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IMGVR_UViG_3300000928_002594-3300000928-OpTDRAFT_100169601

Arc-Vir

IMGVR_UViG_3300000928_002594-3300000928-OpTDRAFT_100169601

Quality

84.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 32-106
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3t69A01 3.30.420.300 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, substrate binding domain 0.55 35.0 3.52e-01 84.0% 64.0%
2gupA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 32.0 2.96e-01 78.7% 45.4%
3dtdD00 2.60.40.1880 Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein 0.52 40.0 3.27e-01 84.0% 75.9%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 32.0 3.37e-01 82.7% 69.7%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.50 36.0 3.31e-01 77.3% 86.3%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4938866 11.1.1.18 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LTD 0.85 75.0 5.93e-01 100.0% 50.0%
4946830 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.79 64.0 4.95e-01 100.0% 41.2%
5070688 11.1.1.18 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LTD 0.78 69.0 5.28e-01 100.0% 43.6%
5063986 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.77 59.0 4.97e-01 100.0% 49.6%
4067273 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.54 39.0 3.11e-01 78.7% 93.3%
3260179 2484.1.1.104 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_1 0.54 38.0 3.48e-01 74.7% 95.0%
D2 high residues 117-290
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13091.13 best PLDc_2 62.8 4.10e-17 81.0% 94.7%
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1byrA00 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.94 80.0 8.65e-01 97.7% 100.0%
5bpdA02 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.83 66.0 7.34e-01 96.6% 99.3%
3hsiA02 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.83 78.0 7.30e-01 97.7% 85.5%
2f5tX01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.82 62.0 6.88e-01 96.6% 97.1%
7e0mA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.81 64.0 6.99e-01 81.0% 98.6%
1xdpA04 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.81 69.0 6.75e-01 96.0% 82.2%
1f0iA02 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.81 78.0 6.42e-01 100.0% 87.9%
4ggjA00 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.81 74.0 7.65e-01 96.0% 99.4%
4urjD00 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.79 74.0 7.42e-01 99.4% 96.6%
4gelB00 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.79 74.0 7.07e-01 97.1% 97.5%
3hsiA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.79 74.0 6.59e-01 99.4% 79.2%
7wu1A01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.78 74.0 6.95e-01 98.3% 99.0%
1f0iA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.77 70.0 6.51e-01 95.4% 89.7%
4rctA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.73 67.0 6.62e-01 97.7% 91.4%
1q32C02 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.68 61.0 5.51e-01 97.1% 95.8%
4d8tA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 37.0 4.59e-01 83.9% 89.0%
5c3uA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.64 36.0 4.71e-01 72.4% 100.0%
1vb5B02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.63 45.0 4.50e-01 73.0% 90.6%
3a11B02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.63 45.0 4.32e-01 72.4% 87.3%
3ecsD02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.63 45.0 4.33e-01 72.4% 85.2%
1wkvA03 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 37.0 4.75e-01 73.0% 100.0%
4zeoH02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.63 45.0 4.69e-01 72.4% 91.9%
2zsjA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 35.0 4.59e-01 72.4% 99.0%
4k7zA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 38.0 4.44e-01 93.7% 87.2%
6qkgA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 35.0 4.26e-01 93.1% 85.6%
1ebdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 37.0 4.32e-01 93.7% 83.5%
5u25A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 37.0 4.29e-01 94.8% 82.8%
1y7lA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 36.0 4.61e-01 72.4% 100.0%
5ybwA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 35.0 4.46e-01 71.8% 99.0%
8ajjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 36.0 4.32e-01 93.7% 89.5%
6cmzA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 36.0 4.23e-01 90.2% 85.7%
2r9zA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 36.0 4.28e-01 93.7% 88.1%
5x1yA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 37.0 4.27e-01 96.6% 86.1%
6i4pA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 37.0 4.27e-01 92.5% 84.9%
3k30A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 38.0 4.24e-01 93.1% 82.7%
3wnvA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 35.0 3.51e-01 96.6% 55.1%
3o0hB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 36.0 4.23e-01 93.7% 88.0%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 36.0 4.21e-01 96.6% 85.4%
4eqsA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 36.0 3.92e-01 93.1% 74.8%
