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IMGVR_UViG_3300001344_000070-3300001344-JGI20152J14361_1000149815
Arc-VirIMGVR_UViG_3300001344_000070-3300001344-JGI20152J14361_1000149815
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-52
Domain cluster:
rep: LacPavin_0818_WC55_scaffold_2946_prodigal-single.1__X__X__00057__D2-52
CATH (67)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a6qA01 | 3.40.1620.10 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › YefM-like domain | 0.92 | 65.0 | 7.06e-01 | 74.5% | 90.7% |
| 3hryA01 | 3.40.1620.10 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › YefM-like domain | 0.85 | 72.0 | 7.42e-01 | 92.2% | 95.9% |
| 2odkA00 | 3.40.1620.10 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › YefM-like domain | 0.79 | 67.0 | 6.77e-01 | 92.2% | 94.0% |
| 2crqA01 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.74 | 52.0 | 4.43e-01 | 76.5% | 97.7% |
| 4bl8B03 | 3.30.1360.230 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Sufu, C-terminal domain | 0.71 | 59.0 | 4.43e-01 | 96.1% | 56.8% |
| 4o1gA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.70 | 55.0 | 3.36e-01 | 86.3% | 14.2% |
| 2c4eA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.68 | 53.0 | 3.29e-01 | 86.3% | 15.1% |
| 4p22A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.68 | 52.0 | 3.49e-01 | 88.2% | 26.0% |
| 2yzsA01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.68 | 49.0 | 4.32e-01 | 80.4% | 51.2% |
| 4n06A01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.67 | 49.0 | 4.29e-01 | 84.3% | 51.2% |
| 1q0sA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 45.0 | 3.30e-01 | 72.5% | 50.7% |
| 5hsgA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 43.0 | 3.08e-01 | 78.4% | 21.9% |
| 3zihA00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.66 | 50.0 | 4.44e-01 | 86.3% | 88.6% |
| 1r0vA01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.64 | 49.0 | 4.28e-01 | 82.4% | 55.8% |
| 2gjwC01 | 3.40.1350.150 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.64 | 48.0 | 3.53e-01 | 82.4% | 30.7% |
| 1gcbA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.63 | 45.0 | 2.70e-01 | 78.4% | 27.3% |
| 1v1aA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.63 | 46.0 | 2.86e-01 | 80.4% | 14.3% |
| 2dcnA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.62 | 46.0 | 2.87e-01 | 80.4% | 15.3% |
| 3pc3A03 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.62 | 49.0 | 3.56e-01 | 88.2% | 31.9% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.62 | 45.0 | 3.84e-01 | 82.4% | 70.3% |
| 3orgA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.61 | 45.0 | 3.51e-01 | 84.3% | 37.3% |
| 5lvxC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 44.0 | 3.52e-01 | 78.4% | 62.0% |
| 1hbxA01 | 3.40.1810.10 | Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box | 0.61 | 42.0 | 3.85e-01 | 74.5% | 57.7% |
| 6aikB00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.61 | 45.0 | 2.81e-01 | 80.4% | 14.9% |
| 3lhxA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.61 | 47.0 | 2.94e-01 | 86.3% | 16.3% |
| 2rbcA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.60 | 44.0 | 2.75e-01 | 80.4% | 16.3% |
| 1wtjA02 | 3.30.1370.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain | 0.60 | 48.0 | 3.44e-01 | 100.0% | 88.0% |
| 4e84B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.60 | 44.0 | 2.78e-01 | 80.4% | 17.1% |
| 3ry7A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.60 | 44.0 | 2.78e-01 | 80.4% | 17.5% |
| 2abqA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.59 | 43.0 | 2.72e-01 | 80.4% | 17.4% |
| 4g6vA00 | 3.40.1350.120 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.59 | 42.0 | 3.18e-01 | 76.5% | 33.3% |
| 5dm6S01 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.59 | 41.0 | 3.55e-01 | 74.5% | 77.9% |
| 1feuA01 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.59 | 42.0 | 3.59e-01 | 78.4% | 76.9% |
