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IMGVR_UViG_3300001309_000021-3300001309-JGI20129J14369_100001313
Arc-VirIMGVR_UViG_3300001309_000021-3300001309-JGI20129J14369_100001313
Identity
- Kingdom:
- archaea
Quality
71.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 48-139
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3t8vA05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.69 | 61.0 | 4.16e-01 | 100.0% | 45.4% |
| 1b8dA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.67 | 49.0 | 4.03e-01 | 76.1% | 56.1% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.65 | 52.0 | 4.36e-01 | 87.0% | 96.3% |
| 3mpxA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.65 | 54.0 | 4.20e-01 | 91.3% | 89.8% |
| 2qyuA02 | 1.25.40.300 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein | 0.65 | 57.0 | 4.54e-01 | 100.0% | 90.3% |
| 1hu3A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 59.0 | 4.51e-01 | 100.0% | 67.6% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 46.0 | 4.26e-01 | 76.1% | 85.0% |
| 2wzkA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.64 | 49.0 | 4.63e-01 | 81.5% | 84.5% |
| 2lt3A01 | 1.20.58.1290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain | 0.62 | 41.0 | 4.03e-01 | 90.2% | 62.0% |
| 2wcoA01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.62 | 54.0 | 3.61e-01 | 97.8% | 56.1% |
| 4egwA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.61 | 45.0 | 4.16e-01 | 78.3% | 84.0% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 52.0 | 4.13e-01 | 94.6% | 69.4% |
| 2b8iA00 | 1.20.1280.100 | Mainly Alpha › Up-down Bundle › Monooxygenase › Pas factor, saposin domain | 0.60 | 36.0 | 3.88e-01 | 71.7% | 70.1% |
| 1ki1B01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.60 | 48.0 | 3.77e-01 | 87.0% | 89.9% |
| 4yonA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.60 | 41.0 | 3.20e-01 | 71.7% | 50.9% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 47.0 | 4.02e-01 | 84.8% | 58.4% |
| 2rgnB01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.59 | 42.0 | 3.29e-01 | 75.0% | 49.5% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 44.0 | 4.35e-01 | 79.3% | 82.5% |
| 4gouA03 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.59 | 46.0 | 3.70e-01 | 88.0% | 96.4% |
| 7qihA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 42.0 | 4.07e-01 | 76.1% | 99.0% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 42.0 | 3.89e-01 | 78.3% | 81.1% |
| 3ihvA03 | 1.25.40.900 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 44.0 | 3.88e-01 | 83.7% | 77.0% |
| 3ggyA00 | 1.20.1260.60 | Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 | 0.57 | 41.0 | 3.24e-01 | 75.0% | 39.2% |
| 3mvpA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 43.0 | 3.81e-01 | 84.8% | 69.1% |
| 3frrA00 | 1.20.1260.60 | Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 | 0.56 | 41.0 | 3.25e-01 | 75.0% | 37.6% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 43.0 | 4.35e-01 | 82.6% | 96.7% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 41.0 | 3.98e-01 | 77.2% | 86.3% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 41.0 | 3.93e-01 | 78.3% | 85.5% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.55 | 38.0 | 4.10e-01 | 84.8% | 89.2% |
| 3iu6A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.55 | 45.0 | 3.90e-01 | 89.1% | 81.8% |
| 3pe0A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 41.0 | 3.95e-01 | 79.3% | 86.8% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 41.0 | 3.99e-01 | 79.3% | 97.1% |
| 5uiyA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.55 | 37.0 | 3.61e-01 | 70.7% | 85.0% |
| 1s2xA00 | 1.20.190.30 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › CAG pathogenicity island protein, CagZ | 0.54 | 44.0 | 3.63e-01 | 92.4% | 76.1% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.54 | 41.0 | 4.16e-01 | 82.6% | 86.0% |
| 4abnA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 44.0 | 3.25e-01 | 95.7% | 36.2% |
| 2qsbA00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.53 | 37.0 | 3.83e-01 | 78.3% | 80.0% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.53 | 38.0 | 3.33e-01 | 77.2% | 59.2% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.53 | 39.0 | 3.85e-01 | 80.4% | 79.4% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.53 | 44.0 | 4.29e-01 | 91.3% | 92.0% |
| 2lxlA00 | 1.25.40.270 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 | 0.52 | 42.0 | 3.55e-01 | 90.2% | 79.8% |
| 3cskA02 | 3.30.540.30 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › | 0.51 | 39.0 | 3.28e-01 | 81.5% | 85.2% |
| 1y4cA03 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.51 | 38.0 | 3.62e-01 | 81.5% | 65.5% |
| 4u04B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 44.0 | 4.47e-01 | 100.0% | 100.0% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.51 | 38.0 | 3.57e-01 | 81.5% | 71.8% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3167019 | 1075.4.1.8 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Glucan_synthase | 0.68 | 55.0 | 3.94e-01 | 87.0% | 57.0% |
