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IMGVR_UViG_3300001480_000052-3300001480-rank13_1001986620

Arc-Vir

IMGVR_UViG_3300001480_000052-3300001480-rank13_1001986620

Quality

83.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-111
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13353.12 best Fer4_12 25.5 2.10e-05 79.3% 51.1%
PF04055.28 Radical_SAM 42.3 1.20e-10 75.7% 48.8%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c8fA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.83 75.0 5.63e-01 99.1% 43.3%
4njhA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.81 76.0 5.94e-01 97.3% 56.0%
3ciwA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.76 58.0 4.03e-01 81.1% 25.6%
6xigA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.72 54.0 3.89e-01 82.0% 29.0%
3ibsA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.63 48.0 3.94e-01 80.2% 66.0%
1ig3A02 3.40.50.10240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain 0.62 50.0 4.53e-01 84.7% 100.0%
3vtiA06 3.30.420.560 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.61 53.0 5.45e-01 93.7% 97.1%
3bh1A01 3.10.630.10 Alpha Beta › Roll › dip2346 fold like › dip2346 domain like 0.59 47.0 3.76e-01 87.4% 92.9%
1u04A03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 48.0 4.05e-01 86.5% 66.3%
2e7yB00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.58 47.0 3.56e-01 87.4% 98.9%
2w0mA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 47.0 3.74e-01 87.4% 57.3%
1qrsA05 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.58 37.0 3.65e-01 80.2% 59.3%
3rssA02 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.58 45.0 3.32e-01 82.0% 44.2%
3lupA01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 43.0 3.90e-01 80.2% 76.1%
3ke3A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.57 47.0 3.51e-01 86.5% 44.0%
3x2xA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.57 46.0 3.70e-01 87.4% 97.4%
1cr2A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 46.0 3.61e-01 87.4% 56.9%
2gfqA02 3.40.50.10700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like 0.57 42.0 4.67e-01 80.2% 100.0%
3bzcA03 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.56 41.0 3.99e-01 97.3% 67.2%
2hisA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.56 46.0 3.25e-01 86.5% 62.8%
7b7pA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.55 46.0 3.50e-01 90.1% 92.8%
1gkpA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.55 42.0 2.95e-01 96.4% 25.1%
3vovA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 42.0 3.72e-01 80.2% 100.0%
2o1sB03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 43.0 4.12e-01 97.3% 73.2%
6hcdD00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 41.0 3.88e-01 79.3% 93.3%
7r7jA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 44.0 3.75e-01 87.4% 74.7%
5ay7B00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 44.0 3.16e-01 87.4% 66.3%
6i3mE02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.54 43.0 3.61e-01 86.5% 61.5%
7xrjA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 40.0 4.03e-01 78.4% 80.9%
3h5dA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 43.0 3.10e-01 84.7% 45.6%
4d8lA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.54 42.0 3.14e-01 84.7% 75.5%
3o3mD03 3.40.50.11900 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 47.0 4.29e-01 96.4% 80.1%
2dt8A01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 40.0 3.65e-01 79.3% 77.2%
6jl7A01 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.53 43.0 3.98e-01 87.4% 80.6%
3kznA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.53 42.0 3.70e-01 84.7% 78.3%
2g7zA01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 41.0 3.69e-01 82.9% 76.8%
3graA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.52 43.0 3.65e-01 90.1% 67.0%
3l50A00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.52 34.0 3.22e-01 92.8% 55.1%
1ivnA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.52 43.0 3.67e-01 90.1% 78.7%
1udxA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 44.0 3.79e-01 93.7% 82.2%
4bxoA01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 42.0 3.95e-01 93.7% 73.3%
3f5dA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.50 41.0 3.43e-01 91.0% 50.8%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4549416 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.95 83.0 6.54e-01 98.2% 49.0%
3965152 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.94 80.0 6.31e-01 98.2% 48.5%
5024568 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.94 79.0 6.18e-01 96.4% 46.4%
4313457 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.93 81.0 6.19e-01 96.4% 45.0%
4932050 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.93 77.0 6.10e-01 98.2% 46.8%
4303997 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.92 83.0 6.26e-01 99.1% 44.8%
4458545 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.92 80.0 6.15e-01 98.2% 45.5%
5010295 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.92 79.0 6.18e-01 98.2% 47.1%
4279772 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.92 79.0 5.95e-01 95.5% 42.1%
4599886 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.91 81.0 6.27e-01 98.2% 46.8%
4936106 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.90 82.0 6.29e-01 100.0% 47.7%
4970204 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.90 81.0 6.11e-01 98.2% 44.8%