7en7A01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.57 36.0 3.60e-01 92.0% 58.1%
3e48A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 42.0 4.18e-01 98.3% 73.8%
2xciC01 3.40.50.11720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain 0.56 32.0 3.35e-01 97.1% 58.8%
1k92A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 39.0 4.06e-01 83.9% 76.9%
2yxlA04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 42.0 3.98e-01 77.0% 99.5%
8c0zE01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 37.0 4.15e-01 93.7% 87.8%
6qp2A01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.56 39.0 3.59e-01 99.4% 53.4%
4ivnA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.56 35.0 3.42e-01 93.1% 56.9%
3m4xA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 47.0 3.97e-01 91.4% 96.3%
3cr8C02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 36.0 3.44e-01 73.0% 58.1%
1jhdA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 38.0 3.64e-01 72.4% 66.0%
5mn7A01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.53 42.0 4.38e-01 96.6% 86.7%
2v3aA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 38.0 4.18e-01 79.9% 92.6%
2b0cA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 35.0 3.93e-01 73.0% 87.2%
3lm3A01 3.20.20.510 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Uncharacterised protein PF12979, DUF3863 0.52 43.0 3.65e-01 89.7% 95.8%
4d9gA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 34.0 4.00e-01 74.1% 96.6%
1t35E00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 41.0 4.03e-01 82.8% 94.5%
3g68B01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.51 32.0 3.09e-01 91.4% 51.9%
2b4yA01 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.51 38.0 4.04e-01 77.6% 90.1%
4f2gA02 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.51 36.0 3.99e-01 74.1% 95.8%
1o94A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 37.0 3.91e-01 93.1% 84.9%
3mt0A00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 41.0 3.51e-01 86.8% 56.6%
2xkbL00 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.50 46.0 3.58e-01 100.0% 84.2%
4ov4A01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.50 40.0 3.45e-01 84.5% 87.4%
2j62A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.50 39.0 3.24e-01 82.2% 82.3%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042575 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.97 87.0 8.43e-01 97.7% 84.2%
5063988 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.96 60.0 7.70e-01 80.5% 100.0%
4946827 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.96 89.0 8.56e-01 100.0% 86.3%
4970261 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.96 86.0 8.55e-01 97.7% 88.9%
4938867 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.96 87.0 8.31e-01 100.0% 83.1%
5081517 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.95 93.0 8.24e-01 100.0% 82.6%
4935109 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.95 86.0 8.78e-01 100.0% 95.3%
5083464 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.94 84.0 8.35e-01 97.7% 88.3%
4964067 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.94 85.0 8.28e-01 100.0% 86.5%
4954932 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.94 78.0 8.30e-01 95.4% 95.5%
5068857 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.94 92.0 6.79e-01 100.0% 46.4%
3946929 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.94 80.0 8.56e-01 96.0% 98.7%
5044983 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.93 84.0 8.09e-01 98.3% 84.2%
4952157 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.93 89.0 8.67e-01 100.0% 91.9%
5063987 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.93 72.0 7.83e-01 98.9% 92.0%
4991826 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.93 78.0 8.14e-01 96.0% 92.0%
5059924 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.93 90.0 8.63e-01 100.0% 89.2%
4096200 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.93 78.0 8.48e-01 97.1% 100.0%
5041385 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.93 78.0 8.05e-01 90.8% 90.9%
4980610 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.92 90.0 8.28e-01 100.0% 92.9%
4948408 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.90 83.0 6.50e-01 96.0% 50.8%
4976590 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.90 87.0 8.42e-01 100.0% 91.1%
5025440 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.90 74.0 7.89e-01 91.4% 94.8%
3839190 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.88 79.0 8.17e-01 97.7% 97.6%
5045026 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.88 60.0 7.18e-01 78.2% 100.0%
4939955 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.87 64.0 7.43e-01 83.3% 100.0%
5079442 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.87 75.0 7.83e-01 97.7% 96.9%
4992548 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.87 64.0 7.34e-01 97.1% 100.0%
5021825 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.87 73.0 7.87e-01 91.4% 100.0%
5001195 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.87 81.0 7.86e-01 97.1% 89.5%
