Back to structures

IMGVR_UViG_3300001322_000010-3300001322-A2665W6_1005948

Arc-Vir

IMGVR_UViG_3300001322_000010-3300001322-A2665W6_1005948

Quality

75.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 75-169
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06725.18 best 3D 28.9 1.50e-06 66.3% 83.3%
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ae0X01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.84 79.0 6.22e-01 100.0% 61.7%
3czbA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.83 79.0 6.34e-01 100.0% 59.4%
2g5dA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.82 78.0 5.90e-01 100.0% 52.2%
1cr5A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.73 56.0 6.19e-01 98.9% 100.0%
1qcsA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.73 60.0 6.39e-01 100.0% 100.0%
4jcwA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.73 67.0 6.55e-01 100.0% 98.1%
4avrA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.71 65.0 6.57e-01 98.9% 100.0%
3sumB00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.71 64.0 5.65e-01 97.9% 88.2%
3d30A01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.71 65.0 6.26e-01 100.0% 94.4%
1wlfA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.68 55.0 5.88e-01 100.0% 97.6%
4ga6A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.66 53.0 5.58e-01 97.9% 98.8%
2zuoA08 2.30.30.620 Mainly Beta › Roll › SH3 type barrels. › 0.65 26.0 3.22e-01 76.8% 56.9%
1cz4A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.65 54.0 5.55e-01 100.0% 93.5%
2napA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.63 56.0 5.29e-01 96.8% 99.1%
1y5lA02 3.40.50.12440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 56.0 3.15e-01 100.0% 12.1%
7nz1G01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.61 54.0 5.40e-01 95.8% 100.0%
1g8kA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.61 55.0 4.87e-01 98.9% 84.4%
2iv2X04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.61 55.0 5.44e-01 98.9% 99.0%
3ougA00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.61 47.0 4.54e-01 100.0% 73.6%
1zc1A01 2.40.40.50 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain 0.61 55.0 5.36e-01 100.0% 94.2%
1q16A13 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.60 55.0 4.70e-01 100.0% 78.7%
2e7zA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.60 54.0 4.52e-01 100.0% 83.9%
1dmrA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.60 52.0 4.43e-01 98.9% 79.8%
2ki8A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.59 54.0 4.92e-01 100.0% 87.2%
8e9gG01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.58 50.0 5.02e-01 95.8% 100.0%
3lwcA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 29.0 2.90e-01 100.0% 44.7%
2l6oA01 2.40.10.320 Mainly Beta › Beta Barrel › Thrombin, subunit H › Uncharacterised protein PF13642 yp_926445, N-terminal domain 0.55 31.0 3.46e-01 85.3% 69.4%
3zo9B03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 37.0 3.76e-01 100.0% 69.5%
4ba0A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 30.0 3.79e-01 95.8% 100.0%
1uasA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 35.0 3.60e-01 100.0% 75.0%
2greF02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.50 38.0 4.06e-01 97.9% 100.0%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5083293 1.1.2.13 beta barrels › cradle loop barrel › RIFT-related › double psi › 3D 0.90 84.0 8.07e-01 100.0% 88.6%
4116949 1.1.2.13 beta barrels › cradle loop barrel › RIFT-related › double psi › 3D 0.87 82.0 6.13e-01 100.0% 54.8%
3267279 1.1.2.41 beta barrels › cradle loop barrel › RIFT-related › double psi › PF28663 0.86 81.0 7.41e-01 100.0% 96.7%
1567466 1.1.2.13 beta barrels › cradle loop barrel › RIFT-related › double psi › 3D 0.86 76.0 6.43e-01 92.6% 65.1%
4623574 1.1.2.13 beta barrels › cradle loop barrel › RIFT-related › double psi › 3D 0.85 79.0 7.82e-01 98.9% 93.0%
3282133 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.84 79.0 6.26e-01 100.0% 99.4%
4294281 1.1.2.43 beta barrels › cradle loop barrel › RIFT-related › double psi › PF31189 0.84 79.0 7.48e-01 98.9% 99.1%
4540120 1.1.2.13 beta barrels › cradle loop barrel › RIFT-related › double psi › 3D 0.84 80.0 6.13e-01 100.0% 56.3%
3695373 1.1.2.41 beta barrels › cradle loop barrel › RIFT-related › double psi › PF28663 0.83 77.0 6.56e-01 100.0% 90.6%
4927749 1.1.2.13 beta barrels › cradle loop barrel › RIFT-related › double psi › 3D 0.79 69.0 6.97e-01 93.7% 100.0%
4419943 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.74 69.0 6.78e-01 100.0% 95.0%
4299713 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 68.0 6.55e-01 100.0% 99.0%
3274054 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 67.0 6.17e-01 100.0% 86.7%
4115281 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 68.0 6.24e-01 100.0% 99.2%
3277741 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.72 67.0 6.27e-01 100.0% 84.3%
3720989 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 67.0 6.36e-01 100.0% 94.5%
3976753 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.72 65.0 5.54e-01 100.0% 62.0%
4370157 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.72 66.0 5.73e-01 100.0% 68.5%
3165363 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.72 66.0 5.44e-01 100.0% 58.2%
4963913 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 56.0 6.05e-01 97.9% 97.5%
3187650 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.71 66.0 6.16e-01 100.0% 95.7%
3726745 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.71 65.0 6.37e-01 100.0% 100.0%
349867 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.71 65.0 6.17e-01 100.0% 91.1%
3010131 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.71 66.0 6.32e-01 100.0% 94.4%