| 2pvpA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 42.0 | 3.31e-01 | 78.4% | 39.5% |
| 1eblA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.58 | 42.0 | 3.11e-01 | 80.4% | 52.4% |
| 3n29B01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.58 | 44.0 | 3.27e-01 | 88.2% | 97.4% |
| 1gefA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.58 | 42.0 | 3.30e-01 | 80.4% | 40.8% |
| 2zyzC00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.58 | 48.0 | 4.02e-01 | 98.0% | 59.4% |
| 3qtgA03 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.57 | 40.0 | 3.21e-01 | 76.5% | 72.2% |
| 2q2eB01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.57 | 40.0 | 2.73e-01 | 78.4% | 33.9% |
| 2xbkA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.57 | 47.0 | 2.86e-01 | 100.0% | 86.2% |
| 3lwbA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 39.0 | 3.22e-01 | 76.5% | 39.1% |
| 2j9lF01 | 3.90.1280.20 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › | 0.57 | 43.0 | 3.88e-01 | 88.2% | 58.9% |
| 4k7cA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 45.0 | 2.75e-01 | 94.1% | 81.0% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 38.0 | 3.09e-01 | 72.5% | 53.8% |
| 2b78A02 | 3.30.750.80 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › RNA methyltransferase domain (HRMD) like | 0.55 | 40.0 | 3.31e-01 | 78.4% | 45.1% |
| 3ocmB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.55 | 44.0 | 3.32e-01 | 96.1% | 37.7% |
| 1wxrA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 43.0 | 2.80e-01 | 90.2% | 64.6% |
| 2dsiA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.55 | 42.0 | 3.24e-01 | 98.0% | 82.8% |
| 3hf7A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 38.0 | 2.99e-01 | 78.4% | 32.3% |
| 2ypdB01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.54 | 41.0 | 2.60e-01 | 86.3% | 68.9% |
| 6xwlE02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 40.0 | 3.04e-01 | 88.2% | 30.7% |
| 3oi8A01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 40.0 | 3.41e-01 | 86.3% | 47.3% |
| 3fhmA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 40.0 | 3.08e-01 | 86.3% | 63.2% |
| 4hr6B02 | 4.10.470.10 | Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 | 0.54 | 38.0 | 3.37e-01 | 80.4% | 54.7% |
| 5c40B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 38.0 | 2.43e-01 | 80.4% | 16.7% |
| 5iipA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 39.0 | 3.15e-01 | 88.2% | 37.1% |
| 3ctuA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 39.0 | 2.95e-01 | 88.2% | 29.7% |
| 6xzqA01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.53 | 36.0 | 2.71e-01 | 78.4% | 24.1% |
| 6n2aA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.53 | 40.0 | 2.93e-01 | 92.2% | 62.4% |
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 3.75e-01 | 96.1% | 65.2% |
| 3ieyB00 | 3.40.1350.150 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.53 | 38.0 | 2.97e-01 | 90.2% | 46.1% |
| 1a79A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 38.0 | 3.29e-01 | 88.2% | 50.0% |
| 3i4tA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.51 | 40.0 | 3.10e-01 | 98.0% | 84.2% |
| 1vypX00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 35.0 | 2.19e-01 | 74.5% | 34.3% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 34.0 | 2.70e-01 | 72.5% | 48.1% |
| 1kqfA02 | 3.40.50.740 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 40.0 | 2.68e-01 | 94.1% | 45.2% |
ECOD (74)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3956773 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.91 | 72.0 | 6.07e-01 | 84.3% | 53.8% |
| 3954312 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.89 | 66.0 | 7.37e-01 | 78.4% | 100.0% |
| 4169084 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.88 | 66.0 | 5.82e-01 | 82.4% | 57.1% |
| 3953259 | 4267.1.1.0 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like | 0.88 | 71.0 | 6.68e-01 | 86.3% | 78.3% |