4277885 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.90 81.0 6.27e-01 100.0% 47.5%
None 0.90 80.0 6.23e-01 97.3% 48.6%
1954222 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.89 83.0 6.20e-01 98.2% 44.8%
4279469 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.89 80.0 6.26e-01 100.0% 50.0%
5023330 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.88 84.0 6.24e-01 98.2% 51.2%
4098501 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.88 83.0 6.19e-01 100.0% 44.5%
5055301 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.88 78.0 5.91e-01 98.2% 43.8%
5047699 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.87 74.0 5.65e-01 96.4% 42.6%
3977266 2002.1.1.232 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 0.87 82.0 6.31e-01 98.2% 54.5%
4337349 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.87 82.0 6.30e-01 98.2% 54.8%
4929229 2002.1.1.232 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 0.87 76.0 5.81e-01 95.5% 44.3%
5001299 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.87 76.0 5.69e-01 96.4% 41.6%
5056316 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.86 61.0 4.10e-01 80.2% 22.5%
3838534 2002.1.1.232 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 0.86 80.0 6.01e-01 98.2% 51.4%
5024003 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.86 76.0 5.76e-01 100.0% 43.3%
2440205 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.86 82.0 6.29e-01 100.0% 55.1%
4156735 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.86 80.0 6.12e-01 100.0% 48.9%
5067065 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.85 80.0 5.93e-01 98.2% 49.4%
4995167 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.85 79.0 5.91e-01 97.3% 48.3%
4939708 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.84 76.0 5.70e-01 97.3% 42.9%
4971718 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.84 76.0 5.76e-01 100.0% 45.1%
3602602 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.84 77.0 5.71e-01 95.5% 46.9%
4990840 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.83 74.0 5.52e-01 100.0% 41.6%
4971612 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.83 76.0 5.47e-01 100.0% 38.2%
4554434 2002.1.1.232 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 0.82 78.0 6.02e-01 100.0% 49.8%
4970981 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.82 75.0 5.71e-01 100.0% 46.1%
4984856 2002.1.1.232 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 0.82 76.0 5.64e-01 96.4% 47.2%
4449629 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.81 76.0 5.94e-01 98.2% 56.2%
4612866 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.81 76.0 5.88e-01 98.2% 56.3%
5021167 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.80 72.0 5.38e-01 94.6% 44.1%
5043861 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.77 66.0 5.02e-01 97.3% 42.6%
5066795 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.77 63.0 4.86e-01 91.9% 42.2%
5001398 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.76 71.0 4.90e-01 100.0% 42.0%
4946453 247.1.1.12 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 0.60 49.0 3.91e-01 88.3% 99.5%
4945207 2010.1.1.1 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV 0.59 45.0 4.04e-01 80.2% 76.1%
4430167 2005.1.1.7 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.59 46.0 3.59e-01 83.8% 90.0%
None 0.59 46.0 3.43e-01 83.8% 91.2%
5058279 247.1.1.11 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.58 47.0 3.65e-01 87.4% 97.2%
3602085 247.1.1.30 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 0.58 47.0 3.43e-01 88.3% 95.9%
4160455 2002.1.1.96 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › S-methyl_trans 0.57 44.0 3.30e-01 94.6% 33.6%
1712134 327.5.1.2 a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.56 31.0 3.17e-01 98.2% 51.8%
None 0.56 45.0 3.34e-01 88.3% 97.7%
4341957 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.56 43.0 3.69e-01 82.0% 81.7%
4089853 247.1.1.31 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_4, Anti-Pycsar_Apyc1 0.56 45.0 3.30e-01 88.3% 95.9%
3660629 247.1.1.11 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.55 44.0 3.21e-01 87.4% 93.3%
4982215 247.1.1.11 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.55 44.0 3.46e-01 88.3% 96.9%
3955918 327.5.1.2 a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.54 32.0 3.21e-01 98.2% 57.3%
3442876 247.1.1.11 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.54 43.0 3.22e-01 87.4% 93.5%
4936346 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.54 46.0 3.83e-01 92.8% 83.2%
3943513 2484.1.1.74 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Tex_YqgF 0.53 42.0 3.84e-01 85.6% 64.0%
5073461 2007.1.3.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.52 43.0 4.22e-01 89.2% 89.2%
4046369 2003.4.1.1 a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP 0.52 35.0 2.87e-01 91.9% 38.0%
4997631 2003.1.1.123 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF166 0.52 46.0 4.21e-01 94.6% 81.4%
5021881 2003.1.1.123 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF166 0.51 45.0 3.74e-01 94.6% 68.9%
4809219 327.5.1.2 a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.50 28.0 3.18e-01 98.2% 73.7%
D2 medium residues 112-216
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mcnB02 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.72 65.0 4.98e-01 100.0% 81.1%
2aqwA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.71 61.0 4.39e-01 97.1% 41.4%
