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IMGVR_UViG_3300001309_000021-3300001309-JGI20129J14369_100001334

Arc-Vir

IMGVR_UViG_3300001309_000021-3300001309-JGI20129J14369_100001334

Quality

84.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 71-166
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 41.0 3.92e-01 72.9% 51.8%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 40.0 4.43e-01 75.0% 75.0%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 35.0 3.78e-01 75.0% 63.0%
3blzA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 44.0 4.07e-01 74.0% 82.3%
3ecfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 45.0 4.12e-01 88.5% 57.8%
3fljA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 43.0 3.83e-01 88.5% 51.1%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 41.0 3.75e-01 75.0% 53.7%
4lgqA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 43.0 3.89e-01 75.0% 86.5%
3ec9A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 43.0 3.95e-01 81.2% 56.6%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.60 37.0 4.30e-01 85.4% 93.7%
3dm8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 44.0 3.91e-01 77.1% 86.7%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 42.0 3.95e-01 74.0% 83.3%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 40.0 4.11e-01 79.2% 72.5%
1di2A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 41.0 4.67e-01 78.1% 100.0%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 42.0 4.00e-01 74.0% 89.1%
2jq5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 40.0 3.70e-01 71.9% 70.3%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.58 48.0 4.48e-01 91.7% 83.7%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 41.0 3.76e-01 74.0% 86.6%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 37.0 3.91e-01 74.0% 73.8%
5aigA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 42.0 3.92e-01 78.1% 90.3%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 39.0 4.29e-01 78.1% 87.2%
4hy1A02 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.57 43.0 3.70e-01 80.2% 88.0%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 39.0 4.44e-01 78.1% 97.2%
2r4iA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 40.0 3.73e-01 74.0% 85.4%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 38.0 4.39e-01 77.1% 98.5%
3kkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 43.0 3.80e-01 81.2% 81.9%
3ehcB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 41.0 3.71e-01 75.0% 60.2%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 40.0 4.04e-01 78.1% 74.5%
1uhzA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 43.0 4.48e-01 83.3% 89.9%
6p3lA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 40.0 3.80e-01 75.0% 87.0%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 39.0 3.60e-01 74.0% 85.2%
3c1aA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.55 42.0 3.72e-01 82.3% 55.9%
3f40A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 40.0 3.88e-01 77.1% 85.6%
4h3uA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 43.0 3.91e-01 84.4% 62.3%
3mpxA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 32.0 3.24e-01 74.0% 56.7%
3ebtA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 3.76e-01 81.2% 85.5%
1zc0A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 48.0 3.40e-01 95.8% 38.1%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 31.0 3.52e-01 74.0% 74.6%
1h2iA01 3.30.390.80 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 0.54 43.0 3.78e-01 86.5% 67.6%
1x49A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 38.0 4.22e-01 77.1% 100.0%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.54 47.0 3.38e-01 95.8% 39.4%
4qxaB00 2.30.29.230 Mainly Beta › Roll › PH-domain like › 0.53 37.0 3.23e-01 74.0% 46.9%
2shpB03 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 45.0 3.29e-01 95.8% 43.5%
1z5bB03 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.52 39.0 3.46e-01 80.2% 91.3%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 39.0 3.98e-01 84.4% 79.4%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 38.0 3.39e-01 76.0% 75.7%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.52 45.0 3.93e-01 96.9% 69.1%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 30.0 2.95e-01 75.0% 50.5%
4r78A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 40.0 4.06e-01 94.8% 85.4%
1x7dB01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.51 45.0 3.81e-01 100.0% 61.5%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.51 34.0 2.85e-01 86.5% 36.1%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 42.0 3.76e-01 94.8% 70.9%
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 36.0 3.48e-01 74.0% 84.4%
3bk5A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.50 44.0 3.37e-01 99.0% 78.7%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
6395 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.67 41.0 3.76e-01 74.0% 46.5%
3251181 883.1.1.18 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26545 0.67 60.0 4.96e-01 100.0% 81.2%
2617497 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.66 47.0 4.42e-01 74.0% 86.1%
5052916 243.1.1.22 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Lumazine_bd_2 0.62 45.0 4.05e-01 75.0% 79.2%
3503376 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.61 42.0 4.36e-01 78.1% 76.7%
5009499 331.3.1.7 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG 0.61 54.0 4.82e-01 99.0% 75.6%
3736685 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.60 53.0 4.43e-01 99.0% 78.2%
358014 243.1.1.22 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Lumazine_bd_2 0.60 42.0 3.95e-01 74.0% 83.3%
5071336 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.59 42.0 3.83e-01 74.0% 76.6%
3257413 7579.1.1.61 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PhoPQ_related 0.59 50.0 3.46e-01 95.8% 45.1%
4600973 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 40.0 4.57e-01 77.1% 97.1%
5019886 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.59 36.0 4.02e-01 75.0% 78.7%
3617638 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.59 43.0 4.22e-01 83.3% 70.5%
1146735 243.1.1.29 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4783 0.59 42.0 4.00e-01 74.0% 89.1%