3689097 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.86 77.0 6.89e-01 91.4% 93.3%
3382359 300.1.1.16 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc, PLDc_2 0.86 83.0 6.32e-01 100.0% 87.0%
3600062 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.86 78.0 7.74e-01 93.7% 97.2%
3780531 300.1.1.1 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc 0.86 81.0 7.44e-01 98.3% 87.0%
4952147 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.86 78.0 6.91e-01 98.3% 69.8%
5029268 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.86 67.0 7.43e-01 96.0% 97.9%
3743360 300.1.1.1 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc 0.85 81.0 7.05e-01 99.4% 84.0%
3282234 300.1.1.16 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc, PLDc_2 0.85 80.0 7.26e-01 97.1% 96.8%
3281162 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.85 78.0 7.92e-01 98.9% 96.5%
5010831 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.85 67.0 7.16e-01 98.3% 91.6%
5076496 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.85 64.0 7.28e-01 93.7% 100.0%
5065195 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.85 63.0 7.00e-01 90.8% 94.9%
3667974 300.1.1.1 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc 0.85 81.0 7.05e-01 99.4% 94.3%
3209841 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.85 80.0 7.18e-01 98.3% 95.2%
3473553 300.1.1.1 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc 0.85 80.0 7.24e-01 98.3% 86.5%
4961939 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.85 64.0 7.20e-01 94.8% 99.3%
3496243 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.84 81.0 6.19e-01 100.0% 91.5%
3987535 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.84 78.0 7.42e-01 95.4% 87.2%
3249665 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.84 81.0 7.77e-01 100.0% 90.2%
5026283 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.84 63.0 7.19e-01 96.6% 99.3%
1684837 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.84 67.0 7.17e-01 97.1% 93.4%
3689911 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.84 81.0 6.68e-01 100.0% 71.4%
3963740 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.84 80.0 6.99e-01 99.4% 75.9%
4012695 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.84 81.0 5.59e-01 100.0% 45.9%
4943752 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.84 77.0 7.67e-01 96.0% 92.2%
5045038 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.84 64.0 7.04e-01 97.1% 94.4%
3263235 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.84 78.0 7.47e-01 96.6% 93.3%
5024616 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.84 62.0 6.96e-01 97.7% 95.0%
3637572 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.83 80.0 5.71e-01 99.4% 92.7%
4014156 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.83 80.0 6.98e-01 100.0% 81.5%
4643350 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.83 80.0 7.05e-01 100.0% 78.8%
4414404 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.83 78.0 7.12e-01 98.3% 78.1%
3968736 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.83 80.0 7.81e-01 99.4% 100.0%
3407967 300.1.1.11 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_3 0.83 77.0 6.99e-01 96.0% 87.3%
5025497 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.83 66.0 7.16e-01 97.7% 97.9%
4059033 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.83 76.0 7.25e-01 94.3% 88.2%
4337356 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.83 77.0 5.60e-01 96.6% 47.5%
4124074 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.83 76.0 7.19e-01 95.4% 84.5%
3967507 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.82 79.0 6.82e-01 99.4% 75.6%
4092009 300.1.1.7 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PP_kinase_C 0.82 71.0 6.78e-01 94.8% 79.0%
4511668 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.82 77.0 7.42e-01 98.3% 88.2%
4954266 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.82 67.0 7.31e-01 94.8% 100.0%
3190832 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.82 79.0 6.86e-01 100.0% 83.3%
5036368 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.82 71.0 7.47e-01 94.3% 98.8%
4040753 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.81 76.0 7.70e-01 96.6% 98.8%
4078947 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.81 77.0 6.82e-01 98.3% 72.8%
3587922 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.81 76.0 7.09e-01 98.9% 81.4%
4198029 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.81 77.0 7.33e-01 98.3% 89.7%
4012634 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.80 76.0 7.34e-01 97.7% 89.9%
4963457 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.80 64.0 6.74e-01 97.7% 91.6%
3271099 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.80 77.0 6.89e-01 100.0% 90.4%
1227839 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.80 76.0 6.52e-01 100.0% 81.1%
150292 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.80 62.0 6.79e-01 98.3% 96.5%
4962059 300.1.1.18 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle 0.79 67.0 6.90e-01 99.4% 92.6%