1bmtA02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.69 56.0 4.85e-01 85.7% 75.3%
1v77A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.69 63.0 5.04e-01 100.0% 67.3%
2dy3C02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.69 60.0 4.79e-01 96.2% 56.2%
2x5eA00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.67 59.0 4.59e-01 100.0% 83.8%
1yirA00 3.20.140.10 Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase 0.65 58.0 3.92e-01 99.0% 33.8%
1ii7B02 3.30.110.80 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › DNA double-strand break repair nuclease 0.65 47.0 5.17e-01 82.9% 96.4%
3hzhA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 52.0 4.81e-01 86.7% 85.1%
2l69A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 50.0 4.70e-01 85.7% 66.4%
7wdtA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 56.0 3.87e-01 100.0% 57.0%
3qy9B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 51.0 4.69e-01 85.7% 82.4%
2duwA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 52.0 4.78e-01 88.6% 91.2%
7e0mA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.64 44.0 3.98e-01 72.4% 58.8%
3crnA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 51.0 4.76e-01 85.7% 83.7%
1dz3A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 51.0 4.88e-01 89.5% 91.1%
3sqlA02 3.40.50.10870 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycosyl hydrolase family 3 0.62 50.0 4.46e-01 87.6% 81.0%
1d5wA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 50.0 4.82e-01 87.6% 87.0%
4zemA02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.62 48.0 4.15e-01 83.8% 86.9%
1npdB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 47.0 4.20e-01 81.9% 75.8%
4ymhD00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 49.0 3.77e-01 85.7% 70.5%
3eodA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 49.0 4.75e-01 86.7% 87.8%
1vq2A00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.60 49.0 4.22e-01 89.5% 76.3%
2o2gA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 53.0 4.26e-01 100.0% 89.8%
4hujA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 52.0 4.20e-01 96.2% 70.1%
3jynA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 48.0 4.32e-01 86.7% 90.4%
7zs9401 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.60 52.0 4.13e-01 98.1% 95.5%
3frhA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 45.0 3.79e-01 81.9% 58.5%
2cb9A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 52.0 4.46e-01 100.0% 89.1%
1qp8A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 49.0 4.10e-01 90.5% 77.3%
3zpgA02 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.59 53.0 4.19e-01 100.0% 68.1%
3ih5A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 48.0 3.89e-01 89.5% 97.1%
3gqvA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 49.0 4.08e-01 94.3% 78.4%
1z90B01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.58 49.0 3.46e-01 95.2% 78.9%
2ocgA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 49.0 3.80e-01 97.1% 93.7%
4hwgA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.57 49.0 4.00e-01 98.1% 86.9%
1yb1B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 50.0 3.94e-01 100.0% 85.1%
5ix8A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 44.0 3.91e-01 84.8% 72.3%
1c4kA01 3.40.50.220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 44.0 4.41e-01 90.5% 82.9%
3bdiA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 50.0 4.06e-01 100.0% 52.2%
5ej8A02 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.56 46.0 4.37e-01 89.5% 94.4%
7pvaB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 48.0 4.68e-01 94.3% 84.9%
3zq4A01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.56 49.0 3.66e-01 100.0% 59.6%
2ziuB01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 44.0 3.98e-01 88.6% 85.2%
1fuyB01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 49.0 4.25e-01 100.0% 72.0%
3h5tA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 43.0 3.98e-01 84.8% 81.2%
2kpoA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 43.0 4.23e-01 83.8% 85.5%
1eg2A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 47.0 3.59e-01 100.0% 64.1%
3fojA00 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.54 40.0 4.15e-01 90.5% 83.8%
3flhB00 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.53 42.0 4.05e-01 90.5% 73.6%
4ljkG00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 43.0 3.51e-01 89.5% 62.9%
5kiaA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 44.0 4.10e-01 91.4% 89.6%
1sqgA04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 46.0 3.76e-01 96.2% 58.6%
7zvjA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.53 43.0 3.27e-01 87.6% 69.5%
1zkpC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 45.0 3.50e-01 96.2% 48.6%
4ccsA02 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 40.0 3.82e-01 81.0% 77.9%
3slkA02 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.51 45.0 3.25e-01 100.0% 44.0%
3nhvC01 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.50 39.0 3.77e-01 89.5% 73.3%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3789632 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.73 65.0 4.75e-01 100.0% 63.4%
4554871 2002.1.1.28 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI 0.70 63.0 4.94e-01 100.0% 71.8%
4532780 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.69 62.0 4.95e-01 100.0% 65.7%
4638519 2002.1.1.236 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS 0.68 53.0 4.61e-01 83.8% 55.2%
