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IMGVR_UViG_3300001592_000812-3300001592-Draft_100165706

Arc-Vir

IMGVR_UViG_3300001592_000812-3300001592-Draft_100165706

Quality

83.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 54-155_157-159_507-576_578-629
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03237.22 best Terminase_6N 73.8 2.20e-20 98.7% 91.2%
D2 high residues 168-270_461-503
PDB
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lwyA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 74.0 7.62e-01 100.0% 92.8%
1mi8A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.85 73.0 7.50e-01 100.0% 92.2%
6zgqA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.85 79.0 7.97e-01 100.0% 96.6%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.82 73.0 7.40e-01 100.0% 93.8%
1dq3A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.82 79.0 7.27e-01 100.0% 96.0%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 76.0 7.17e-01 100.0% 95.9%
1zdeA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.78 73.0 7.02e-01 100.0% 88.7%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.78 74.0 6.99e-01 100.0% 95.9%
2imzA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.78 70.0 7.11e-01 100.0% 96.5%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.78 74.0 6.96e-01 100.0% 92.9%
6vgwA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.77 67.0 6.89e-01 100.0% 93.6%
2jmzA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.77 72.0 6.86e-01 100.0% 95.8%
1am2A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.77 73.0 6.72e-01 100.0% 95.6%
2lcjA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.77 72.0 6.61e-01 100.0% 96.2%
4e2tB00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.76 72.0 6.85e-01 100.0% 95.9%
1dfaA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.73 69.0 6.06e-01 100.0% 96.5%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 22.0 2.98e-01 95.2% 75.0%
1pqzA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 26.0 3.04e-01 93.8% 66.3%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 19.0 2.92e-01 93.8% 87.3%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5065932 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 79.0 8.08e-01 100.0% 93.6%
4045174 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 85.0 8.14e-01 100.0% 92.7%
5028312 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 75.0 7.68e-01 100.0% 91.4%
4950409 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 82.0 8.01e-01 100.0% 91.0%
5035795 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 78.0 7.88e-01 100.0% 93.1%
3602706 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.87 74.0 7.67e-01 100.0% 92.8%
5028788 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 76.0 7.76e-01 100.0% 93.6%
5030213 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 76.0 7.60e-01 100.0% 88.7%
4996401 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 83.0 8.03e-01 100.0% 93.8%
4940451 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 72.0 7.54e-01 99.3% 95.6%
3604113 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 77.0 7.73e-01 100.0% 94.5%
3282306 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 71.0 7.42e-01 100.0% 94.8%
4457379 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 71.0 7.17e-01 100.0% 88.3%
4600944 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 75.0 6.95e-01 100.0% 77.7%
4487998 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.83 74.0 6.94e-01 100.0% 77.7%
4070999 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.83 74.0 7.30e-01 100.0% 87.7%
4975971 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 69.0 7.35e-01 100.0% 96.2%
5035476 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 79.0 7.60e-01 100.0% 93.8%
3511246 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.82 75.0 7.14e-01 100.0% 84.8%
3603108 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 71.0 7.18e-01 100.0% 92.4%
4405940 242.1.1.8 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3, Intein_splicing 0.81 77.0 5.22e-01 100.0% 34.7%
4941327 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 72.0 7.28e-01 92.5% 94.5%
4274856 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 77.0 7.37e-01 100.0% 95.2%
5029355 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 76.0 7.60e-01 100.0% 96.0%
2546507 69.1.1.2 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint 0.81 72.0 7.30e-01 100.0% 95.1%
5029540 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 77.0 7.48e-01 100.0% 95.6%
4594307 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 77.0 7.24e-01 100.0% 95.3%
4979524 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 77.0 6.26e-01 100.0% 95.6%
4975578 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 77.0 6.06e-01 100.0% 54.2%
3949584 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 75.0 7.49e-01 99.3% 95.3%
3518586 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.80 72.0 6.35e-01 100.0% 67.3%
4996523 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 77.0 6.79e-01 100.0% 95.0%
4993454 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 77.0 6.37e-01 100.0% 94.5%
