%
2cofA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 45.0 4.13e-01 81.2% 81.3%
1zatA02 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.59 41.0 3.52e-01 71.2% 100.0%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 48.0 3.71e-01 90.0% 66.8%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 43.0 3.93e-01 77.5% 81.5%
4azzA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.59 46.0 3.66e-01 85.0% 59.4%
2mtzA02 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.59 44.0 3.87e-01 80.0% 95.0%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 45.0 3.44e-01 85.0% 56.9%
6yleA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 51.0 3.28e-01 98.8% 81.9%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.57 44.0 4.28e-01 85.0% 97.8%
1rwiA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 49.0 3.51e-01 98.8% 91.8%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.55 42.0 3.64e-01 88.7% 51.6%
8ornD01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 45.0 3.65e-01 96.2% 85.2%
4lpqA02 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.55 44.0 3.74e-01 86.3% 98.4%
6g62A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 35.0 3.12e-01 87.5% 44.3%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 49.0 3.29e-01 100.0% 83.7%
3eagA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.54 44.0 3.23e-01 91.3% 89.2%
1y9lA00 2.40.128.230 Mainly Beta › Beta Barrel › Lipocalin › Pilot protein MxiM 0.53 45.0 4.07e-01 95.0% 100.0%
3bexA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 39.0 3.60e-01 81.2% 100.0%
7ccbA01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.53 43.0 3.55e-01 90.0% 76.6%
2vseA03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 42.0 3.54e-01 90.0% 95.7%
2vseA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 41.0 3.52e-01 90.0% 100.0%
5mw8A01 3.30.200.110 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Inositol-pentakisphosphate 2-kinase, N-lobe 0.52 38.0 3.37e-01 77.5% 100.0%
4dqaA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.35e-01 98.8% 68.2%
4h7wA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.51 35.0 2.66e-01 70.0% 97.9%
2eo6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 42.0 3.81e-01 90.0% 99.1%
4emtA02 3.40.50.12100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein 0.51 41.0 3.52e-01 90.0% 95.5%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3924468 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.69 45.0 2.95e-01 71.2% 16.3%
3214213 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 52.0 4.81e-01 81.2% 92.0%
None 0.65 50.0 4.21e-01 81.2% 63.1%
3909375 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.64 49.0 4.13e-01 81.2% 60.7%
3943609 5.1.3.23 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.64 58.0 3.92e-01 100.0% 90.3%
3979051 5.1.3.23 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.64 58.0 3.91e-01 100.0% 91.9%
4974887 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 50.0 4.22e-01 85.0% 83.7%
3427234 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.64 43.0 3.08e-01 86.3% 22.9%
None 0.63 48.0 4.08e-01 81.2% 63.1%
3217951 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 48.0 3.93e-01 82.5% 68.0%
None 0.63 48.0 4.38e-01 81.2% 78.1%
3720832 5.1.3.23 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.63 55.0 3.70e-01 98.8% 81.9%
4634067 2484.1.1.60 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_E_G 0.62 46.0 3.84e-01 77.5% 60.0%
3697213 5.1.3.11 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MRJP 0.62 51.0 3.29e-01 88.7% 49.6%
3989835 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 46.0 4.03e-01 80.0% 95.0%
3424294 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 43.0 4.23e-01 75.0% 94.4%
5032559 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 43.0 4.16e-01 73.8% 98.9%
3175415 211.1.1.55 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › PF29700 0.61 34.0 3.88e-01 70.0% 73.3%
4976249 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 48.0 4.30e-01 86.3% 100.0%
5082200 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 47.0 4.24e-01 85.0% 95.7%
5068496 5.1.4.471 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NHL 0.61 53.0 3.14e-01 96.2% 39.5%
3222053 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.60 50.0 3.66e-01 92.5% 76.4%
3616213 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 53.0 3.62e-01 96.2% 75.3%
3792816 220.1.1.33 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 0.60 45.0 4.03e-01 82.5% 73.3%
4172684 2484.1.1.37 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.60 43.0 3.72e-01 76.2% 87.5%
4336160 319.1.1.21 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › GvpH 0.60 39.0 3.98e-01 72.5% 67.5%
4103748 2484.1.1.60 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_E_G 0.59 45.0 4.20e-01 81.2% 81.0%
4934826 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 53.0 3.58e-01 100.0% 90.2%
3235681 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.59 53.0 3.33e-01 100.0% 79.0%
3298595 10.1.1.11 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.59 45.0 3.64e-01 82.5% 82.6%
3166679 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 53.0 3.40e-01 100.0% 98.1%
3930104 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 52.0 3.64e-01 100.0% 85.6%
7390 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.58 41.0 2.87e-01 80.0% 21.5%
3625066 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 49.0 3.40e-01 92.5% 69.1%
3717674 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.58 41.0 3.94e-01 83.7% 65.6%
3844416 5.1.4.229 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N 0.58 43.0 2.73e-01 78.8% 39.5%
3706087 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 39.0 4.26e-01 92.5% 93.3%
4043193 2484.1.1.37 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.58 46.0 4.20e-01 90.0% 97.3%
3260311 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.57 46.0 2.78e-01 87.5% 22.2%
5000262 5.1.11.43 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_CGLA 0.57 48.0 3.06e-01 92.5% 85.3%
185415 3459.1.1.1 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 0.57 44.0 4.28e-01 85.0% 97.8%
1447892 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.57 45.0 3.91e-01 87.5% 88.4%
3236787 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.57 46.0 3.93e-01 88.7% 74.6%
3961651 4091.1.1.1 beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › YkuD 0.56 40.0 3.68e-01 72.5% 86.0%
3231483 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.56 51.0 3.85e-01 100.0% 48.6%
3945385 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.54 40.0 3.15e-01 78.8% 75.0%
3945055 2484.2.1.1 mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain › Methyltransf_1N 0.53 35.0 3.46e-01 82.5% 62.4%
3391728 3459.1.1.1 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 0.53 41.0 4.06e-01 86.3% 86.9%
3177452 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 44.0 2.61e-01 93.8% 27.9%
4073461 2484.1.1.12 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.52 44.0 3.47e-01 98.8% 89.5%
4961481 4325.1.1.0 mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.52 37.0 3.88e-01 75.0% 85.7%
5032518 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 38.0 3.63e-01 78.8% 96.8%
3512674 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.51 41.0 3.54e-01 91.3% 83.7%
2881070 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.50 37.0 3.53e-01 81.2% 94.2%
4543035 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.50 42.0 2.80e-01 100.0% 90.1%
3599562 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.50 37.0 3.66e-01 91.3% 72.9%