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IMGVR_UViG_3300001353_001162-3300001353-JGI20159J14440_100053485
Arc-VirIMGVR_UViG_3300001353_001162-3300001353-JGI20159J14440_100053485
Identity
- Kingdom:
- archaea
Quality
70.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-61
Domain cluster:
representative
D2
medium
residues 62-118
Domain cluster:
rep: IMGVR_UViG_2905020656_000002-2905020656-2905023021__D68-141
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5zliA01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.70 | 53.0 | 4.41e-01 | 84.2% | 73.6% |
| 2bw2A01 | 3.10.20.420 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain | 0.69 | 53.0 | 5.39e-01 | 82.5% | 96.4% |
| 1hezE00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.68 | 52.0 | 5.10e-01 | 82.5% | 96.7% |
| 3ng0A01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.66 | 57.0 | 4.74e-01 | 98.2% | 82.5% |
| 4lniJ01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.66 | 56.0 | 4.64e-01 | 98.2% | 81.7% |
| 1krhA01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.65 | 50.0 | 4.13e-01 | 84.2% | 92.2% |
| 1vc9A01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.64 | 51.0 | 4.06e-01 | 89.5% | 70.5% |
| 1wj4A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.63 | 48.0 | 4.27e-01 | 82.5% | 90.4% |
| 1r94A00 | 2.60.300.12 | Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain | 0.62 | 46.0 | 3.89e-01 | 80.7% | 48.5% |
| 4nfwF00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.62 | 54.0 | 3.99e-01 | 100.0% | 88.2% |
| 1wghA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.62 | 46.0 | 4.14e-01 | 82.5% | 97.6% |
| 2wyqA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 47.0 | 4.30e-01 | 84.2% | 97.4% |
| 4hppA01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.60 | 48.0 | 4.16e-01 | 94.7% | 94.1% |
| 1sjyA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.60 | 46.0 | 3.38e-01 | 82.5% | 55.2% |
| 4mpoB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.60 | 48.0 | 3.69e-01 | 93.0% | 66.2% |
| 7pyvC02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 44.0 | 4.16e-01 | 80.7% | 100.0% |
| 4m0wA01 | 3.10.20.540 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Papain-like viral protease, N-terminal domain | 0.59 | 45.0 | 4.53e-01 | 82.5% | 98.2% |
| 6jl3A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 45.0 | 4.18e-01 | 84.2% | 97.3% |
| 7k7yG02 | 1.20.1120.10 | Mainly Alpha › Up-down Bundle › "Clostridium botulinum neurotoxin B, ""coiled-coil"" domain" › "Clostridium botulinum neurotoxin b, ""coiled-coil"" domain" | 0.59 | 49.0 | 2.97e-01 | 93.0% | 44.0% |
| 5e6pA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 44.0 | 3.68e-01 | 84.2% | 89.5% |
| 1wiaA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 43.0 | 4.09e-01 | 82.5% | 98.6% |
| 3vqiD03 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 50.0 | 4.58e-01 | 98.2% | 100.0% |
| 4v19400 | 6.20.130.20 | Special › Other non-globular › Ribosomal Protein L25; Chain P › Mitochondrial ribosomal protein L55 | 0.58 | 33.0 | 3.58e-01 | 82.5% | 62.2% |
| 2kvzA00 | 3.10.20.320 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Putative peptidoglycan bound protein (lpxtg motif) | 0.57 | 43.0 | 3.84e-01 | 82.5% | 74.1% |
| 2mqjA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 42.0 | 3.92e-01 | 82.5% | 94.8% |
| 1z2mA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 43.0 | 3.97e-01 | 84.2% | 93.5% |
| 4kkiA02 | 2.170.130.30 | Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › | 0.57 | 42.0 | 3.56e-01 | 82.5% | 93.3% |
| 2cr5A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 50.0 | 4.46e-01 | 98.2% | 96.2% |
| 2mx2A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 43.0 | 3.86e-01 | 84.2% | 95.1% |
| 1ttnA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 42.0 | 3.90e-01 | 84.2% | 97.3% |
| 4dbgA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 47.0 | 4.21e-01 | 98.2% | 93.9% |
| 2j58A01 | 3.10.560.10 | Alpha Beta › Roll › Outer membrane lipoprotein wza fold like › Outer membrane lipoprotein wza domain like | 0.55 | 41.0 | 3.36e-01 | 82.5% | 82.6% |
| 3pvlA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 41.0 | 3.53e-01 | 84.2% | 95.8% |
| 7w0kA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 45.0 | 3.14e-01 | 93.0% | 40.7% |
| 1cjxA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 39.0 | 2.99e-01 | 80.7% | 88.7% |
| 2jmkA00 | 3.30.420.600 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Thermoplasma acidophilum protein TA0956 | 0.53 | 48.0 | 3.82e-01 | 100.0% | 88.2% |
| 3tssA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 41.0 | 3.86e-01 | 86.0% | 70.4% |
| 3r7wA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 3.06e-01 | 93.0% | 59.9% |
| 2al3A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 43.0 | 4.00e-01 | 94.7% | 98.7% |
| 3goeA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 44.0 | 4.00e-01 | 98.2% | 91.3% |
| 1qmeA01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.50 | 36.0 | 3.23e-01 | 82.5% | 83.3% |
| 1wgrA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 43.0 | 3.85e-01 | 96.5% | 100.0% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3702709 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.73 | 55.0 | 4.75e-01 | 82.5% | 95.6% |
