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IMGVR_UViG_3300001345_000041-3300001345-JGI20171J14444_10011305
Arc-VirIMGVR_UViG_3300001345_000041-3300001345-JGI20171J14444_10011305
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-94
Domain cluster:
rep: IMGVR_UViG_3300007161_000012-3300007161-Ga0099839_1553071__D1-105
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ag6A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.86 | 80.0 | 5.72e-01 | 98.9% | 38.5% |
| 1e9rD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 68.0 | 4.67e-01 | 96.8% | 29.2% |
| 3bosB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 60.0 | 4.93e-01 | 91.5% | 48.1% |
| 5kwaA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.75 | 61.0 | 4.93e-01 | 92.6% | 47.9% |
| 2qbyB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 64.0 | 5.15e-01 | 94.7% | 57.7% |
| 1jqlB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 57.0 | 5.02e-01 | 91.5% | 57.9% |
| 4lyaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 59.0 | 4.16e-01 | 92.6% | 35.1% |
| 4dgfA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.69 | 55.0 | 5.10e-01 | 95.7% | 66.4% |
| 3co5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 53.0 | 4.68e-01 | 87.2% | 56.0% |
| 7jpoE01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 59.0 | 4.92e-01 | 93.6% | 65.8% |
| 4n1aB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 60.0 | 4.22e-01 | 98.9% | 35.1% |
| 3lloA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.68 | 52.0 | 4.67e-01 | 91.5% | 59.1% |
| 4lj3A00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.67 | 59.0 | 4.36e-01 | 100.0% | 66.8% |
| 2fb6A00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.67 | 53.0 | 4.98e-01 | 91.5% | 69.8% |
| 1l8qA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 56.0 | 4.64e-01 | 92.6% | 52.7% |
| 4nh0A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 56.0 | 4.22e-01 | 95.7% | 49.6% |
| 2fnaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 58.0 | 4.52e-01 | 97.9% | 65.0% |
| 1shuX00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.65 | 57.0 | 4.58e-01 | 95.7% | 79.0% |
| 2g9zA02 | 3.40.50.10240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain | 0.64 | 47.0 | 3.83e-01 | 75.5% | 95.9% |
| 6pwkA02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.64 | 55.0 | 4.17e-01 | 95.7% | 49.8% |
| 3thxB05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 48.0 | 3.52e-01 | 89.4% | 29.6% |
| 3p0hB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.63 | 48.0 | 3.36e-01 | 80.9% | 31.6% |
| 3pfmA00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.63 | 54.0 | 4.05e-01 | 95.7% | 44.9% |
| 5i45A00 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.63 | 41.0 | 3.29e-01 | 72.3% | 32.3% |
| 4l22A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 48.0 | 3.32e-01 | 85.1% | 56.4% |
| 4u3aB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 49.0 | 3.47e-01 | 87.2% | 31.3% |
| 5y58A01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.61 | 54.0 | 4.13e-01 | 100.0% | 45.3% |
| 3lm3A01 | 3.20.20.510 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Uncharacterised protein PF12979, DUF3863 | 0.60 | 51.0 | 3.63e-01 | 95.7% | 31.8% |
| 2j5vB01 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.60 | 43.0 | 3.29e-01 | 75.5% | 52.4% |
| 4c6rA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.60 | 51.0 | 4.32e-01 | 95.7% | 76.5% |
| 3bxwA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 50.0 | 3.68e-01 | 95.7% | 51.1% |
| 2kg4A00 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.59 | 46.0 | 3.84e-01 | 84.0% | 72.7% |
| 1jeyA01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.57 | 50.0 | 3.94e-01 | 98.9% | 85.1% |
| 4aq4A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 47.0 | 3.66e-01 | 91.5% | 87.0% |
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 42.0 | 3.79e-01 | 79.8% | 59.4% |
| 3c3jA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.55 | 49.0 | 3.90e-01 | 100.0% | 72.2% |
| 1r6uA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 46.0 | 3.44e-01 | 96.8% | 56.2% |
| 4fwiB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 46.0 | 3.22e-01 | 94.7% | 40.6% |
| 2hpvA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.53 | 46.0 | 3.65e-01 | 97.9% | 75.8% |
| 2kdxA00 | 3.30.2320.80 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › | 0.52 | 37.0 | 3.42e-01 | 76.6% | 58.0% |
| 1j5xA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.52 | 46.0 | 3.91e-01 | 100.0% | 77.8% |
| 2g29A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 40.0 | 3.05e-01 | 87.2% | 89.9% |
