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IMGVR_UViG_3300001355_000506-3300001355-JGI20158J14315_100063441

Arc-Vir

IMGVR_UViG_3300001355_000506-3300001355-JGI20158J14315_100063441

Quality

70.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 139-224
PDB
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rhfA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 54.0 5.31e-01 95.3% 91.2%
1loxA02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.63 50.0 4.71e-01 90.7% 79.3%
3nsjA02 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.62 54.0 4.80e-01 100.0% 90.6%
5h9fJ00 3.30.70.2660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 50.0 3.82e-01 90.7% 74.0%
3w57A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.62 53.0 4.89e-01 96.5% 100.0%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 48.0 4.78e-01 88.4% 83.0%
1opoA02 2.60.40.1780 Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein 0.61 46.0 4.41e-01 90.7% 68.9%
3kwuA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.61 51.0 4.49e-01 96.5% 98.5%
2x9zA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 50.0 4.29e-01 95.3% 65.8%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 51.0 4.34e-01 95.3% 61.9%
1bu8A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.60 48.0 4.59e-01 90.7% 79.2%
2wnvD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 51.0 4.51e-01 97.7% 68.4%
4b96A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.60 49.0 4.19e-01 93.0% 71.5%
1o91A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 51.0 4.50e-01 97.7% 67.9%
7mjrA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 49.0 4.36e-01 94.2% 67.9%
3k4zA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 50.0 4.12e-01 94.2% 58.0%
3bn6A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 49.0 4.12e-01 94.2% 58.9%
4zxeC00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 49.0 4.23e-01 91.9% 59.6%
1f0lA03 2.60.40.700 Mainly Beta › Sandwich › Immunoglobulin-like › Diphtheria toxin, receptor-binding domain 0.59 48.0 4.08e-01 93.0% 59.1%
2wnoA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.59 49.0 4.55e-01 95.3% 72.6%
4d8mA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 48.0 3.98e-01 94.2% 52.9%
3isrA02 2.60.40.2250 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 49.0 4.74e-01 97.7% 100.0%
3bwsA01 2.60.40.3070 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 44.0 4.47e-01 87.2% 85.7%
3oz2A02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.57 46.0 3.84e-01 90.7% 55.6%
2qqkA02 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.57 44.0 4.10e-01 100.0% 66.1%
3wnoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 46.0 4.44e-01 93.0% 87.0%
2zxqA05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 47.0 3.70e-01 95.3% 92.9%
1acxA00 2.60.40.230 Mainly Beta › Sandwich › Immunoglobulin-like › Neocarzinostatin-like 0.56 45.0 4.23e-01 90.7% 88.9%
2wmpB00 2.60.40.1090 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain 0.56 40.0 3.66e-01 77.9% 82.9%
3a21A03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 45.0 4.34e-01 100.0% 79.2%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.49e-01 97.7% 46.9%
1pkhB00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.55 40.0 3.35e-01 80.2% 49.7%
4ypjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 4.09e-01 91.9% 84.0%
2pn5A06 2.20.130.20 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › 0.55 45.0 4.41e-01 91.9% 86.2%
2c9aA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.87e-01 97.7% 55.6%
2g9gA00 2.60.120.1020 Mainly Beta › Sandwich › Jelly Rolls › PAW domain 0.55 41.0 3.27e-01 81.4% 64.6%
3gbwA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.54 44.0 3.73e-01 95.3% 80.1%
3mcaA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 43.0 4.15e-01 94.2% 100.0%
3abzA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 43.0 3.58e-01 93.0% 52.7%
2qycA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 43.0 4.14e-01 94.2% 97.1%
2ftrA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 44.0 4.19e-01 95.3% 99.0%
3lb9A00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.53 41.0 3.29e-01 91.9% 40.7%
3ihgA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.51 40.0 3.49e-01 88.4% 63.4%
7zgmA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 36.0 2.78e-01 77.9% 49.2%
3qjlA02 3.30.70.1900 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 41.0 3.80e-01 95.3% 100.0%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2859191 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.63 52.0 4.12e-01 93.0% 52.9%
3276320 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.63 55.0 4.85e-01 100.0% 98.5%
3918381 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.63 51.0 4.88e-01 93.0% 83.8%
5040271 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 52.0 4.48e-01 95.3% 64.3%
5083152 304.158.1.2 a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d 0.61 48.0 3.74e-01 88.4% 76.7%
3875205 4081.1.1.10 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Gpi16 0.61 51.0 4.10e-01 97.7% 53.2%
3776151 11.1.5.94 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Gpi16 0.61 51.0 4.22e-01 96.5% 61.2%
5041349 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 49.0 4.71e-01 89.5% 82.0%
4477417 10.32.1.208 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Cleaved_Adhesin 0.60 52.0 4.15e-01 100.0% 98.9%
4002360 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.60 51.0 3.86e-01 100.0% 86.7%
