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IMGVR_UViG_3300001346_000109-3300001346-JGI20151J14362_1000122012
Arc-VirIMGVR_UViG_3300001346_000109-3300001346-JGI20151J14362_1000122012
Identity
- Kingdom:
- archaea
Quality
81.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-61
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gviA03 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.78 | 49.0 | 5.85e-01 | 83.0% | 100.0% |
| 3goxA02 | 3.30.60.130 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.77 | 64.0 | 6.40e-01 | 92.5% | 87.0% |
| 1wevA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.66 | 54.0 | 5.05e-01 | 92.5% | 73.4% |
| 5tdrA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 44.0 | 4.12e-01 | 83.0% | 55.7% |
| 2m3lA00 | 3.30.240.40 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › E6 early regulatory protein | 0.58 | 48.0 | 4.36e-01 | 96.2% | 75.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3591953 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.74 | 47.0 | 5.61e-01 | 81.1% | 100.0% |
| 3636674 | 376.1.1.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ | 0.73 | 50.0 | 5.25e-01 | 84.9% | 77.6% |
| 5067930 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.70 | 51.0 | 4.43e-01 | 90.6% | 51.2% |
| 3482217 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.66 | 53.0 | 5.11e-01 | 86.8% | 80.0% |
| 3230855 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.66 | 52.0 | 3.87e-01 | 88.7% | 36.2% |
| 3211002 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 56.0 | 5.06e-01 | 96.2% | 87.1% |
| 3711261 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 49.0 | 4.83e-01 | 90.6% | 81.8% |
| 4966035 | 376.1.3.98 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › DUF7562 | 0.60 | 49.0 | 4.73e-01 | 88.7% | 80.0% |
| 3578684 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.60 | 50.0 | 4.67e-01 | 96.2% | 75.4% |
| 3939195 | 376.1.3.55 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PF27108 | 0.59 | 48.0 | 4.50e-01 | 92.5% | 78.5% |
| 3905475 | 376.1.1.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ | 0.58 | 45.0 | 4.49e-01 | 84.9% | 80.0% |
| 4669194 | 377.4.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like › RRG8 | 0.58 | 49.0 | 3.46e-01 | 98.1% | 36.1% |
| 3691500 | 376.1.1.19 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RINGv | 0.58 | 44.0 | 4.26e-01 | 90.6% | 73.3% |
| 4199319 | 377.4.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like › RRG8 | 0.58 | 48.0 | 4.48e-01 | 92.5% | 100.0% |
| 4605147 | 377.4.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like › RRG8 | 0.58 | 49.0 | 3.41e-01 | 98.1% | 36.4% |
| 3430914 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 44.0 | 4.19e-01 | 92.5% | 69.2% |
| 4304232 | 377.4.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like › RRG8 | 0.56 | 47.0 | 3.28e-01 | 98.1% | 36.8% |
| 3199487 | 377.4.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like | 0.55 | 47.0 | 4.41e-01 | 98.1% | 96.9% |
| 3550019 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.53 | 37.0 | 2.03e-01 | 77.4% | 4.4% |