Back to structures

IMGVR_UViG_3300001682_000662-3300001682-SAHD_1000721814

Arc-Vir

IMGVR_UViG_3300001682_000662-3300001682-SAHD_1000721814

Quality

59.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 40-92
PDB
D2 medium residues 93-173
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4wj7D00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.77 60.0 5.16e-01 88.9% 54.5%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.77 57.0 5.59e-01 88.9% 73.3%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.76 59.0 5.32e-01 87.7% 61.5%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.74 58.0 5.34e-01 91.4% 65.7%
4dxkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.73 50.0 4.30e-01 70.4% 98.4%
3t8qB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.68 48.0 4.23e-01 72.8% 99.1%
1aqcB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 53.0 4.61e-01 90.1% 56.6%
4qxaB00 2.30.29.230 Mainly Beta › Roll › PH-domain like › 0.66 55.0 4.54e-01 92.6% 75.5%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 38.0 4.23e-01 87.7% 75.4%
2rloA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 53.0 4.58e-01 91.4% 73.4%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 48.0 4.54e-01 84.0% 70.4%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 36.0 4.21e-01 85.2% 91.8%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.61 42.0 4.39e-01 85.2% 80.3%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 38.0 4.26e-01 85.2% 91.1%
7snsB01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 45.0 3.62e-01 81.5% 90.1%
1bqnA05 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.59 40.0 3.48e-01 70.4% 45.8%
2eabB01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.59 41.0 3.00e-01 74.1% 64.1%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.59 39.0 4.15e-01 84.0% 80.6%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 46.0 4.29e-01 88.9% 73.6%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 39.0 4.23e-01 87.7% 83.6%
4v19S00 3.30.420.80 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 0.58 41.0 3.50e-01 76.5% 88.8%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 46.0 3.92e-01 87.7% 88.5%
4bwgD00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 38.0 3.67e-01 71.6% 59.8%
1rl1A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 43.0 4.19e-01 87.7% 75.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 35.0 3.82e-01 88.9% 82.3%
4bg8A01 3.30.420.430 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.55 40.0 3.47e-01 77.8% 92.2%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 36.0 4.11e-01 92.6% 93.2%
2db2A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 38.0 3.65e-01 77.8% 62.8%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 43.0 3.64e-01 87.7% 77.3%
3jcuO01 2.40.160.30 Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor 0.55 38.0 3.09e-01 75.3% 88.1%
4csbA00 2.40.128.480 Mainly Beta › Beta Barrel › Lipocalin › Rhodococcus equi virulence-associated protein 0.54 43.0 3.89e-01 87.7% 79.6%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 41.0 3.99e-01 87.7% 73.9%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.54 34.0 3.62e-01 79.0% 74.3%
1f0cA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.52 43.0 3.80e-01 88.9% 74.6%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.52 42.0 3.62e-01 91.4% 69.3%
4v1ag00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 37.0 3.17e-01 77.8% 70.3%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 41.0 3.38e-01 91.4% 96.4%
4ntdA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 41.0 3.10e-01 87.7% 73.1%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.51 36.0 3.49e-01 72.8% 88.9%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.51 40.0 3.20e-01 87.7% 46.8%
1mbyA00 2.40.50.930 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 35.0 3.68e-01 72.8% 100.0%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 38.0 2.50e-01 82.7% 90.8%
5inwA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.50 41.0 3.76e-01 88.9% 79.6%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3924612 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.79 59.0 4.93e-01 90.1% 47.4%
3782222 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.78 63.0 4.99e-01 92.6% 44.5%
3509508 220.1.1.44 beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.76 60.0 5.73e-01 91.4% 71.6%
3298632 220.1.1.44 beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.76 59.0 5.54e-01 91.4% 68.0%
3992398 220.1.1.44 beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.75 60.0 5.26e-01 91.4% 59.1%
3731161 220.1.1.44 beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.75 53.0 5.64e-01 88.9% 84.3%
3591459 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.75 62.0 6.11e-01 91.4% 84.7%
4255589 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.75 53.0 4.89e-01 72.8% 60.0%
3700838 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.73 61.0 5.20e-01 91.4% 56.2%
3219484 220.1.1.44 beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.73 57.0 5.30e-01 91.4% 67.0%
4182291 223.1.1.5 a+b three layers › Profilin-like › sensor domains › sensor domains › HrcA 0.73 50.0 3.45e-01 72.8% 22.4%
4945655 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 54.0 5.03e-01 86.4% 64.0%
3719687 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 58.0 5.98e-01 92.6% 93.3%
4083184 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.72 49.0 4.57e-01 72.8% 57.0%
5009633 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 57.0 5.49e-01 87.7% 75.6%
