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IMGVR_UViG_3300001482_000079-3300001482-rank07_1021351931
Arc-VirIMGVR_UViG_3300001482_000079-3300001482-rank07_1021351931
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-105
Domain cluster:
rep: IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_100001549__D2-102
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14191.13 best | YodL | 66.8 | 3.50e-18 | 93.3% | 96.9% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3e8vA00 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.66 | 42.0 | 4.68e-01 | 99.0% | 81.7% |
| 2ntkB00 | 3.60.20.20 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Inosine monophosphate cyclohydrolase-like | 0.55 | 44.0 | 3.63e-01 | 88.5% | 94.1% |
| 2x1cB01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.54 | 47.0 | 3.51e-01 | 99.0% | 84.0% |
| 6mdsA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 39.0 | 3.47e-01 | 91.3% | 52.9% |
| 1zs7A01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.53 | 35.0 | 3.59e-01 | 100.0% | 68.3% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.53 | 39.0 | 3.71e-01 | 100.0% | 65.6% |
| 2m38A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 37.0 | 3.47e-01 | 71.2% | 91.1% |
| 2wzpP01 | 2.40.30.210 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.52 | 45.0 | 4.44e-01 | 93.3% | 99.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5014688 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.76 | 32.0 | 4.37e-01 | 96.2% | 76.4% |
| 4887360 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.65 | 24.0 | 3.11e-01 | 90.4% | 55.0% |
| 3919775 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 36.0 | 3.72e-01 | 88.5% | 67.0% |
| 3240214 | 11.1.1.447 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NDNF_C | 0.56 | 46.0 | 4.31e-01 | 88.5% | 70.8% |
| 4959439 | 243.3.1.80 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PF30787 | 0.55 | 32.0 | 3.63e-01 | 95.2% | 75.0% |
| 4938962 | 11.1.1.1410 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CarboxypepD_reg | 0.53 | 35.0 | 3.70e-01 | 95.2% | 74.7% |
| 5057849 | 210.1.1.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits | 0.52 | 43.0 | 3.48e-01 | 91.3% | 92.2% |
| 3910715 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.51 | 45.0 | 4.15e-01 | 96.2% | 100.0% |
| 3814935 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 3.49e-01 | 89.4% | 73.0% |
| 4527641 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.51 | 44.0 | 3.68e-01 | 100.0% | 68.7% |
| 3167133 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.50 | 43.0 | 3.68e-01 | 100.0% | 71.9% |
| 4461893 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.50 | 40.0 | 2.53e-01 | 87.5% | 97.4% |