3974469 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.71 64.0 6.49e-01 98.9% 98.9%
5054391 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.70 57.0 6.05e-01 98.9% 97.6%
1883479 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.69 58.0 6.01e-01 100.0% 95.6%
4970875 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.69 57.0 5.98e-01 98.9% 97.6%
4941448 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.69 56.0 5.96e-01 97.9% 97.6%
4488210 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.69 56.0 5.89e-01 97.9% 96.5%
4931749 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.69 56.0 5.94e-01 97.9% 97.6%
4263053 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 56.0 5.90e-01 97.9% 97.6%
5041263 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 56.0 5.88e-01 97.9% 97.6%
4986590 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 55.0 5.82e-01 97.9% 96.5%
4445483 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.68 55.0 5.85e-01 97.9% 97.6%
4981335 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 56.0 5.91e-01 97.9% 98.8%
4970929 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 56.0 5.87e-01 98.9% 98.8%
5069203 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 57.0 5.85e-01 100.0% 95.6%
4346976 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 54.0 5.72e-01 100.0% 96.5%
5076635 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 55.0 5.85e-01 98.9% 98.8%
4200720 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 55.0 5.84e-01 97.9% 97.6%
3740563 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 59.0 5.95e-01 100.0% 94.7%
3391397 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 56.0 5.77e-01 100.0% 94.4%
3602941 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 55.0 5.77e-01 98.9% 97.6%
5028227 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 56.0 5.91e-01 97.9% 100.0%
4396535 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 52.0 5.67e-01 98.9% 98.8%
4011221 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 61.0 4.97e-01 98.9% 57.5%
4995354 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.66 55.0 5.82e-01 97.9% 98.8%
4670243 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.66 61.0 6.03e-01 100.0% 95.0%
4526788 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.66 53.0 5.68e-01 96.8% 100.0%
4946804 1.1.2.44 beta barrels › cradle loop barrel › RIFT-related › double psi › Glycos_trans_3N 0.66 54.0 5.70e-01 98.9% 98.8%
4024752 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.65 54.0 5.33e-01 98.9% 84.0%
4938514 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.65 52.0 5.53e-01 95.8% 96.5%
4946372 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.64 54.0 5.12e-01 90.5% 90.0%
2776332 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.64 57.0 5.12e-01 97.9% 84.0%
4954217 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.63 56.0 4.86e-01 98.9% 74.7%
3386113 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.63 57.0 5.54e-01 98.9% 94.3%
4986896 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.63 53.0 5.00e-01 90.5% 93.9%
4048983 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.63 57.0 5.55e-01 100.0% 96.2%
4986899 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.62 52.0 5.12e-01 89.5% 85.0%
4081390 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.62 44.0 4.94e-01 94.7% 100.0%
3463336 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.62 56.0 5.52e-01 98.9% 97.0%
4890564 101.1.2.869 alpha arrays › HTH › HTH › winged helix domain › IML1_N 0.62 49.0 5.26e-01 97.9% 100.0%
4014411 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.62 55.0 5.53e-01 100.0% 97.9%
3927447 1.1.2.8 beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.62 56.0 5.32e-01 100.0% 90.9%
4362257 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.62 55.0 5.34e-01 97.9% 99.0%
4639326 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.61 47.0 4.55e-01 100.0% 72.7%
4027672 1.1.2.8 beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.60 54.0 5.22e-01 100.0% 88.6%
4245831 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.60 48.0 4.20e-01 100.0% 57.9%
4087090 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.60 47.0 4.17e-01 100.0% 59.3%
3789369 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.60 53.0 5.30e-01 100.0% 95.0%
4885884 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.60 53.0 4.87e-01 98.9% 94.4%
5045656 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.60 53.0 4.78e-01 98.9% 87.2%
4122334 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.59 47.0 4.15e-01 100.0% 57.9%
3284381 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.59 50.0 4.95e-01 92.6% 93.0%
4102554 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.59 52.0 5.06e-01 97.9% 98.1%
4145927 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.59 46.0 4.11e-01 100.0% 59.3%
4021338 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.59 53.0 5.22e-01 100.0% 97.0%
4669978 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.59 46.0 4.33e-01 100.0% 68.1%
2790651 12.1.1.50 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_31_3rd 0.58 34.0 3.52e-01 100.0% 60.2%
3605376 1.1.2.8 beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.58 51.0 5.11e-01 100.0% 97.9%
4485138 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.57 47.0 4.32e-01 100.0% 68.0%
4040376 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.57 47.0 4.25e-01 100.0% 65.4%
3882461 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.52 34.0 3.78e-01 100.0% 86.7%
4421885 12.1.1.52 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › GLGE_C 0.50 37.0 3.61e-01 100.0% 71.4%