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IMGVR_UViG_3300001309_000021-3300001309-JGI20129J14369_100001330
Arc-VirIMGVR_UViG_3300001309_000021-3300001309-JGI20129J14369_100001330
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-108
Domain cluster:
rep: NC_028883.1__YP_009206170.1__PHIMMP01_20051__00052__D2-102
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u9pA00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.87 | 66.0 | 6.90e-01 | 100.0% | 84.4% |
| 2efvA00 | 3.30.70.3260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF10802, DUF2540 | 0.73 | 53.0 | 5.78e-01 | 98.1% | 95.1% |
| 4lrvF00 | 1.10.1220.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › DNA sulphur modification protein DndE | 0.72 | 66.0 | 6.64e-01 | 99.0% | 100.0% |
| 4hv0C00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.70 | 57.0 | 6.07e-01 | 96.1% | 98.9% |
| 2rh3A00 | 1.10.1220.190 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › VirC2, RHH domain | 0.67 | 60.0 | 5.74e-01 | 99.0% | 95.0% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 31.0 | 3.33e-01 | 90.3% | 58.0% |
| 6n8eA02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.57 | 51.0 | 3.74e-01 | 96.1% | 79.6% |
| 3eeeA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.57 | 39.0 | 3.29e-01 | 71.8% | 59.6% |
| 3lcvB01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.57 | 31.0 | 3.78e-01 | 98.1% | 93.0% |
| 2lrmA00 | 1.10.890.30 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein | 0.56 | 33.0 | 3.65e-01 | 100.0% | 71.4% |
| 2jgpA03 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.55 | 49.0 | 3.72e-01 | 96.1% | 81.1% |
| 5du9B02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.55 | 49.0 | 3.79e-01 | 96.1% | 92.6% |
| 1l5aA03 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.55 | 49.0 | 3.88e-01 | 96.1% | 81.1% |
| 5hc8A00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.54 | 46.0 | 3.53e-01 | 92.2% | 88.6% |
| 3fhgA01 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.54 | 37.0 | 3.87e-01 | 91.3% | 77.7% |
| 1r8eA02 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.53 | 27.0 | 3.11e-01 | 93.2% | 65.8% |
| 2vsqA02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.53 | 48.0 | 3.63e-01 | 98.1% | 73.6% |
| 3gg4A02 | 1.20.58.2240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 41.0 | 3.47e-01 | 83.5% | 89.8% |
| 1q9jB02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.52 | 46.0 | 3.77e-01 | 96.1% | 87.1% |
| 4znmA01 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.52 | 46.0 | 3.44e-01 | 96.1% | 79.7% |
| 3zhiA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 34.0 | 3.89e-01 | 92.2% | 94.5% |
| 5t3eB02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.51 | 44.0 | 3.36e-01 | 96.1% | 82.7% |
| 7emyA03 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.51 | 44.0 | 3.28e-01 | 96.1% | 77.5% |
| 3l60A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.50 | 43.0 | 3.44e-01 | 97.1% | 89.1% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4373529 | 101.1.11.43 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TraY | 0.89 | 79.0 | 8.07e-01 | 100.0% | 97.0% |
| 4932867 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.85 | 43.0 | 4.50e-01 | 85.4% | 54.7% |
| 5011682 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.82 | 54.0 | 6.59e-01 | 97.1% | 100.0% |
| 4983836 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.80 | 75.0 | 7.28e-01 | 100.0% | 91.2% |
| 5016958 | 101.1.11.17 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF2540 | 0.73 | 54.0 | 5.93e-01 | 99.0% | 98.8% |
| 2869 | 101.1.11.8 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › VirC2 | 0.67 | 60.0 | 5.74e-01 | 99.0% | 95.0% |
| 154009 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.67 | 59.0 | 6.04e-01 | 96.1% | 98.0% |
| 2516843 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.57 | 51.0 | 3.71e-01 | 96.1% | 77.2% |
| 4974770 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.56 | 42.0 | 3.66e-01 | 78.6% | 75.6% |
| 2488394 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.56 | 50.0 | 3.73e-01 | 97.1% | 84.0% |
| 3974570 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.56 | 50.0 | 3.75e-01 | 97.1% | 78.8% |
| 3283987 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.56 | 50.0 | 3.60e-01 | 96.1% | 77.9% |