4231676 2002.1.1.28 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI 0.68 61.0 4.72e-01 100.0% 58.8%
5062104 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.68 61.0 4.56e-01 100.0% 72.7%
3415335 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.67 53.0 4.71e-01 86.7% 71.6%
5041486 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.66 59.0 4.50e-01 100.0% 62.8%
3958257 2496.1.1.0 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.65 50.0 4.98e-01 81.9% 90.9%
3064019 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.65 58.0 4.84e-01 100.0% 76.1%
3459200 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.65 53.0 4.35e-01 90.5% 98.0%
5001085 7501.1.1.2 a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C 0.64 58.0 4.47e-01 100.0% 66.4%
3630555 207.1.1.79 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.64 57.0 4.07e-01 100.0% 35.9%
4207588 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.64 53.0 4.49e-01 90.5% 84.0%
4213665 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.64 52.0 4.69e-01 86.7% 73.6%
5053327 2007.3.1.3 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig 0.64 54.0 4.78e-01 93.3% 87.1%
5011959 2002.1.1.66 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I 0.64 52.0 4.16e-01 89.5% 63.7%
4012289 129.1.1.51 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › ADH_zinc_N 0.64 53.0 3.98e-01 90.5% 61.0%
144098 2003.1.1.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.63 48.0 4.87e-01 80.0% 100.0%
4546833 7579.1.1.29 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › UPF0227 0.63 49.0 4.13e-01 83.8% 93.9%
4016190 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.63 52.0 4.37e-01 89.5% 85.7%
4854396 2003.1.1.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N 0.62 50.0 4.34e-01 89.5% 81.3%
3960957 2003.1.1.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N 0.62 50.0 4.27e-01 87.6% 78.8%
3801885 2007.1.3.28 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Glyco_transf_61 0.61 50.0 4.18e-01 87.6% 78.3%
3388874 2007.9.1.1 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR 0.61 52.0 4.68e-01 93.3% 89.7%
4956541 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.61 35.0 3.94e-01 81.9% 72.5%
3912183 2003.1.1.11 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3Beta_HSD 0.61 54.0 3.73e-01 99.0% 92.2%
5026006 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.61 49.0 3.57e-01 89.5% 54.3%
5008275 2002.1.1.236 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS 0.61 44.0 4.10e-01 82.9% 58.6%
3660335 2007.2.1.8 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Glyco_transf_61 0.60 50.0 3.95e-01 90.5% 74.5%
3648474 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.60 47.0 4.05e-01 84.8% 68.8%
4958798 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.59 45.0 3.87e-01 81.0% 54.7%
3377933 7512.1.1.88 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_61 0.59 49.0 3.70e-01 90.5% 53.1%
3366139 2007.2.1.8 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Glyco_transf_61 0.59 49.0 3.92e-01 90.5% 65.2%
3179787 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.58 47.0 3.58e-01 88.6% 45.8%
3293573 2003.1.1.141 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Polysacc_synt_2, GDP_Man_Dehyd 0.58 51.0 3.64e-01 99.0% 90.4%
3668169 2003.1.1.285 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Glyco_transf_61 0.58 48.0 4.71e-01 90.5% 93.9%
3683578 7512.1.1.88 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_61 0.58 49.0 3.70e-01 92.4% 61.6%
2049376 2003.1.11.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.58 48.0 4.83e-01 90.5% 88.9%
154421 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.58 47.0 3.86e-01 89.5% 68.7%
3719711 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.57 47.0 4.17e-01 88.6% 90.7%
3719635 7512.1.1.88 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_61 0.57 46.0 3.99e-01 87.6% 76.2%
3485548 2007.1.3.28 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Glyco_transf_61 0.57 46.0 3.97e-01 89.5% 80.6%
3387039 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.56 48.0 4.56e-01 96.2% 78.4%
5025474 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.56 44.0 3.77e-01 84.8% 69.1%
4194153 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.56 48.0 4.63e-01 94.3% 84.2%
3655821 207.1.1.95 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.56 45.0 3.51e-01 90.5% 54.8%
3990915 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.55 43.0 3.88e-01 84.8% 97.3%
3815695 2006.1.4.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN 0.53 44.0 3.98e-01 88.6% 70.0%
3622925 7590.1.1.2 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.53 43.0 3.53e-01 87.6% 57.9%
3710589 2007.1.3.28 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Glyco_transf_61 0.53 46.0 3.95e-01 97.1% 75.3%
4542221 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.53 47.0 3.75e-01 100.0% 66.5%
4997436 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.52 47.0 4.37e-01 99.0% 96.9%
3791797 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.51 44.0 3.76e-01 94.3% 74.1%
3948974 2007.2.5.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese 0.51 40.0 3.86e-01 89.5% 74.2%
3947383 2010.1.1.3 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man 0.51 41.0 3.81e-01 87.6% 91.9%
3937284 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.51 43.0 3.59e-01 92.4% 55.6%