| 3273388 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.72 | 53.0 | 4.98e-01 | 78.9% | 100.0% |
| 4030986 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.71 | 41.0 | 4.76e-01 | 87.7% | 82.5% |
| 3605551 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.69 | 53.0 | 4.54e-01 | 82.5% | 95.6% |
| 5022325 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.69 | 53.0 | 4.40e-01 | 82.5% | 72.0% |
| 3895653 | 221.1.1.50 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF4430 | 0.68 | 52.0 | 4.25e-01 | 82.5% | 95.1% |
| 4169587 | 239.1.1.2 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_S6e | 0.67 | 54.0 | 4.13e-01 | 87.7% | 92.3% |
| 5055825 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.67 | 51.0 | 4.10e-01 | 82.5% | 83.6% |
| 4995058 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.67 | 58.0 | 5.17e-01 | 96.5% | 98.8% |
| 4476706 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.67 | 53.0 | 4.60e-01 | 91.2% | 81.1% |
| 5019878 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.67 | 50.0 | 3.97e-01 | 82.5% | 96.7% |
| 4967823 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.66 | 50.0 | 4.62e-01 | 82.5% | 94.7% |
| 3921329 | 221.1.1.36 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N | 0.66 | 51.0 | 4.57e-01 | 84.2% | 83.7% |
| 3322134 | 221.1.1.44 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD | 0.66 | 50.0 | 4.48e-01 | 82.5% | 96.2% |
| 4025793 | 80.1.1.1 ↗ | beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn | 0.66 | 50.0 | 3.89e-01 | 82.5% | 42.3% |
| 3953512 | 221.1.1.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Fer2 | 0.66 | 50.0 | 4.22e-01 | 82.5% | 94.7% |
| 4941937 | 221.1.1.50 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF4430 | 0.65 | 49.0 | 4.15e-01 | 82.5% | 98.9% |
| 4947785 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.64 | 53.0 | 5.00e-01 | 91.2% | 88.4% |
| 4994326 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.64 | 56.0 | 4.76e-01 | 98.2% | 90.5% |
| 3768786 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 50.0 | 4.44e-01 | 84.2% | 95.0% |
| 5028192 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.64 | 51.0 | 4.81e-01 | 86.0% | 82.4% |
| 3462989 | 80.1.1.1 ↗ | beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn | 0.64 | 46.0 | 4.30e-01 | 78.9% | 62.9% |
| 3412042 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.63 | 49.0 | 4.18e-01 | 84.2% | 78.9% |
| 3639666 | 221.1.1.184 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF7357 | 0.62 | 47.0 | 4.10e-01 | 82.5% | 80.7% |
| 3995601 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.62 | 48.0 | 4.28e-01 | 84.2% | 93.8% |
| 3355348 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 47.0 | 4.08e-01 | 84.2% | 93.3% |
| 3453249 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 47.0 | 4.28e-01 | 82.5% | 96.0% |
| 3394851 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.61 | 47.0 | 4.13e-01 | 84.2% | 82.4% |
| 3626551 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 46.0 | 4.33e-01 | 82.5% | 94.3% |
| 3580555 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.61 | 48.0 | 4.04e-01 | 86.0% | 93.7% |
| 3258833 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 46.0 | 3.89e-01 | 82.5% | 90.5% |
| 6238 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.60 | 46.0 | 3.38e-01 | 82.5% | 55.2% |
| 3398580 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 46.0 | 4.11e-01 | 82.5% | 96.2% |
| 4028615 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.60 | 46.0 | 4.23e-01 | 84.2% | 96.0% |
| 3790747 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 46.0 | 3.62e-01 | 84.2% | 70.0% |
| 5040460 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.58 | 45.0 | 4.19e-01 | 86.0% | 75.7% |
| 3597643 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 50.0 | 3.98e-01 | 98.2% | 67.0% |
| 5067306 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.57 | 49.0 | 3.09e-01 | 94.7% | 79.6% |
| 3547433 | 221.1.1.36 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N | 0.57 | 49.0 | 4.16e-01 | 98.2% | 97.9% |
| 4059008 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.56 | 47.0 | 4.54e-01 | 98.2% | 83.1% |
| 4648775 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.55 | 43.0 | 4.33e-01 | 86.0% | 87.9% |
| None | — | 0.55 | 36.0 | 2.03e-01 | 70.2% | 4.9% | |
| 3177935 | 221.1.1.44 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD | 0.55 | 47.0 | 4.37e-01 | 98.2% | 97.3% |
| 3741078 | 221.1.1.44 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD | 0.54 | 47.0 | 4.32e-01 | 98.2% | 97.3% |
| 5009635 | 3534.1.1.5 ↗ | beta barrels › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › DUF1854 | 0.54 | 42.0 | 3.82e-01 | 84.2% | 85.3% |
| 3936497 | 221.1.1.88 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › CLU_N | 0.53 | 45.0 | 4.20e-01 | 98.2% | 98.7% |
| 4573456 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.53 | 41.0 | 4.12e-01 | 86.0% | 84.5% |
| 3184129 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.52 | 43.0 | 4.12e-01 | 98.2% | 87.1% |
| 3716865 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 45.0 | 4.05e-01 | 98.2% | 97.5% |
| 3893439 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 43.0 | 2.35e-01 | 96.5% | 7.0% |
| 3527278 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 40.0 | 2.56e-01 | 93.0% | 22.2% |