4009305 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.79 71.0 7.36e-01 95.4% 99.4%
1227837 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.79 74.0 7.07e-01 97.1% 97.5%
4964818 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.79 62.0 6.71e-01 98.3% 94.7%
4945833 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.77 69.0 7.18e-01 93.1% 100.0%
3893665 300.1.1.11 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_3 0.77 71.0 6.73e-01 96.6% 83.5%
4999177 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.76 66.0 6.85e-01 97.7% 96.3%
4949314 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.76 61.0 6.54e-01 93.7% 96.0%
4963506 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.75 58.0 6.36e-01 92.5% 96.6%
4926984 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.75 63.0 6.62e-01 99.4% 95.6%
4277215 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.75 63.0 6.49e-01 95.4% 92.1%
4950352 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.72 63.0 6.56e-01 97.7% 98.1%
5002470 300.1.1.26 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › DUF7436 0.72 66.0 6.51e-01 98.3% 91.1%
3395848 300.1.1.3 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Tyr-DNA_phospho 0.68 59.0 5.53e-01 92.0% 84.8%
5020196 2484.1.1.334 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1786 0.54 39.0 3.03e-01 73.0% 94.2%
5029301 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.53 41.0 3.98e-01 94.3% 72.3%
D3 high residues 313-475
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13091.13 best PLDc_2 68.3 8.10e-19 87.7% 96.2%
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1byrA00 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.91 79.0 8.22e-01 98.2% 95.4%
7e0mA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.84 71.0 7.44e-01 87.1% 98.6%
7wu1A01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.83 79.0 7.30e-01 100.0% 97.0%
1f0iA02 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.83 79.0 6.39e-01 100.0% 82.6%
3hsiA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.82 78.0 6.73e-01 100.0% 75.8%
3hsiA02 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.82 77.0 6.99e-01 98.2% 80.7%
5bpdA02 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.81 66.0 7.04e-01 97.5% 95.1%
4urjD00 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.81 76.0 7.39e-01 99.4% 91.4%
1xdpA04 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.81 69.0 6.53e-01 96.3% 77.3%
1xdpA03 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.79 72.0 6.86e-01 98.2% 83.5%
4ggjA00 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.79 75.0 7.49e-01 98.2% 97.0%
7clgA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.78 74.0 6.94e-01 98.8% 88.9%
1f0iA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.78 71.0 6.42e-01 95.7% 81.8%
4gelB00 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.78 74.0 6.84e-01 98.8% 94.9%
2c1lA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.76 70.0 6.62e-01 96.9% 86.2%
1jy1A01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.70 64.0 5.93e-01 98.2% 85.2%
3sq3A01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.66 60.0 5.80e-01 97.5% 90.1%
3cgbA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 40.0 4.22e-01 97.5% 73.2%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 46.0 4.24e-01 84.7% 97.2%
6eqoA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 46.0 4.29e-01 87.1% 94.6%
3mt0A00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 45.0 3.77e-01 93.3% 56.6%
8db3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 38.0 3.57e-01 80.4% 86.5%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042576 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.96 84.0 8.84e-01 96.9% 97.3%
4946828 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.96 82.0 8.60e-01 99.4% 95.3%
4976591 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.95 88.0 8.67e-01 100.0% 90.6%
5077482 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.95 87.0 8.42e-01 100.0% 86.9%
4964068 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.95 88.0 8.78e-01 100.0% 93.9%
5059925 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.94 91.0 8.67e-01 100.0% 90.8%
4987976 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.94 92.0 8.38e-01 100.0% 86.5%
4948408 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.94 86.0 6.57e-01 100.0% 47.4%
5068857 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.93 91.0 6.61e-01 100.0% 44.8%
5044984 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.93 83.0 8.43e-01 98.8% 93.1%
4968677 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.93 90.0 8.76e-01 100.0% 96.0%
4970262 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.93 86.0 8.40e-01 100.0% 89.1%
5001196 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.93 84.0 8.08e-01 100.0% 84.4%
4935110 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.92 89.0 8.57e-01 100.0% 90.0%
5056736 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.91 81.0 8.35e-01 99.4% 96.1%