| 4358836 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.85 | 73.0 | 6.18e-01 | 92.2% | 60.0% |
| 3944219 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.85 | 73.0 | 6.45e-01 | 92.2% | 67.1% |
| 3952396 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.84 | 74.0 | 6.55e-01 | 94.1% | 74.3% |
| 4611720 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.84 | 72.0 | 6.05e-01 | 92.2% | 60.0% |
| 397699 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.83 | 71.0 | 6.28e-01 | 92.2% | 65.3% |
| 2629018 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.83 | 70.0 | 5.69e-01 | 92.2% | 52.2% |
| 2649940 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.82 | 70.0 | 6.63e-01 | 92.2% | 81.4% |
| 3281080 | 4267.1.1.0 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like | 0.81 | 70.0 | 6.61e-01 | 94.1% | 85.0% |
| 3955595 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.80 | 71.0 | 6.95e-01 | 96.1% | 100.0% |
| 4992373 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.80 | 68.0 | 5.64e-01 | 92.2% | 55.3% |
| 3287302 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.79 | 67.0 | 5.95e-01 | 92.2% | 68.6% |
| 5038175 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.75 | 51.0 | 4.36e-01 | 80.4% | 45.0% |
| 3282490 | 4267.1.1.0 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like | 0.73 | 60.0 | 5.77e-01 | 92.2% | 78.3% |
| 4116478 | 4126.1.1.6 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › DabA | 0.73 | 50.0 | 3.38e-01 | 72.5% | 22.1% |
| 4430876 | 4126.1.1.6 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › DabA | 0.73 | 50.0 | 3.19e-01 | 72.5% | 16.9% |
| 4945135 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 52.0 | 3.75e-01 | 78.4% | 27.3% |
| 3385734 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.71 | 63.0 | 5.82e-01 | 100.0% | 81.5% |
| 4985460 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.69 | 54.0 | 3.35e-01 | 86.3% | 14.7% |
| 1874314 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.67 | 51.0 | 3.67e-01 | 86.3% | 28.9% |
| 4948156 | 2004.5.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain | 0.66 | 50.0 | 3.29e-01 | 86.3% | 50.6% |
| 3174811 | 2008.2.1.2 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › Sen15 | 0.66 | 54.0 | 4.11e-01 | 92.2% | 48.0% |
| 5064069 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.66 | 48.0 | 4.20e-01 | 78.4% | 51.2% |
| 4170201 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.65 | 48.0 | 4.01e-01 | 82.4% | 49.5% |
| 5033302 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.65 | 47.0 | 3.93e-01 | 80.4% | 52.6% |
| 4956650 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.65 | 47.0 | 3.79e-01 | 78.4% | 45.0% |
| 4609520 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.64 | 48.0 | 2.96e-01 | 86.3% | 14.1% |
| 4941326 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.64 | 49.0 | 3.93e-01 | 84.3% | 49.5% |
| 5007352 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.64 | 49.0 | 4.13e-01 | 82.4% | 50.6% |
| 1392754 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.63 | 47.0 | 3.90e-01 | 82.4% | 49.5% |
| 3413902 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.62 | 46.0 | 3.70e-01 | 80.4% | 43.1% |
| 5000875 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.62 | 45.0 | 3.77e-01 | 78.4% | 50.0% |
| 141372 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.62 | 46.0 | 3.89e-01 | 82.4% | 56.0% |
| 4332382 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.62 | 45.0 | 3.44e-01 | 78.4% | 51.3% |
| 2756766 | 2008.2.1.2 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › Sen15 | 0.62 | 53.0 | 3.96e-01 | 100.0% | 47.0% |
| 2581340 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.61 | 45.0 | 3.77e-01 | 78.4% | 46.0% |
| 4988642 | 2004.1.1.260 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MEDS | 0.61 | 44.0 | 3.14e-01 | 80.4% | 96.5% |
