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IMGVR_UViG_3300001526_000004-3300001526-A105W1_100783910
Arc-VirIMGVR_UViG_3300001526_000004-3300001526-A105W1_100783910
Identity
- Kingdom:
- archaea
Quality
94.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-87
Domain cluster:
rep: GQ478086.1__ACZ64040.1__X__00021__D3-94
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1te5A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.71 | 47.0 | 3.29e-01 | 100.0% | 22.9% |
| 2v4jA03 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.65 | 46.0 | 3.54e-01 | 74.4% | 60.6% |
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.57 | 32.0 | 3.81e-01 | 100.0% | 81.4% |
| 1p1hB01 | 3.30.2360.10 | Alpha Beta › 2-Layer Sandwich › Glyceraldehyde-3-phosphate dehydrogenase-like fold › Glyceraldehyde-3-phosphate dehydrogenase-like domain | 0.55 | 40.0 | 3.31e-01 | 81.4% | 52.3% |
| 1vwxr00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.53 | 45.0 | 4.04e-01 | 97.7% | 69.6% |
| 3c7fA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 42.0 | 2.94e-01 | 96.5% | 87.8% |
| 2hqsA01 | 3.40.50.10070 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TolB, N-terminal domain | 0.51 | 39.0 | 3.42e-01 | 86.0% | 87.3% |
| 2jdcA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 38.0 | 3.18e-01 | 97.7% | 46.9% |
| 8aa0E01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 43.0 | 3.05e-01 | 100.0% | 67.6% |
| 3ga4A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 40.0 | 3.35e-01 | 88.4% | 91.0% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.50 | 34.0 | 2.80e-01 | 95.3% | 34.8% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945393 | 7089.1.1.2 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF5405 | 0.95 | 85.0 | 8.83e-01 | 95.3% | 100.0% |
| 4022963 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.72 | 50.0 | 3.10e-01 | 72.1% | 25.4% |
| 3231135 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 42.0 | 3.87e-01 | 91.9% | 50.9% |
| 5053785 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 43.0 | 3.59e-01 | 70.9% | 47.1% |
| 4203354 | 252.2.1.9 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › PF27551 | 0.62 | 43.0 | 4.25e-01 | 73.3% | 77.9% |
| 4940634 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.62 | 41.0 | 3.43e-01 | 88.4% | 40.0% |
| 5053322 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 42.0 | 3.56e-01 | 70.9% | 42.8% |
| 5049059 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 41.0 | 3.52e-01 | 70.9% | 44.4% |
| 3382011 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.60 | 45.0 | 4.71e-01 | 91.9% | 86.3% |
| 3199439 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 43.0 | 3.41e-01 | 84.9% | 37.4% |
| 3618875 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.55 | 38.0 | 3.35e-01 | 72.1% | 68.9% |
| 3465186 | 5.1.8.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 | 0.55 | 41.0 | 3.61e-01 | 79.1% | 96.9% |
| 3723347 | 2008.1.1.143 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7924 | 0.54 | 45.0 | 3.06e-01 | 89.5% | 51.7% |
| 3464481 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.53 | 47.0 | 3.05e-01 | 96.5% | 37.9% |
| 3438132 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 39.0 | 3.65e-01 | 76.7% | 68.6% |
| 4036210 | 220.1.1.36 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 | 0.53 | 41.0 | 3.16e-01 | 84.9% | 36.6% |
| 3190430 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 43.0 | 3.40e-01 | 89.5% | 43.2% |
| 3598521 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 48.0 | 2.98e-01 | 100.0% | 30.2% |
| 3451695 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 40.0 | 3.96e-01 | 83.7% | 94.4% |
| 4010765 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.52 | 44.0 | 3.96e-01 | 95.3% | 77.6% |
| 5052265 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.52 | 43.0 | 3.87e-01 | 93.0% | 73.6% |
| 3913017 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.52 | 41.0 | 3.67e-01 | 87.2% | 75.2% |
| 4938611 | 295.1.1.53 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3467 | 0.52 | 35.0 | 3.94e-01 | 83.7% | 96.9% |
| 3265841 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.51 | 37.0 | 3.53e-01 | 75.6% | 77.0% |
| 5046724 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.51 | 43.0 | 4.00e-01 | 95.3% | 81.7% |
| 3179489 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.51 | 35.0 | 3.09e-01 | 73.3% | 65.0% |
| 4995216 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.51 | 40.0 | 2.60e-01 | 87.2% | 66.6% |
| 3207721 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.50 | 40.0 | 3.11e-01 | 90.7% | 59.1% |
| 3583260 | 220.1.1.187 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › VPS13_C | 0.50 | 43.0 | 3.86e-01 | 100.0% | 68.7% |