4093535 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.72 58.0 4.89e-01 91.4% 53.8%
3949336 220.1.1.216 beta barrels › PH domain-like › PH domain-like › PH domain-like › Helicase_IV_N 0.72 58.0 5.24e-01 91.4% 64.5%
3496967 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 60.0 4.95e-01 91.4% 60.0%
4408024 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.71 43.0 4.89e-01 87.7% 81.7%
4622237 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.71 48.0 4.57e-01 71.6% 60.0%
4325808 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.71 49.0 4.64e-01 71.6% 61.1%
4211209 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.70 43.0 4.69e-01 87.7% 75.4%
4087673 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.70 48.0 4.53e-01 71.6% 58.0%
4489443 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.70 48.0 4.38e-01 71.6% 60.0%
3482227 220.1.1.43 beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH 0.70 64.0 5.61e-01 98.8% 73.0%
3619467 220.1.1.84 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_15 0.70 55.0 4.99e-01 85.2% 65.5%
4431607 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.70 47.0 4.44e-01 70.4% 57.0%
4073485 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.70 49.0 4.48e-01 74.1% 56.2%
3482713 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 59.0 4.91e-01 91.4% 62.2%
5049640 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 52.0 5.34e-01 85.2% 82.3%
4200272 218.1.1.0 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.70 46.0 4.50e-01 71.6% 61.1%
4265681 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.70 47.0 4.43e-01 70.4% 57.0%
427301 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.69 46.0 4.18e-01 71.6% 50.0%
4031599 101.1.2.584 alpha arrays › HTH › HTH › winged helix domain › HrcA 0.69 47.0 4.48e-01 71.6% 60.0%
4320111 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.67 46.0 4.30e-01 71.6% 57.0%
4127839 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.67 41.0 4.25e-01 87.7% 65.3%
4036940 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.66 45.0 4.27e-01 70.4% 58.9%
3948546 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.66 45.0 4.20e-01 87.7% 57.0%
4385005 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.66 46.0 4.37e-01 74.1% 62.1%
4497740 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.65 39.0 4.37e-01 86.4% 80.0%
4237578 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.64 42.0 3.70e-01 84.0% 45.0%
4937908 220.1.1.87 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.63 58.0 4.64e-01 100.0% 60.1%
3255946 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 48.0 4.90e-01 88.9% 83.7%
3943796 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.62 41.0 4.18e-01 88.9% 68.8%
4032501 4263.2.1.1 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.62 45.0 4.65e-01 90.1% 84.0%
3969569 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.61 37.0 4.18e-01 86.4% 81.7%
4391061 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.61 39.0 3.49e-01 87.7% 44.2%
4311691 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.60 40.0 3.43e-01 85.2% 40.7%
4451633 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.60 40.0 3.45e-01 87.7% 42.3%
3967128 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.59 37.0 3.94e-01 85.2% 72.9%
3737927 220.1.1.294 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26663 0.58 43.0 3.94e-01 84.0% 58.2%
4606688 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.58 41.0 4.25e-01 85.2% 81.3%
3838435 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.57 43.0 4.18e-01 86.4% 71.6%
3783625 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 46.0 2.98e-01 88.9% 89.0%
4049072 2.4.1.6 beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.56 43.0 3.91e-01 82.7% 71.8%
4623446 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.56 43.0 3.80e-01 85.2% 70.2%
3727380 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 38.0 3.29e-01 72.8% 60.0%
5080202 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.55 40.0 3.51e-01 77.8% 64.0%
3941442 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.55 40.0 3.48e-01 77.8% 66.4%
5032554 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.55 40.0 3.48e-01 77.8% 64.0%
3942738 295.1.1.29 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › YjeJ 0.55 44.0 3.53e-01 86.4% 85.8%
4029948 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.54 41.0 3.65e-01 87.7% 55.0%
4236717 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.54 41.0 3.63e-01 81.5% 68.3%
5042256 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.54 43.0 4.06e-01 86.4% 70.7%
3754695 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.53 40.0 3.54e-01 88.9% 53.6%
4079885 274.1.1.25 a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF 0.53 43.0 4.07e-01 87.7% 92.6%
4236900 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.52 39.0 3.43e-01 81.5% 66.7%
3553003 2003.1.5.111 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Rsm22 0.52 34.0 3.85e-01 84.0% 90.0%
4984579 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.52 42.0 2.62e-01 87.7% 37.2%
5077813 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.52 39.0 3.35e-01 81.5% 61.5%
3897327 2.1.1.241 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rsm22 0.52 33.0 3.88e-01 84.0% 96.4%
3611337 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 43.0 3.66e-01 97.5% 90.7%
4417109 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.50 36.0 3.40e-01 77.8% 68.6%
3718996 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 44.0 2.69e-01 96.3% 29.5%