| 2492379 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.56 | 50.0 | 3.70e-01 | 96.1% | 82.8% |
| 3287336 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.55 | 49.0 | 3.64e-01 | 96.1% | 82.4% |
| 3955767 | 323.1.1.37 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding, Condensation | 0.55 | 49.0 | 2.78e-01 | 97.1% | 17.8% |
| 1063734 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.55 | 49.0 | 3.67e-01 | 96.1% | 83.1% |
| 3641558 | 109.4.1.1188 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ORMDL | 0.55 | 40.0 | 3.72e-01 | 77.7% | 85.2% |
| 5035425 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.55 | 42.0 | 4.25e-01 | 80.6% | 100.0% |
| 4379551 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.54 | 48.0 | 3.55e-01 | 97.1% | 74.8% |
| 3278105 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.54 | 48.0 | 3.53e-01 | 96.1% | 77.0% |
| 3279373 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.54 | 48.0 | 3.50e-01 | 96.1% | 81.1% |
| 3278104 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.54 | 48.0 | 3.59e-01 | 96.1% | 82.4% |
| 3955392 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.54 | 47.0 | 3.47e-01 | 96.1% | 74.9% |
| 4121769 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.54 | 48.0 | 3.58e-01 | 97.1% | 82.4% |
| 3284240 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.54 | 47.0 | 3.56e-01 | 96.1% | 83.2% |
| 3279111 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.54 | 47.0 | 3.49e-01 | 97.1% | 74.8% |
| 3955387 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.54 | 48.0 | 3.50e-01 | 97.1% | 74.4% |
| 3203931 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.54 | 47.0 | 3.45e-01 | 96.1% | 81.1% |
| 4450486 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.53 | 48.0 | 3.53e-01 | 98.1% | 76.2% |
| 4142114 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.53 | 47.0 | 3.48e-01 | 97.1% | 77.7% |
| 3464581 | 323.1.1.11 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › PapA_C | 0.53 | 47.0 | 3.39e-01 | 97.1% | 75.9% |
| 3278101 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.53 | 46.0 | 3.62e-01 | 97.1% | 83.6% |
| 2554272 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.53 | 46.0 | 3.51e-01 | 97.1% | 78.9% |
| 3372524 | 109.27.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › NPH3 | 0.53 | 40.0 | 2.83e-01 | 79.6% | 32.1% |
| 3188760 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.53 | 46.0 | 3.29e-01 | 97.1% | 78.1% |
| 4949916 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.53 | 46.0 | 3.39e-01 | 95.1% | 83.7% |
| 3278420 | 323.1.1.11 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › PapA_C | 0.53 | 46.0 | 3.38e-01 | 96.1% | 78.2% |
| 5048897 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.53 | 46.0 | 3.30e-01 | 95.1% | 82.0% |
| 4033950 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.52 | 46.0 | 3.45e-01 | 96.1% | 84.0% |
| 4301084 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.52 | 46.0 | 3.48e-01 | 97.1% | 81.2% |
| 3783109 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.52 | 45.0 | 3.39e-01 | 96.1% | 83.5% |
| 4990796 | 604.39.1.9 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 | 0.52 | 39.0 | 3.24e-01 | 81.6% | 76.4% |
| 4019581 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.52 | 45.0 | 3.28e-01 | 97.1% | 83.8% |
| 4224592 | 323.1.1.11 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › PapA_C | 0.51 | 45.0 | 3.38e-01 | 96.1% | 80.8% |
| 4422828 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.51 | 45.0 | 3.34e-01 | 96.1% | 77.4% |
| 3743449 | 323.1.1.14 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AATase | 0.51 | 44.0 | 3.32e-01 | 96.1% | 84.5% |
| 3821499 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.51 | 44.0 | 3.41e-01 | 98.1% | 91.0% |
| 4458484 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.51 | 38.0 | 3.45e-01 | 77.7% | 71.1% |
| 3786179 | 323.1.1.14 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AATase | 0.51 | 44.0 | 3.23e-01 | 96.1% | 83.9% |
| 4200601 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.50 | 44.0 | 3.11e-01 | 97.1% | 61.2% |
| 4289790 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.50 | 44.0 | 3.11e-01 | 96.1% | 80.6% |
| 3288786 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.50 | 44.0 | 3.30e-01 | 98.1% | 78.5% |
D2
high
residues 136-212