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IMGVR_UViG_3300001355_000506-3300001355-JGI20158J14315_1000634412
Arc-VirIMGVR_UViG_3300001355_000506-3300001355-JGI20158J14315_1000634412
Identity
- Kingdom:
- archaea
Quality
92.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 139-152_385-427
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bhqA00 | 3.30.70.2830 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 38.0 | 3.12e-01 | 71.9% | 50.5% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.55 | 38.0 | 3.23e-01 | 71.9% | 62.5% |
| 5xyiY00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 36.0 | 3.04e-01 | 70.2% | 40.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4505220 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.54 | 37.0 | 3.16e-01 | 73.7% | 56.0% |
| 3272379 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.52 | 36.0 | 3.22e-01 | 73.7% | 69.7% |
| None | — | 0.52 | 35.0 | 2.05e-01 | 71.9% | 15.8% | |
| 3676540 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.51 | 37.0 | 3.15e-01 | 78.9% | 70.0% |
D2
high
residues 160-228_334-379
Domain cluster:
rep: LacPavin_0818_WC55_scaffold_2946_prodigal-single.1__X__X__00342__D546-615_752-773
D3
high
residues 233-327
Domain cluster:
rep: IMGVR_UViG_3300044580_000147-3300044580-Ga0485776_0002898_8584_9516__D106-198
D4
medium
residues 2-131
Domain cluster:
rep: IMGVR_UViG_3300001947_000023-3300001947-GOS2218_10417241__D2-131