5068878 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.60 51.0 3.79e-01 96.5% 78.7%
3898330 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.60 51.0 4.83e-01 97.7% 80.0%
3250212 11.1.5.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.60 50.0 4.39e-01 95.3% 77.8%
3645446 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.60 51.0 4.41e-01 100.0% 84.8%
3285404 10.20.1.2 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N 0.59 51.0 4.74e-01 96.5% 79.1%
3961820 10.20.1.2 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N 0.59 49.0 4.54e-01 95.3% 71.8%
5032460 10.1.2.180 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › EMP24_GP25L 0.59 48.0 4.99e-01 100.0% 100.0%
1810618 10.32.1.2 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.59 48.0 4.27e-01 91.9% 63.4%
4027276 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.59 48.0 4.08e-01 95.3% 96.9%
5068043 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 50.0 4.78e-01 98.8% 89.5%
3255936 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 50.0 4.77e-01 98.8% 86.7%
3268653 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 50.0 4.65e-01 97.7% 78.2%
3598607 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.58 44.0 4.72e-01 89.5% 100.0%
5063671 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 46.0 4.53e-01 88.4% 90.3%
5028478 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 47.0 4.55e-01 91.9% 85.0%
4942867 11.4.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) 0.58 44.0 3.73e-01 82.6% 80.7%
5082838 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 42.0 4.33e-01 77.9% 83.7%
3489254 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.58 48.0 3.91e-01 97.7% 71.4%
3298052 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 42.0 3.93e-01 77.9% 90.9%
3974305 10.20.1.2 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N 0.58 49.0 4.46e-01 96.5% 80.0%
3269734 11.1.5.62 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM49 0.57 40.0 3.67e-01 74.4% 91.7%
4326586 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 47.0 4.36e-01 96.5% 70.8%
3520278 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 49.0 4.02e-01 100.0% 72.0%
3603556 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.57 47.0 4.23e-01 95.3% 66.9%
3281166 10.20.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.57 49.0 4.50e-01 98.8% 90.4%
4486481 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.57 47.0 4.56e-01 97.7% 82.0%
3277196 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.57 48.0 4.87e-01 98.8% 100.0%
4566368 11.1.5.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Sec23_BS 0.57 48.0 4.16e-01 97.7% 81.4%
3728592 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.25e-01 100.0% 63.0%
3894462 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.56 46.0 3.89e-01 95.3% 58.1%
4028719 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.56 45.0 3.95e-01 93.0% 100.0%
5027268 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 48.0 4.06e-01 100.0% 58.1%
3894334 11.1.1.134 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL12p40_C 0.56 44.0 4.24e-01 89.5% 80.0%
3277023 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.25e-01 98.8% 70.0%
3902273 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 41.0 3.82e-01 80.2% 74.8%
5035236 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 4.31e-01 90.7% 91.0%
2061789 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 41.0 4.39e-01 90.7% 100.0%
5038908 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 40.0 3.80e-01 80.2% 80.9%
4030535 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 4.13e-01 96.5% 83.2%
3277295 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 46.0 4.42e-01 97.7% 88.0%
3263951 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 44.0 4.47e-01 90.7% 94.1%
5039023 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.54 44.0 4.14e-01 94.2% 84.5%
3478158 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 44.0 4.01e-01 95.3% 73.6%
5021015 11.1.1.130 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Inhibitor_I42 0.53 42.0 4.32e-01 88.4% 100.0%
4950100 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 38.0 3.67e-01 76.7% 83.0%
3884004 11.1.1.1016 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30511 0.53 44.0 4.17e-01 95.3% 87.6%
5052397 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 3.73e-01 96.5% 83.9%
5020442 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.53 42.0 4.12e-01 90.7% 100.0%
5001959 11.1.1.75 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › He_PIG 0.53 44.0 4.36e-01 98.8% 91.6%
5021830 11.1.1.130 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Inhibitor_I42 0.53 43.0 4.13e-01 95.3% 85.7%
5060187 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 37.0 3.57e-01 74.4% 78.0%
3640471 1.1.8.2 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C 0.52 42.0 3.70e-01 91.9% 74.8%
3957104 11.13.1.3 beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › MspA 0.52 40.0 3.25e-01 87.2% 79.5%
3407712 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.52 43.0 4.23e-01 100.0% 96.9%
3273082 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 40.0 3.99e-01 90.7% 81.1%
3995627 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 37.0 3.81e-01 79.1% 82.4%
3742317 1.1.8.2 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C 0.51 41.0 3.57e-01 93.0% 72.7%
D2 medium residues 1-71_104-132
PDB