4394424 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 40.0 4.04e-01 77.1% 69.0%
3255190 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 42.0 4.15e-01 75.0% 87.1%
4254174 4099.1.1.22 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-P 0.58 49.0 4.31e-01 93.8% 61.4%
3283292 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.58 47.0 4.29e-01 88.5% 90.8%
4419937 77.1.1.0 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.58 37.0 3.93e-01 90.6% 72.9%
3408941 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 40.0 4.32e-01 77.1% 86.3%
3408974 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 40.0 4.10e-01 78.1% 73.7%
4959452 7579.1.1.27 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › AXE1 0.57 50.0 3.55e-01 99.0% 41.1%
3409973 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 40.0 4.44e-01 81.2% 94.7%
3505248 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 48.0 4.76e-01 93.8% 99.0%
3661582 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.56 41.0 4.32e-01 78.1% 87.1%
3439826 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.56 45.0 3.96e-01 99.0% 57.3%
5809 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.56 43.0 4.48e-01 83.3% 89.9%
4928985 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.55 40.0 3.55e-01 77.1% 86.0%
3372915 330.1.1.5 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.55 40.0 4.28e-01 78.1% 89.4%
3882607 11.1.1.860 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CLSTN_C 0.55 44.0 2.75e-01 88.5% 19.7%
3783070 5.1.4.119 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C 0.55 38.0 2.63e-01 74.0% 24.9%
3240153 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.54 41.0 3.83e-01 85.4% 63.2%
3538274 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 44.0 3.26e-01 88.5% 44.0%
3702319 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.53 37.0 3.92e-01 74.0% 83.5%
3344044 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 42.0 4.33e-01 87.5% 96.7%
3275712 220.1.1.12 beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 0.52 34.0 2.75e-01 75.0% 32.0%
5050012 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.52 40.0 4.18e-01 81.2% 98.8%
4024970 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.52 37.0 2.47e-01 74.0% 22.8%
3592054 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.52 40.0 3.03e-01 82.3% 76.1%
3213551 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.52 40.0 3.74e-01 85.4% 64.8%
3418904 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.51 40.0 4.00e-01 85.4% 100.0%
3516145 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.51 35.0 3.77e-01 77.1% 86.3%
3782222 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 34.0 2.89e-01 100.0% 42.6%
D2 medium residues 1-62_167-186
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.70 36.0 4.43e-01 74.4% 83.3%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 37.0 4.04e-01 90.2% 68.2%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 40.0 4.46e-01 100.0% 79.4%
3f6gA01 3.30.160.740 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 44.0 5.05e-01 96.3% 98.3%
2ia7A00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 35.0 3.17e-01 75.6% 38.7%
1sr9A02 3.30.160.270 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain 0.63 53.0 4.33e-01 96.3% 69.5%
4ge1C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 57.0 4.29e-01 100.0% 68.9%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 44.0 3.51e-01 74.4% 58.2%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 36.0 3.96e-01 100.0% 71.2%
4xmeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 56.0 4.28e-01 100.0% 70.1%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.60 53.0 4.39e-01 96.3% 71.4%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 37.0 4.08e-01 100.0% 80.6%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.60 52.0 4.18e-01 96.3% 84.1%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.60 42.0 2.85e-01 73.2% 54.5%
2acaA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.58 44.0 3.47e-01 81.7% 81.0%
2i1yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.58 40.0 2.80e-01 72.0% 53.0%
4aw8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 42.0 3.25e-01 78.0% 76.3%
6jhpA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.57 48.0 3.29e-01 93.9% 96.0%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 34.0 3.78e-01 100.0% 79.4%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 33.0 3.45e-01 100.0% 63.9%
2bzlA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.56 40.0 2.79e-01 75.6% 59.9%
4bumX00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.55 50.0 3.40e-01 98.8% 89.4%
3nqhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 45.0 3.17e-01 93.9% 64.0%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 44.0 3.03e-01 90.2% 52.9%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 46.0 3.16e-01 100.0% 82.4%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.54 46.0 3.91e-01 96.3% 76.5%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.53 39.0 3.96e-01 80.5% 91.7%
4hfsA00 2.60.120.1270 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.44e-01 97.6% 77.8%
4nzrM02 2.160.20.180 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.52 45.0 3.49e-01 97.6% 90.8%
3mi6A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.51 42.0 2.97e-01 96.3% 56.6%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.51 33.0 3.16e-01 92.7% 55.1%
1gpqB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.51 45.0 3.87e-01 98.8% 64.1%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 44.0 3.56e-01 100.0% 72.9%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.50 41.0 2.96e-01 96.3% 91.5%
4o8sA01 3.10.450.620 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain 0.50 34.0 3.01e-01 70.7% 47.2%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.50 43.0 3.54e-01 96.3% 97.4%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3221229 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 36.0 4.63e-01 75.6% 91.1%
5053256 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.68 48.0 4.12e-01 72.0% 97.6%
4037383 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.66 39.0 4.24e-01 100.0% 72.3%
4646632 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 39.0 4.27e-01 100.0% 73.8%