4954932 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.91 78.0 8.10e-01 99.4% 93.5%
4980611 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.91 88.0 8.67e-01 100.0% 95.9%
5058870 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.90 79.0 8.13e-01 96.9% 94.8%
3946929 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.90 78.0 8.04e-01 96.3% 94.2%
5014761 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.90 80.0 8.19e-01 98.8% 96.1%
4096200 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.90 79.0 8.29e-01 100.0% 98.7%
5016045 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.89 79.0 7.91e-01 100.0% 90.9%
4940371 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.89 74.0 7.63e-01 97.5% 90.8%
5083464 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.89 81.0 7.75e-01 97.5% 84.4%
5041762 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.89 78.0 7.85e-01 100.0% 90.3%
4991826 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.88 77.0 7.78e-01 100.0% 90.2%
4932583 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.88 82.0 8.34e-01 98.2% 98.7%
4983383 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.88 77.0 8.09e-01 95.7% 99.3%
5058871 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.88 80.0 7.96e-01 98.2% 92.7%
4948223 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.87 70.0 7.51e-01 95.1% 95.7%
3801690 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.87 84.0 7.73e-01 100.0% 94.5%
5041386 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.87 80.0 8.08e-01 98.2% 96.9%
4028274 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.87 82.0 7.73e-01 100.0% 84.2%
4187061 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.86 78.0 6.87e-01 99.4% 68.0%
3185141 300.1.1.1 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc 0.86 82.0 7.20e-01 100.0% 78.9%
3348982 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.86 81.0 6.77e-01 97.5% 73.7%
4352005 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.86 78.0 7.22e-01 98.8% 77.9%
3249675 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.86 78.0 7.37e-01 98.8% 80.5%
3652365 300.1.1.11 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_3 0.86 81.0 5.57e-01 98.2% 40.8%
4358783 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.86 79.0 6.82e-01 99.4% 66.0%
4371205 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.86 76.0 6.71e-01 97.5% 66.7%
3839190 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.86 79.0 7.95e-01 99.4% 94.5%
4491670 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.86 78.0 7.11e-01 99.4% 75.0%
3345295 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.86 82.0 6.59e-01 100.0% 73.0%
3345296 300.1.1.11 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_3 0.86 81.0 7.45e-01 98.2% 94.5%
3226093 300.1.1.11 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_3 0.86 80.0 7.41e-01 97.5% 89.5%
3263234 300.1.1.17 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2, PLDc_3 0.86 83.0 7.34e-01 100.0% 89.9%
3593269 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.85 78.0 6.97e-01 98.8% 71.6%
3243397 300.1.1.11 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_3 0.85 82.0 7.48e-01 100.0% 91.2%
3766483 300.1.1.11 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_3 0.85 79.0 6.98e-01 95.7% 77.3%
5021825 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.85 75.0 7.89e-01 95.7% 99.3%
3263235 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.85 82.0 7.63e-01 100.0% 90.3%
5043339 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.85 70.0 7.60e-01 95.1% 100.0%
3211723 300.1.1.11 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_3 0.85 81.0 7.15e-01 100.0% 84.4%
3482770 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.85 81.0 6.74e-01 100.0% 83.1%
3209841 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.85 80.0 6.99e-01 98.8% 91.7%
3407967 300.1.1.11 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_3 0.85 81.0 7.18e-01 100.0% 84.1%
3594526 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.84 80.0 6.78e-01 100.0% 71.9%
3716266 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.84 80.0 6.76e-01 100.0% 75.3%
5045026 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.84 61.0 7.07e-01 84.0% 100.0%
3263583 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.84 79.0 7.28e-01 96.9% 85.5%
3689911 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.84 81.0 6.54e-01 100.0% 67.1%
4012695 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.84 81.0 5.50e-01 100.0% 44.8%
3689097 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.84 79.0 6.92e-01 97.5% 93.3%
5075820 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.84 77.0 7.56e-01 97.5% 90.6%
3473553 300.1.1.1 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc 0.84 80.0 7.07e-01 100.0% 78.0%
4014156 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.83 80.0 6.82e-01 100.0% 77.4%
5040292 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.83 70.0 7.17e-01 98.8% 91.0%
