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IMGVR_UViG_3300001322_000010-3300001322-A2665W6_1005944

Arc-Vir

IMGVR_UViG_3300001322_000010-3300001322-A2665W6_1005944

Quality

87.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-67
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13443.13 best HTH_26 23.9 5.40e-05 97.0% 61.9%
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.85 77.0 6.56e-01 100.0% 63.1%
2xi8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.85 75.0 7.54e-01 100.0% 95.5%
2ppxA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 63.0 6.52e-01 84.8% 85.2%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 68.0 6.17e-01 100.0% 66.3%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 73.0 7.36e-01 100.0% 97.0%
3pxpA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 76.0 6.66e-01 100.0% 87.1%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 67.0 6.56e-01 92.4% 83.1%
2kpjA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 73.0 7.18e-01 98.5% 92.9%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 73.0 7.07e-01 100.0% 90.5%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 67.0 6.95e-01 97.0% 100.0%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 71.0 7.05e-01 97.0% 92.8%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 69.0 6.95e-01 97.0% 95.5%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 70.0 6.95e-01 100.0% 94.1%
3zhiA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 69.0 6.72e-01 98.5% 98.6%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 70.0 6.31e-01 100.0% 75.6%
2ewtA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 69.0 6.78e-01 98.5% 94.4%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 70.0 6.46e-01 100.0% 82.4%
1x57A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 71.0 6.33e-01 100.0% 85.7%
3u3wA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 70.0 6.96e-01 100.0% 95.7%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 68.0 6.51e-01 98.5% 85.3%
4jcyA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 69.0 6.19e-01 100.0% 72.8%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 70.0 6.63e-01 100.0% 92.2%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 70.0 6.53e-01 100.0% 84.0%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 67.0 6.80e-01 100.0% 98.5%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 67.0 6.61e-01 98.5% 91.4%
3cecA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 69.0 6.20e-01 100.0% 75.8%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 63.0 6.06e-01 92.4% 78.9%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 61.0 6.16e-01 86.4% 90.8%
6b9sB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 64.0 6.22e-01 95.5% 84.9%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 64.0 6.11e-01 93.9% 82.9%
3qf3D00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 66.0 5.32e-01 100.0% 59.4%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 62.0 6.03e-01 92.4% 84.7%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 59.0 6.01e-01 87.9% 89.1%
2awiA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 64.0 6.44e-01 100.0% 97.0%
1lliA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 63.0 5.72e-01 98.5% 77.5%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 62.0 6.01e-01 100.0% 90.8%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 60.0 5.62e-01 100.0% 89.3%
3g7dA04 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 59.0 5.41e-01 100.0% 71.4%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 40.0 4.50e-01 95.5% 84.0%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 53.0 5.11e-01 98.5% 82.9%
1neqA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 50.0 4.89e-01 100.0% 85.1%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 3.96e-01 100.0% 60.0%
2mw8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.58 39.0 3.94e-01 90.9% 68.7%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 44.0 3.70e-01 86.4% 82.5%
1navA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.55 44.0 3.10e-01 93.9% 60.1%
4hluD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 43.0 3.05e-01 100.0% 61.2%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 45.0 4.41e-01 95.5% 88.6%
1vw4801 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.52 38.0 3.75e-01 84.8% 74.0%
1dulA00 1.10.260.30 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain 0.52 42.0 4.23e-01 98.5% 88.2%
1yhuB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 38.0 3.20e-01 89.4% 91.7%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5050903 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 77.0 7.33e-01 100.0% 82.7%
3282671 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 78.0 7.56e-01 100.0% 87.7%
3972189 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 75.0 7.22e-01 98.5% 84.0%
3988959 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 74.0 7.49e-01 98.5% 95.4%
3974079 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 80.0 6.66e-01 100.0% 62.9%
4084920 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.85 77.0 7.56e-01 100.0% 92.9%
3972208 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 75.0 7.16e-01 100.0% 85.3%
3588760 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 75.0 6.34e-01 100.0% 61.0%
4605318 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 77.0 7.32e-01 98.5% 86.7%
4234863 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.84 76.0 7.30e-01 100.0% 94.7%
3985012 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 74.0 7.10e-01 100.0% 84.0%
148652 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 77.0 6.89e-01 100.0% 75.3%
3988657 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.82 71.0 7.18e-01 100.0% 96.9%
3978391 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.82 74.0 7.27e-01 100.0% 92.9%
4031703 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.82 75.0 7.37e-01 100.0% 95.7%
3587807 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 70.0 7.06e-01 100.0% 95.4%
3944738 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 74.0 7.10e-01 100.0% 88.0%
3976255 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.81 73.0 7.02e-01 100.0% 88.0%
5071803 101.45.1.0 alpha arrays › HTH › DNA polymerase II large subunit DP2 helical domain › DNA polymerase II large subunit DP2 helical domain 0.80 74.0 6.72e-01 100.0% 89.4%
4010418 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 73.0 6.81e-01 100.0% 83.7%
3977590 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 72.0 6.90e-01 100.0% 89.3%
140568 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 68.0 6.77e-01 100.0% 92.6%
5039762 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 71.0 6.25e-01 100.0% 68.4%
3976148 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 71.0 6.22e-01 100.0% 69.4%
4656409 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 71.0 6.98e-01 100.0% 94.3%
4964308 101.1.4.94 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HVO_2718 0.79 67.0 6.78e-01 95.5% 93.8%
4173793 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 65.0 6.07e-01 100.0% 75.0%
2773 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 69.0 6.55e-01 100.0% 88.3%
4032484 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.77 58.0 6.09e-01 83.3% 88.3%
5083215 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.77 66.0 6.73e-01 100.0% 98.5%
4031147 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.77 59.0 6.19e-01 84.8% 90.0%
3965598 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.75 66.0 6.53e-01 100.0% 92.9%
3662968 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.75 61.0 6.34e-01 87.9% 100.0%
None 0.74 61.0 5.93e-01 92.4% 81.3%
3589834 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.74 57.0 5.74e-01 87.9% 83.1%
3987118 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 64.0 5.92e-01 98.5% 81.2%
4043777 101.1.4.16 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 0.73 66.0 5.92e-01 100.0% 81.1%
3587013 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 55.0 5.76e-01 84.8% 90.0%
3958941 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.72 57.0 5.39e-01 87.9% 71.2%
4993127 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.72 62.0 5.77e-01 98.5% 88.2%
4632225 101.1.4.27 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.71 63.0 5.79e-01 98.5% 76.5%
3291176 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.70 61.0 6.14e-01 98.5% 98.5%
167148 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 60.0 5.62e-01 100.0% 89.3%
3588180 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.69 58.0 5.25e-01 98.5% 74.7%
2767750 101.1.4.8 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Phage_CP76 0.68 58.0 5.43e-01 100.0% 76.2%
3931481 101.1.4.4 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.68 54.0 4.97e-01 89.4% 70.0%
4999897 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.68 57.0 5.57e-01 98.5% 89.3%
4004379 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.62 53.0 5.24e-01 100.0% 98.6%
5016974 7584.1.1.0 a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins 0.52 43.0 2.75e-01 90.9% 60.3%
3854689 110.1.1.0 alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.52 41.0 4.07e-01 98.5% 87.1%