3942438 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.65 55.0 5.05e-01 95.1% 100.0%
4158157 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 38.0 4.14e-01 100.0% 72.3%
3948020 283.2.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.64 33.0 3.05e-01 74.4% 36.4%
3781402 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.63 54.0 4.83e-01 96.3% 94.2%
3472467 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.63 47.0 4.88e-01 98.8% 85.3%
4213539 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.63 36.0 3.99e-01 100.0% 70.8%
4051625 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.63 38.0 4.11e-01 98.8% 73.8%
3306779 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.63 37.0 4.06e-01 100.0% 72.3%
4041586 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.63 37.0 4.04e-01 100.0% 72.3%
3916012 192.29.1.276 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › FmiP_Thoc5 0.63 50.0 3.83e-01 85.4% 82.7%
5035253 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.63 53.0 3.67e-01 92.7% 96.0%
4446791 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 37.0 4.03e-01 100.0% 72.3%
4038269 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 37.0 4.07e-01 100.0% 73.8%
3608236 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 38.0 4.16e-01 100.0% 76.9%
4268775 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.62 52.0 4.61e-01 95.1% 88.0%
142633 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 36.0 3.96e-01 100.0% 71.2%
3212945 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.62 36.0 4.14e-01 100.0% 79.7%
3950208 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 36.0 3.98e-01 98.8% 72.3%
3265170 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 36.0 3.99e-01 100.0% 72.3%
3590827 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.61 36.0 3.96e-01 100.0% 72.3%
4201878 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.61 38.0 4.17e-01 100.0% 78.5%
4146937 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.61 36.0 3.96e-01 98.8% 72.3%
4292289 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.61 36.0 3.93e-01 98.8% 72.3%
3932878 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.61 42.0 2.86e-01 70.7% 27.1%
4135259 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.61 35.0 3.91e-01 100.0% 72.3%
3684759 331.3.1.10 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AtaL 0.60 43.0 3.40e-01 75.6% 54.1%
4609098 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.60 51.0 4.44e-01 97.6% 85.2%
4269457 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.60 51.0 4.42e-01 97.6% 85.1%
4028885 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 36.0 3.96e-01 100.0% 73.8%
4419948 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 35.0 3.80e-01 100.0% 70.8%
4950072 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.60 52.0 4.53e-01 96.3% 71.2%
3599172 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 37.0 4.08e-01 100.0% 78.5%
4086925 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 34.0 3.77e-01 98.8% 69.2%
4954798 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.59 50.0 4.43e-01 96.3% 89.4%
3171541 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.59 49.0 4.34e-01 97.6% 94.6%
5034160 225.1.1.40 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › DUF763 0.59 45.0 3.14e-01 93.9% 26.9%
4139532 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.58 50.0 4.28e-01 96.3% 70.4%
4393122 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.58 49.0 4.35e-01 97.6% 92.8%
4104219 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.58 36.0 3.94e-01 100.0% 78.5%
4160858 241.1.1.2 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C 0.57 48.0 4.08e-01 97.6% 98.7%
363009 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.57 49.0 3.29e-01 96.3% 48.5%
3797449 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 49.0 3.03e-01 95.1% 87.8%
4984691 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.57 47.0 4.26e-01 95.1% 100.0%
4393617 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.57 48.0 4.21e-01 97.6% 95.4%
4524363 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.57 34.0 3.72e-01 98.8% 73.8%
5004264 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.57 48.0 4.29e-01 97.6% 91.1%
4391625 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.56 47.0 4.34e-01 96.3% 100.0%
3269422 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.55 39.0 2.72e-01 97.6% 22.2%
4345080 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.55 34.0 3.76e-01 100.0% 78.5%
3376518 331.3.1.43 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C 0.55 40.0 2.91e-01 78.0% 62.4%
3194649 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.54 44.0 2.66e-01 90.2% 45.1%
2442052 5.1.3.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin 0.53 42.0 3.64e-01 91.5% 90.9%
3575058 5.1.5.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › ELYS-bb 0.52 43.0 3.00e-01 90.2% 38.9%
None 0.52 44.0 2.86e-01 96.3% 36.6%
4978599 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 45.0 3.02e-01 100.0% 85.5%
3592763 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.52 44.0 3.38e-01 93.9% 75.3%
3306595 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.52 44.0 3.49e-01 95.1% 77.7%
4647210 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.52 44.0 2.80e-01 97.6% 86.3%
3278559 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.51 40.0 3.23e-01 98.8% 41.2%
5015089 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 41.0 2.99e-01 89.0% 79.6%
3397645 5.1.4.85 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NOL11_N 0.51 42.0 2.92e-01 95.1% 48.1%
3696652 7580.1.1.1 a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.51 43.0 3.25e-01 97.6% 62.3%
1564338 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.50 41.0 2.96e-01 96.3% 91.5%
4976921 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.50 39.0 2.59e-01 84.1% 25.1%
4178970 4026.1.1.2 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Bud3_N 0.50 43.0 3.46e-01 100.0% 52.0%
4419373 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.50 42.0 2.78e-01 96.3% 78.8%
3410370 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.50 33.0 3.54e-01 100.0% 80.0%