| 5c3mC01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 41.0 | 3.48e-01 | 90.4% | 93.4% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5057476 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.95 | 83.0 | 5.25e-01 | 95.7% | 21.8% |
| 4927615 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.95 | 89.0 | 5.77e-01 | 96.8% | 28.7% |
| 4964260 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.93 | 81.0 | 5.54e-01 | 96.8% | 30.6% |
| 4940729 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.91 | 79.0 | 4.95e-01 | 95.7% | 20.3% |
| 5056660 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.91 | 79.0 | 5.03e-01 | 95.7% | 22.4% |
| 5011282 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.86 | 73.0 | 4.68e-01 | 96.8% | 22.1% |
| 5025627 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.86 | 72.0 | 5.13e-01 | 96.8% | 33.2% |
| 4075979 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.85 | 75.0 | 4.68e-01 | 98.9% | 19.3% |
| 3839711 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.85 | 75.0 | 4.32e-01 | 98.9% | 11.6% |
| 5043928 | 2004.1.1.277 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › HerA_C | 0.84 | 70.0 | 5.73e-01 | 92.6% | 51.2% |
| 3949071 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.84 | 74.0 | 4.64e-01 | 98.9% | 20.0% |
| 3839135 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.84 | 74.0 | 4.69e-01 | 95.7% | 21.5% |
| 4079762 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.83 | 72.0 | 4.55e-01 | 97.9% | 20.7% |
| 3590906 | 2004.1.1.342 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_10 | 0.83 | 71.0 | 4.46e-01 | 100.0% | 19.3% |
| 5013271 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.82 | 68.0 | 4.28e-01 | 92.6% | 18.9% |
| 4395264 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.82 | 70.0 | 4.43e-01 | 95.7% | 19.5% |
| 3587856 | 2004.1.1.342 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_10 | 0.81 | 76.0 | 4.81e-01 | 100.0% | 23.1% |
| None | — | 0.81 | 72.0 | 4.62e-01 | 95.7% | 22.2% | |
| 3838354 | 2004.1.1.63 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FtsK_SpoIIIE | 0.81 | 71.0 | 4.51e-01 | 95.7% | 20.7% |
| 5024661 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.80 | 70.0 | 5.09e-01 | 95.7% | 36.7% |
| 4966167 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.80 | 73.0 | 4.60e-01 | 97.9% | 20.9% |
| 4184608 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.80 | 69.0 | 4.33e-01 | 97.9% | 19.6% |
| 4594137 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.80 | 69.0 | 4.35e-01 | 97.9% | 20.0% |
| 3949072 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.78 | 67.0 | 4.28e-01 | 97.9% | 19.8% |
| 3505219 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.78 | 72.0 | 4.41e-01 | 100.0% | 21.5% |
| 3947820 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.77 | 55.0 | 4.81e-01 | 93.6% | 50.0% |
| 3968443 | 2004.1.1.35 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA | 0.75 | 59.0 | 4.83e-01 | 93.6% | 47.3% |
| 3961659 | 2004.1.1.63 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FtsK_SpoIIIE | 0.75 | 57.0 | 4.79e-01 | 80.9% | 67.7% |
| 3283656 | 2004.1.1.342 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_10 | 0.74 | 67.0 | 4.28e-01 | 98.9% | 23.8% |
| 3839002 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.74 | 59.0 | 4.44e-01 | 88.3% | 36.4% |
| 3952620 | 2004.1.1.63 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FtsK_SpoIIIE | 0.74 | 66.0 | 4.62e-01 | 98.9% | 39.7% |
| 4086040 | 2004.1.1.63 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FtsK_SpoIIIE | 0.72 | 61.0 | 4.45e-01 | 92.6% | 39.6% |
| 3608800 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.72 | 62.0 | 4.85e-01 | 92.6% | 57.9% |
| 3350708 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.70 | 57.0 | 5.54e-01 | 94.7% | 80.0% |
| 3659784 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 59.0 | 3.64e-01 | 92.6% | 17.7% |
| 3972136 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.69 | 61.0 | 4.50e-01 | 100.0% | 68.9% |
| 4965018 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 53.0 | 3.85e-01 | 94.7% | 30.2% |
| 3942767 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.68 | 58.0 | 4.62e-01 | 93.6% | 48.4% |
| 4952144 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.68 | 55.0 | 4.90e-01 | 95.7% | 61.5% |
| 4406063 | 2004.1.1.35 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA | 0.67 | 58.0 | 4.62e-01 | 92.6% | 49.4% |
| 3977807 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.67 | 58.0 | 4.69e-01 | 95.7% | 63.4% |
| 4655619 | 2004.1.1.68 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IstB_IS21 | 0.67 | 56.0 | 4.44e-01 | 90.4% | 47.4% |