3839291 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.83 80.0 6.74e-01 100.0% 69.6%
4979096 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.83 71.0 7.00e-01 98.2% 84.7%
3165673 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.83 78.0 6.89e-01 98.8% 78.2%
5040938 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.83 70.0 6.91e-01 99.4% 84.1%
4514190 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.83 79.0 6.83e-01 100.0% 75.3%
5072450 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.82 74.0 7.54e-01 96.3% 96.2%
4966181 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.82 77.0 7.41e-01 98.8% 94.0%
3967506 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.82 77.0 6.57e-01 97.5% 74.2%
5038709 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.82 68.0 6.89e-01 98.2% 87.5%
3190832 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.82 78.0 6.66e-01 100.0% 80.0%
5079442 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.82 72.0 7.35e-01 99.4% 94.4%
4337356 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.81 79.0 5.60e-01 100.0% 80.0%
5075218 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.81 68.0 6.95e-01 96.9% 90.3%
4423909 300.1.1.4 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FAM83 0.81 77.0 7.12e-01 98.8% 82.0%
4026683 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.81 77.0 6.58e-01 99.4% 82.0%
3255206 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.81 75.0 6.59e-01 97.5% 93.5%
4059033 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.81 77.0 7.12e-01 98.2% 84.1%
3844392 300.1.1.4 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FAM83 0.81 76.0 7.25e-01 98.8% 86.5%
4040753 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.81 78.0 7.59e-01 99.4% 97.1%
4129187 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.81 77.0 5.67e-01 100.0% 43.2%
5074001 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.81 66.0 7.00e-01 96.9% 95.2%
3864409 300.1.1.4 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FAM83 0.81 76.0 7.46e-01 98.8% 93.1%
3983052 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.80 77.0 6.49e-01 100.0% 72.0%
4973721 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.80 68.0 6.91e-01 98.8% 89.4%
3282234 300.1.1.16 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc, PLDc_2 0.80 74.0 6.61e-01 96.9% 94.1%
3971585 300.1.1.16 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc, PLDc_2 0.80 74.0 6.62e-01 97.5% 96.7%
4988012 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.79 75.0 6.90e-01 98.8% 81.0%
4977809 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.78 73.0 6.88e-01 98.8% 83.7%
4932126 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.78 67.0 7.05e-01 97.5% 99.3%
4956048 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.78 70.0 6.91e-01 98.2% 90.6%
4959005 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.77 65.0 6.82e-01 98.8% 96.6%
4969542 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.75 64.0 6.70e-01 96.9% 96.7%
D4 high residues 513-603
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3okgA01 3.90.220.20 Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains 0.53 36.0 2.82e-01 70.3% 48.5%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5045202 5096.1.1.0 few secondary structure elements › Ca-binding domain in anthrax protective antigen › Ca-binding domain in anthrax protective antigen › Ca-binding domain in anthrax protective antigen 0.93 58.0 6.42e-01 79.1% 77.3%
4944243 5096.1.1.0 few secondary structure elements › Ca-binding domain in anthrax protective antigen › Ca-binding domain in anthrax protective antigen › Ca-binding domain in anthrax protective antigen 0.87 47.0 5.01e-01 81.3% 61.3%
4944004 5096.1.1.0 few secondary structure elements › Ca-binding domain in anthrax protective antigen › Ca-binding domain in anthrax protective antigen › Ca-binding domain in anthrax protective antigen 0.87 61.0 5.40e-01 87.9% 52.8%
4946391 5096.1.1.0 few secondary structure elements › Ca-binding domain in anthrax protective antigen › Ca-binding domain in anthrax protective antigen › Ca-binding domain in anthrax protective antigen 0.86 61.0 5.63e-01 87.9% 60.0%
5047475 5096.1.1.0 few secondary structure elements › Ca-binding domain in anthrax protective antigen › Ca-binding domain in anthrax protective antigen › Ca-binding domain in anthrax protective antigen 0.75 59.0 6.37e-01 82.4% 95.0%
4944592 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.69 48.0 3.21e-01 87.9% 19.7%
4944593 5096.1.1.0 few secondary structure elements › Ca-binding domain in anthrax protective antigen › Ca-binding domain in anthrax protective antigen › Ca-binding domain in anthrax protective antigen 0.68 48.0 5.28e-01 87.9% 94.3%
5040159 5096.1.1.0 few secondary structure elements › Ca-binding domain in anthrax protective antigen › Ca-binding domain in anthrax protective antigen › Ca-binding domain in anthrax protective antigen 0.68 54.0 5.67e-01 82.4% 94.0%
5068544 131.1.1.3 alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.55 40.0 3.25e-01 78.0% 95.6%