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IMGVR_UViG_3300001446_000038-3300001446-JGI20130J15133_101019311
Arc-VirIMGVR_UViG_3300001446_000038-3300001446-JGI20130J15133_101019311
Identity
- Kingdom:
- archaea
Quality
79.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-44
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2drpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.88 | 63.0 | 6.50e-01 | 75.7% | 85.3% |
| 2rsiA02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.87 | 61.0 | 6.59e-01 | 75.7% | 96.6% |
| 2lvhA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.87 | 75.0 | 7.10e-01 | 100.0% | 91.1% |
| 5vmzA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.83 | 58.0 | 5.77e-01 | 78.4% | 71.8% |
| 2ctdA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.76 | 52.0 | 3.94e-01 | 75.7% | 29.2% |
| 2lxwA00 | 6.10.250.1730 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.66 | 44.0 | 4.01e-01 | 78.4% | 47.3% |
| 2xrcA02 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.64 | 50.0 | 4.70e-01 | 100.0% | 70.8% |
| 3mhsC02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.64 | 43.0 | 4.22e-01 | 73.0% | 96.3% |
| 5trbA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 48.0 | 4.12e-01 | 100.0% | 63.8% |
| 1xtpA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 39.0 | 2.49e-01 | 86.5% | 39.3% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3498001 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.98 | 80.0 | 7.38e-01 | 86.5% | 71.1% |
| 3800680 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.95 | 72.0 | 7.42e-01 | 83.8% | 85.7% |
| 3795744 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.94 | 69.0 | 6.16e-01 | 78.4% | 58.0% |
| 3484387 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.93 | 70.0 | 6.25e-01 | 81.1% | 60.0% |
| 3211850 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.92 | 71.0 | 5.79e-01 | 83.8% | 47.7% |
| 3411708 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.91 | 75.0 | 6.16e-01 | 91.9% | 52.3% |
| 3191682 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.91 | 70.0 | 7.21e-01 | 83.8% | 88.6% |
| 3935312 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.89 | 79.0 | 6.01e-01 | 100.0% | 45.0% |
| 3998575 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.89 | 72.0 | 5.17e-01 | 86.5% | 33.7% |
| 3399453 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.89 | 79.0 | 6.25e-01 | 97.3% | 57.1% |
| 3837429 | 109.4.1.585 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF627 | 0.89 | 75.0 | 4.41e-01 | 94.6% | 40.8% |
| 3625564 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.88 | 70.0 | 6.82e-01 | 86.5% | 80.0% |
| 3403245 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.88 | 69.0 | 5.21e-01 | 86.5% | 37.6% |
| 3626544 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.87 | 68.0 | 6.39e-01 | 83.8% | 70.5% |
| 3389490 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.86 | 73.0 | 5.96e-01 | 94.6% | 52.3% |
| 3932469 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.86 | 76.0 | 5.75e-01 | 100.0% | 45.9% |
| 3495019 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.86 | 61.0 | 4.66e-01 | 78.4% | 35.0% |
| 3542259 | 386.1.1.390 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_5, zf-C2H2_11 | 0.86 | 75.0 | 4.68e-01 | 100.0% | 23.3% |
| 3401528 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.85 | 63.0 | 4.60e-01 | 83.8% | 32.2% |
| 3746790 | 386.1.1.25 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-H2C2_5 | 0.85 | 75.0 | 6.39e-01 | 100.0% | 75.0% |
| 3627003 | 386.1.1.238 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 | 0.85 | 60.0 | 4.81e-01 | 78.4% | 40.0% |
| 3213949 | 386.1.1.306 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29652 | 0.85 | 69.0 | 5.98e-01 | 89.2% | 74.5% |
| 3566372 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.84 | 60.0 | 4.50e-01 | 78.4% | 32.9% |
| 3687321 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.84 | 70.0 | 6.84e-01 | 94.6% | 97.5% |
| 3216198 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.83 | 74.0 | 5.48e-01 | 100.0% | 41.1% |
| 3630611 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.83 | 72.0 | 5.63e-01 | 100.0% | 46.3% |
| 3398039 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.83 | 75.0 | 6.99e-01 | 100.0% | 95.6% |
| 3921390 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.83 | 74.0 | 5.25e-01 | 100.0% | 46.7% |
| 3406637 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.83 | 70.0 | 6.51e-01 | 91.9% | 75.6% |
| 3926940 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.83 | 73.0 | 5.55e-01 | 100.0% | 43.5% |
| 3254528 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.83 | 72.0 | 5.54e-01 | 97.3% | 51.2% |
| None | — | 0.83 | 58.0 | 5.10e-01 | 78.4% | 50.9% | |
| 3545107 | 386.1.1.126 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_7th_ZNF462 | 0.82 | 73.0 | 6.88e-01 | 100.0% | 95.6% |
| 3627119 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.81 | 71.0 | 5.46e-01 | 100.0% | 45.0% |
| 3752890 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.81 | 57.0 | 5.36e-01 | 78.4% | 62.2% |
| 3623527 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.78 | 69.0 | 5.57e-01 | 100.0% | 60.0% |
| 3936248 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.78 | 69.0 | 5.06e-01 | 100.0% | 44.2% |
| 3993590 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.78 | 67.0 | 4.53e-01 | 100.0% | 30.0% |
| 3414370 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.77 | 55.0 | 5.42e-01 | 78.4% | 75.0% |
| 4331241 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.76 | 56.0 | 5.14e-01 | 81.1% | 60.0% |