| 4323365 | 2004.1.1.68 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IstB_IS21 | 0.67 | 56.0 | 4.43e-01 | 90.4% | 47.9% |
| 4537420 | 2004.1.1.68 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IstB_IS21 | 0.67 | 56.0 | 4.10e-01 | 90.4% | 37.1% |
| 4241558 | 2004.1.1.35 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA | 0.67 | 57.0 | 4.44e-01 | 92.6% | 43.5% |
| 159584 | 7545.1.1.0 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like | 0.67 | 53.0 | 4.98e-01 | 91.5% | 69.8% |
| 3616981 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.66 | 56.0 | 4.41e-01 | 92.6% | 65.6% |
| 4479403 | 2004.1.1.68 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IstB_IS21 | 0.66 | 56.0 | 4.12e-01 | 91.5% | 37.5% |
| 4145615 | 2004.1.1.35 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA | 0.66 | 56.0 | 4.06e-01 | 92.6% | 34.4% |
| 4855248 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.65 | 46.0 | 4.46e-01 | 93.6% | 65.1% |
| 3955250 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.65 | 55.0 | 5.44e-01 | 92.6% | 96.0% |
| 3260523 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 50.0 | 4.61e-01 | 84.0% | 67.2% |
| 3654710 | 2003.1.6.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › SHMT | 0.64 | 45.0 | 4.00e-01 | 74.5% | 95.7% |
| 3391993 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.63 | 56.0 | 3.60e-01 | 100.0% | 52.0% |
| 3292719 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.63 | 43.0 | 3.36e-01 | 71.3% | 32.9% |
| 4085547 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.61 | 44.0 | 3.23e-01 | 76.6% | 45.6% |
| 3797442 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.61 | 53.0 | 4.18e-01 | 98.9% | 86.2% |
| 3665667 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.61 | 45.0 | 3.27e-01 | 77.7% | 42.6% |
| 4113346 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.61 | 53.0 | 4.17e-01 | 100.0% | 94.3% |
| 4002667 | 2006.1.6.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N | 0.60 | 53.0 | 4.08e-01 | 98.9% | 87.3% |
| 4160313 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.60 | 45.0 | 3.28e-01 | 79.8% | 45.2% |
| 4665962 | 7531.1.1.0 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like | 0.60 | 44.0 | 3.24e-01 | 77.7% | 46.9% |
| 4404588 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.60 | 44.0 | 3.15e-01 | 77.7% | 47.5% |
| 3382550 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 49.0 | 3.78e-01 | 93.6% | 38.6% |
| 3511749 | 2006.1.6.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N | 0.60 | 53.0 | 4.42e-01 | 100.0% | 83.6% |
| 3611636 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.56 | 43.0 | 2.95e-01 | 84.0% | 85.9% |
| 3879317 | 2003.1.1.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ISPD_C | 0.54 | 44.0 | 3.67e-01 | 88.3% | 62.5% |
| 3240439 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.52 | 43.0 | 2.99e-01 | 91.5% | 80.6% |
| 3416575 | 2007.1.4.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › DAGK_cat | 0.51 | 37.0 | 3.03e-01 | 76.6% | 56.5% |
| 4071505 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.50 | 44.0 | 3.19e-01 | 98.9% | 86.5% |
D2
medium
residues 95-165
Domain cluster:
rep: js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00238__D764-829
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ag6A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.85 | 67.0 | 4.49e-01 | 83.1% | 24.2% |
| 4kfuA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 56.0 | 3.97e-01 | 78.9% | 26.3% |
| 2egtA01 | 6.20.50.50 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.74 | 29.0 | 4.14e-01 | 70.4% | 88.9% |
| 3t0pA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.68 | 32.0 | 2.41e-01 | 84.5% | 18.6% |
| 3kihC01 | 2.20.25.510 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.66 | 30.0 | 3.87e-01 | 78.9% | 82.4% |
| 5agvA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.63 | 43.0 | 3.64e-01 | 71.8% | 80.6% |
| 4omfB02 | 3.10.450.750 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 28.0 | 3.31e-01 | 73.2% | 59.6% |
| 1dw9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.57 | 42.0 | 3.97e-01 | 78.9% | 80.5% |
| 4trtA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.57 | 38.0 | 3.31e-01 | 70.4% | 83.2% |
| 1d1lA00 | 3.30.240.10 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › CRO Repressor | 0.56 | 41.0 | 4.35e-01 | 80.3% | 98.4% |
| 3c4nA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.55 | 38.0 | 3.28e-01 | 74.6% | 62.4% |
| 6l2cB00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.54 | 45.0 | 2.85e-01 | 94.4% | 95.5% |
| 2p6rA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 39.0 | 2.97e-01 | 87.3% | 62.8% |