| 3210941 | 109.4.1.371 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RTP1_C1 | 0.68 | 60.0 | 3.88e-01 | 96.7% | 48.8% |
| 3551630 | 109.4.1.1328 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26034 | 0.68 | 51.0 | 4.88e-01 | 90.2% | 68.2% |
| 185553 | 109.4.1.80 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RRN3 | 0.67 | 59.0 | 4.58e-01 | 100.0% | 70.0% |
| 3272245 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.65 | 53.0 | 3.80e-01 | 88.0% | 65.6% |
| 3473142 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 45.0 | 3.90e-01 | 71.7% | 75.7% |
| 3560229 | 3291.1.1.230 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › TBCA_PH | 0.64 | 45.0 | 3.88e-01 | 71.7% | 98.6% |
| 4034377 | 4982.1.1.2 ↗ | alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain › RsbU_N | 0.63 | 47.0 | 4.79e-01 | 82.6% | 81.1% |
| 3357085 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.63 | 45.0 | 4.65e-01 | 73.9% | 91.8% |
| 4936900 | 2498.1.1.6 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 | 0.63 | 52.0 | 3.18e-01 | 90.2% | 47.4% |
| 3973819 | 191.1.1.21 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_18 | 0.62 | 47.0 | 4.13e-01 | 82.6% | 75.9% |
| 3580347 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.62 | 44.0 | 4.30e-01 | 75.0% | 90.5% |
| 3631582 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.61 | 42.0 | 4.14e-01 | 70.7% | 89.0% |
| 3312027 | 603.1.1.156 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PGG | 0.61 | 46.0 | 4.17e-01 | 81.5% | 69.2% |
| 3163923 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.61 | 43.0 | 3.58e-01 | 73.9% | 60.1% |
| 4029302 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.61 | 47.0 | 3.69e-01 | 81.5% | 82.6% |
| 3633174 | 604.1.1.55 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › RasGAP_C | 0.60 | 44.0 | 4.36e-01 | 77.2% | 83.0% |
| 3245731 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.60 | 44.0 | 4.71e-01 | 79.3% | 90.0% |
| 4029359 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.60 | 44.0 | 3.95e-01 | 77.2% | 81.4% |
| 3573559 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.60 | 44.0 | 4.03e-01 | 77.2% | 81.7% |
| 3396401 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.59 | 44.0 | 4.05e-01 | 77.2% | 83.5% |
| 4187493 | 603.1.1.103 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 | 0.59 | 49.0 | 4.19e-01 | 89.1% | 69.0% |
| 3977220 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.59 | 48.0 | 3.49e-01 | 88.0% | 61.5% |
| 3598135 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.59 | 41.0 | 4.22e-01 | 71.7% | 85.9% |
| 3171689 | 603.1.1.105 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 | 0.59 | 44.0 | 4.09e-01 | 80.4% | 85.0% |
| 4026926 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.57 | 41.0 | 3.64e-01 | 76.1% | 97.8% |
| 3807085 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.57 | 41.0 | 4.25e-01 | 77.2% | 90.6% |
| 4060037 | 109.4.1.264 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RMD1-3 | 0.56 | 48.0 | 3.47e-01 | 95.7% | 49.1% |
| 3559622 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.56 | 41.0 | 3.54e-01 | 78.3% | 81.9% |
| 3855165 | 604.6.1.65 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT, GGA_N-GAT | 0.56 | 44.0 | 3.94e-01 | 83.7% | 65.4% |
| 3581262 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 42.0 | 4.26e-01 | 80.4% | 94.4% |
| 3919832 | 109.4.1.1651 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_EMC2 | 0.56 | 39.0 | 3.39e-01 | 90.2% | 43.9% |
| 4979111 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.56 | 41.0 | 4.08e-01 | 79.3% | 89.0% |
| 3461370 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.56 | 41.0 | 4.21e-01 | 78.3% | 90.6% |
| 3711224 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.56 | 43.0 | 4.12e-01 | 81.5% | 78.1% |
| 3756535 | 604.1.1.5 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_3 | 0.56 | 41.0 | 3.89e-01 | 79.3% | 78.3% |
| 3370265 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.56 | 40.0 | 3.67e-01 | 77.2% | 60.8% |
| 3832 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.55 | 41.0 | 3.99e-01 | 79.3% | 97.1% |
| 3243045 | 109.4.1.1312 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30475 | 0.54 | 44.0 | 3.75e-01 | 93.5% | 53.5% |
| 3289629 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.54 | 40.0 | 3.78e-01 | 78.3% | 78.2% |
| 3597397 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.54 | 44.0 | 3.49e-01 | 93.5% | 91.4% |
| 1181406 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 44.0 | 3.26e-01 | 94.6% | 37.1% |
| 1268315 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.53 | 40.0 | 3.70e-01 | 82.6% | 77.2% |
| 3611163 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.52 | 46.0 | 2.98e-01 | 98.9% | 84.5% |
| None | — | 0.52 | 46.0 | 3.29e-01 | 100.0% | 36.8% |