| 5017115 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.61 | 46.0 | 3.24e-01 | 88.2% | 33.2% |
| 4928680 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 43.0 | 2.96e-01 | 78.4% | 25.8% |
| 5048373 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.59 | 44.0 | 3.62e-01 | 84.3% | 49.5% |
| 2320713 | 3148.1.1.2 ↗ | a+b two layers › putative secreted protein PA3611 › putative secreted protein PA3611 › putative secreted protein PA3611 › T2SSS_2 | 0.59 | 42.0 | 3.69e-01 | 78.4% | 58.3% |
| 4864783 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.59 | 46.0 | 2.85e-01 | 100.0% | 86.3% |
| 4129323 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.58 | 41.0 | 3.53e-01 | 78.4% | 78.9% |
| 3252502 | 2008.2.1.2 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › Sen15 | 0.58 | 45.0 | 3.43e-01 | 84.3% | 44.4% |
| 3364928 | 2007.2.3.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase | 0.58 | 46.0 | 2.83e-01 | 96.1% | 58.4% |
| 3348286 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.58 | 46.0 | 3.32e-01 | 88.2% | 44.0% |
| 4285300 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.58 | 40.0 | 3.46e-01 | 78.4% | 78.9% |
| 1171244 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.58 | 48.0 | 4.02e-01 | 98.0% | 59.4% |
| 3704350 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.57 | 43.0 | 3.27e-01 | 86.3% | 32.4% |
| 3212014 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.57 | 39.0 | 2.79e-01 | 76.5% | 35.3% |
| 3321517 | 2007.2.3.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase | 0.57 | 44.0 | 2.73e-01 | 96.1% | 48.2% |
| 5041646 | 2006.1.4.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 | 0.57 | 41.0 | 3.13e-01 | 80.4% | 94.8% |
| 3285167 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.57 | 47.0 | 3.25e-01 | 100.0% | 78.0% |
| 5039168 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.57 | 40.0 | 3.34e-01 | 76.5% | 50.5% |
| 5036485 | 3688.1.1.0 ↗ | a+b two layers › N-terminal subdomain in UbiD middle domain › N-terminal subdomain in UbiD middle domain › N-terminal subdomain in UbiD middle domain | 0.56 | 42.0 | 3.84e-01 | 84.3% | 60.0% |
| 4215561 | 219.1.1.17 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1_2 | 0.56 | 46.0 | 2.70e-01 | 94.1% | 72.5% |
| 4994452 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.56 | 41.0 | 3.56e-01 | 88.2% | 52.6% |
| 3822479 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.55 | 42.0 | 3.57e-01 | 86.3% | 51.1% |
| 5011455 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.55 | 38.0 | 3.48e-01 | 78.4% | 57.5% |
| 2392643 | 2008.1.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Flu_PA | 0.54 | 37.0 | 2.55e-01 | 80.4% | 17.3% |
| 3783278 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.54 | 42.0 | 2.90e-01 | 88.2% | 23.6% |
| 3380863 | 2007.2.3.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase | 0.54 | 43.0 | 2.42e-01 | 96.1% | 23.3% |
| 3715658 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.54 | 39.0 | 2.61e-01 | 82.4% | 93.2% |
| 3641260 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.53 | 38.0 | 2.89e-01 | 78.4% | 31.9% |
| 5005971 | 304.48.1.31 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Cas10-Cmr2_palm2 | 0.51 | 38.0 | 2.19e-01 | 88.2% | 11.8% |
| 3586428 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.51 | 42.0 | 3.46e-01 | 100.0% | 97.2% |
| 1308679 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 35.0 | 3.42e-01 | 78.4% | 65.1% |
| 3605286 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.51 | 36.0 | 3.11e-01 | 82.4% | 67.0% |
| 3282565 | 7579.1.1.118 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9, FrsA-like | 0.51 | 37.0 | 2.27e-01 | 82.4% | 24.3% |
| 3213493 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 40.0 | 2.57e-01 | 96.1% | 41.3% |
| 1311291 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.51 | 35.0 | 3.05e-01 | 78.4% | 42.3% |