| 3d5pA00 | 3.40.1580.10 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like | 0.51 | 38.0 | 3.14e-01 | 80.3% | 57.9% |
| 3ctkA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.50 | 37.0 | 2.91e-01 | 80.3% | 49.1% |
| 4mbsA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.50 | 36.0 | 2.44e-01 | 80.3% | 84.1% |
| 1ni5A02 | 1.20.59.20 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › | 0.50 | 34.0 | 3.29e-01 | 71.8% | 77.9% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927615 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.93 | 77.0 | 4.74e-01 | 85.9% | 18.2% |
| 5057476 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.90 | 84.0 | 5.09e-01 | 100.0% | 18.5% |
| 4940186 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.89 | 61.0 | 3.76e-01 | 71.8% | 16.0% |
| 4940729 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.88 | 80.0 | 4.83e-01 | 98.6% | 16.7% |
| 5056660 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.87 | 80.0 | 4.91e-01 | 100.0% | 19.5% |
| 151086 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.84 | 66.0 | 4.04e-01 | 83.1% | 15.8% |
| 4934558 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.83 | 70.0 | 4.18e-01 | 94.4% | 15.0% |
| 5039712 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.82 | 56.0 | 3.97e-01 | 73.2% | 25.0% |
| 4976072 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.82 | 63.0 | 3.95e-01 | 84.5% | 16.6% |
| 5011452 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.82 | 62.0 | 3.85e-01 | 78.9% | 16.7% |
| 5044474 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.82 | 60.0 | 3.71e-01 | 83.1% | 14.7% |
| 5031171 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.81 | 62.0 | 4.11e-01 | 83.1% | 21.9% |
| 5042552 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.81 | 61.0 | 3.77e-01 | 78.9% | 15.9% |
| 5071671 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.81 | 63.0 | 3.95e-01 | 83.1% | 19.0% |
| 4928296 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.81 | 66.0 | 4.01e-01 | 87.3% | 15.0% |
| 4970544 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.80 | 62.0 | 3.78e-01 | 94.4% | 14.5% |
| 4982833 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.80 | 61.0 | 3.79e-01 | 80.3% | 16.1% |
| 5076679 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.80 | 67.0 | 4.08e-01 | 94.4% | 15.6% |
| 5042211 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.80 | 65.0 | 4.26e-01 | 100.0% | 21.8% |
| 5073280 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.80 | 64.0 | 3.89e-01 | 94.4% | 14.7% |
| 4974838 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.79 | 64.0 | 4.32e-01 | 94.4% | 25.4% |
| 4964433 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.79 | 62.0 | 3.83e-01 | 94.4% | 15.6% |
| 4979441 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.79 | 62.0 | 3.84e-01 | 90.1% | 16.0% |
| 5001587 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.78 | 70.0 | 4.29e-01 | 100.0% | 17.5% |
| 5011663 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.78 | 60.0 | 3.83e-01 | 83.1% | 20.0% |
| 5052076 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.78 | 60.0 | 3.65e-01 | 84.5% | 14.5% |
| 5043828 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.77 | 60.0 | 3.65e-01 | 83.1% | 15.1% |
| 4944701 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.77 | 61.0 | 3.83e-01 | 85.9% | 17.5% |
| 5073877 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.76 | 62.0 | 3.78e-01 | 94.4% | 15.1% |
| 4943370 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 61.0 | 3.75e-01 | 100.0% | 15.2% |
| 4955355 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 63.0 | 4.44e-01 | 91.5% | 31.4% |
| 4955902 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.74 | 60.0 | 3.78e-01 | 98.6% | 17.2% |
| 5073577 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.72 | 64.0 | 3.97e-01 | 100.0% | 17.5% |
| 4934638 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.70 | 59.0 | 3.74e-01 | 93.0% | 18.4% |
| 3267918 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 29.0 | 3.22e-01 | 84.5% | 58.2% |
| 3404915 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.57 | 31.0 | 1.99e-01 | 78.9% | 9.9% |
| 3272245 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.56 | 43.0 | 2.98e-01 | 97.2% | 22.2% |
| 3340494 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.53 | 43.0 | 3.38e-01 | 91.5% | 65.0% |
| 4484289 | 633.23.1.9 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 | 0.51 | 35.0 | 2.65e-01 | 71.8% | 97.4% |
| 3803542 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.50 | 40.0 | 3.24e-01 | 87.3% | 85.0% |