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IMGVR_UViG_3300001073_000010-3300001073-C687J13245_10003110

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300001073_000010-3300001073-C687J13245_10003110 ↗
Kingdom:: archaea

Quality

89.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-49

PDB

Domain cluster: representative

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7eqiA02	3.40.47.10	Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase	0.57	41.0	2.99e-01	82.6%	30.7%
2cxiA02	3.50.40.10	Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3	0.57	47.0	3.19e-01	100.0%	58.1%
4jqfA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.55	40.0	3.45e-01	95.7%	47.9%
1rsgA01	3.50.50.60	Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain	0.55	47.0	3.00e-01	100.0%	41.2%
1zarA03	1.10.510.10	Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1	0.55	47.0	3.72e-01	97.8%	64.9%
3fmwC03	3.40.30.120	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin ›	0.55	46.0	3.53e-01	100.0%	70.2%
6ui4A01	1.20.120.720	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain	0.54	43.0	3.56e-01	93.5%	58.0%
1o7dB00	1.20.1270.50	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain	0.52	36.0	3.01e-01	78.3%	44.0%
7wu7501	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.50	43.0	3.20e-01	100.0%	56.3%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3619690	3619.1.1.7 ↗	alpha arrays › Nucleoporin NUP120 helical domain › Nucleoporin NUP120 helical domain › Nucleoporin NUP120 helical domain › NPP-6_helical	0.73	55.0	3.51e-01	82.6%	32.0%
3970054	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.68	43.0	4.26e-01	89.1%	60.0%
3743438	5081.1.1.1 ↗	alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid	0.63	47.0	3.14e-01	80.4%	26.7%
3234037	4.1.1.25 ↗	beta barrels › SH3 › SH3 › SH3 › PAZ	0.61	49.0	3.66e-01	89.1%	78.3%
4964723	108.4.1.4 ↗	alpha arrays › EF-hand › Hypothetical protein MTH865 › Hypothetical protein MTH865 › DUF5785	0.61	46.0	4.17e-01	82.6%	57.1%
5032031	108.4.1.0 ↗	alpha arrays › EF-hand › Hypothetical protein MTH865 › Hypothetical protein MTH865	0.60	44.0	4.10e-01	84.8%	60.0%
3594687	5081.1.1.0 ↗	alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like	0.60	46.0	3.15e-01	93.5%	32.5%
5043906	108.4.1.0 ↗	alpha arrays › EF-hand › Hypothetical protein MTH865 › Hypothetical protein MTH865	0.59	44.0	4.05e-01	84.8%	60.0%
4138987	3265.1.1.1 ↗	alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st	0.58	45.0	4.13e-01	89.1%	67.7%
3360162	5081.1.1.2 ↗	alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DER1	0.56	50.0	3.23e-01	100.0%	45.7%
3609846	301.1.1.0 ↗	a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like	0.53	42.0	3.28e-01	95.7%	63.5%
3947798	304.8.1.70 ↗	a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Phage_GPA	0.53	43.0	2.69e-01	97.8%	15.4%
3289682	148.1.3.23 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_6	0.52	45.0	3.45e-01	100.0%	52.7%