5031914 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 77.0 6.98e-01 100.0% 91.9%
2524072 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 77.0 7.22e-01 100.0% 94.7%
5012699 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 77.0 7.23e-01 100.0% 96.5%
4993853 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 77.0 7.31e-01 100.0% 95.8%
4943231 69.1.1.16 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › ATP-synt_ab 0.80 77.0 7.04e-01 100.0% 93.9%
4999902 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 72.0 7.26e-01 100.0% 95.2%
3604383 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 76.0 6.53e-01 100.0% 95.8%
4983458 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 76.0 7.27e-01 100.0% 95.2%
4629526 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 76.0 5.74e-01 100.0% 97.7%
4335483 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 76.0 6.39e-01 100.0% 96.9%
4977673 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 76.0 6.41e-01 100.0% 96.4%
4979989 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 75.0 6.94e-01 100.0% 92.8%
5066389 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 75.0 6.80e-01 100.0% 94.2%
4930433 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 76.0 7.45e-01 100.0% 94.2%
4945569 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 74.0 7.27e-01 100.0% 91.6%
4978473 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 75.0 7.12e-01 100.0% 97.1%
4992651 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 75.0 7.19e-01 100.0% 92.1%
5031634 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 75.0 7.25e-01 100.0% 90.6%
4993437 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 73.0 7.36e-01 97.9% 97.9%
4993581 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 75.0 7.07e-01 100.0% 92.4%
4342207 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 73.0 7.29e-01 100.0% 94.7%
4943244 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 75.0 7.06e-01 100.0% 95.9%
4993128 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.78 75.0 7.24e-01 100.0% 93.1%
4642797 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.78 74.0 7.03e-01 100.0% 95.3%
3936057 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.78 74.0 7.24e-01 100.0% 94.2%
5030499 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.78 72.0 7.18e-01 99.3% 94.0%
4971400 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.78 75.0 5.72e-01 100.0% 50.5%
4979631 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.78 73.0 7.26e-01 100.0% 95.3%
4997604 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.78 74.0 6.99e-01 100.0% 91.8%
4322985 2004.1.1.14 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU 0.78 65.0 4.73e-01 100.0% 35.8%
5022295 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 74.0 7.09e-01 100.0% 93.9%
4680886 69.1.1.14 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint_2 0.77 73.0 6.99e-01 100.0% 94.5%
4993480 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 74.0 7.16e-01 100.0% 94.4%
5065032 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.77 74.0 7.02e-01 100.0% 95.8%
4971412 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 72.0 6.65e-01 98.6% 97.2%
164902 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.77 72.0 6.68e-01 100.0% 89.4%
5014854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.77 73.0 6.26e-01 100.0% 94.4%
182766 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.77 72.0 6.61e-01 100.0% 96.2%
5013937 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.76 73.0 6.98e-01 100.0% 93.3%
3234017 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.76 72.0 6.77e-01 100.0% 85.5%
4983616 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.76 71.0 6.76e-01 100.0% 95.3%
5028299 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.76 72.0 7.09e-01 100.0% 94.8%
3604439 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.76 72.0 6.80e-01 100.0% 93.5%
4975503 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.76 72.0 6.64e-01 100.0% 95.6%
5052154 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.76 72.0 6.86e-01 100.0% 95.2%
4998394 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.76 70.0 6.84e-01 96.6% 96.8%
4948016 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.76 70.0 6.95e-01 97.9% 94.0%
4932851 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.76 61.0 6.38e-01 100.0% 92.6%
4940943 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.76 72.0 6.80e-01 100.0% 94.1%
4948019 69.1.1.17 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › MCM 0.75 71.0 6.60e-01 100.0% 93.1%
4984220 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.75 71.0 6.94e-01 100.0% 96.8%
4934481 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.74 67.0 6.75e-01 100.0% 95.9%
4326329 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.74 69.0 6.53e-01 100.0% 92.9%
3473873 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.52 28.0 3.55e-01 76.0% 92.5%
D3 high residues 644-795_797-821
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17289.9 best Terminase_6C 60.1 3.60e-16 85.3% 98.1%
D4 medium residues 271-385
PDB
D5 medium residues 386-460
PDB