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IMGVR_UViG_3300001682_000662-3300001682-SAHD_1000721821
Arc-VirIMGVR_UViG_3300001682_000662-3300001682-SAHD_1000721821
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-127
Domain cluster:
rep: NC_042001.1__YP_009610157.1__FDI28_gp81__00029__D22-140
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.70 | 49.0 | 4.85e-01 | 93.2% | 68.5% |
| 1xexB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 45.0 | 3.84e-01 | 91.3% | 46.0% |
| 3kxwA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.63 | 45.0 | 4.25e-01 | 89.3% | 61.3% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.58 | 51.0 | 3.49e-01 | 97.1% | 62.0% |
| 2v4jB03 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 31.0 | 3.65e-01 | 76.7% | 78.5% |
| 1regX00 | 3.30.70.650 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Translation repressor RegA | 0.57 | 40.0 | 3.82e-01 | 89.3% | 62.3% |
| 2debA03 | 3.30.559.70 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Choline/Carnitine o-acyltransferase, domain 2 | 0.55 | 47.0 | 3.46e-01 | 96.1% | 76.6% |
| 1lr0A00 | 3.30.1150.10 | Alpha Beta › 2-Layer Sandwich › Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag; Chain: A; Domain 2 › | 0.53 | 40.0 | 3.77e-01 | 96.1% | 65.1% |
| 5wceA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.53 | 31.0 | 2.95e-01 | 88.3% | 45.0% |
| 3ue3A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.52 | 39.0 | 4.02e-01 | 94.2% | 84.5% |
| 2vpzB01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 3.34e-01 | 81.6% | 54.1% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.52 | 36.0 | 2.95e-01 | 72.8% | 75.6% |
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.52 | 30.0 | 3.23e-01 | 88.3% | 67.4% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.51 | 36.0 | 3.41e-01 | 74.8% | 68.7% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3591115 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.70 | 45.0 | 4.59e-01 | 93.2% | 67.0% |
| 4954522 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.69 | 52.0 | 5.44e-01 | 100.0% | 87.2% |
| 4183868 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.68 | 49.0 | 5.38e-01 | 97.1% | 97.5% |
| 5060761 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.67 | 47.0 | 4.69e-01 | 94.2% | 70.5% |
| 4385049 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.66 | 47.0 | 4.68e-01 | 93.2% | 71.4% |
| 3962463 | 4011.1.1.0 ↗ | beta barrels › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins | 0.65 | 33.0 | 4.31e-01 | 75.7% | 89.1% |
| 4991990 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.64 | 47.0 | 4.79e-01 | 98.1% | 80.0% |
| 3617686 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 24.0 | 3.51e-01 | 70.9% | 82.2% |
| 3701882 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.60 | 48.0 | 4.94e-01 | 96.1% | 92.6% |
| 4982549 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.58 | 45.0 | 3.37e-01 | 83.5% | 44.1% |
| 3925690 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.58 | 40.0 | 4.50e-01 | 100.0% | 97.3% |
| 4956777 | 3696.1.1.0 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related | 0.58 | 32.0 | 3.56e-01 | 100.0% | 67.5% |
| 3800478 | 304.28.1.9 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Patched | 0.57 | 51.0 | 3.05e-01 | 100.0% | 15.6% |
| 3857887 | 5094.1.1.11 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › Fy-3 | 0.56 | 39.0 | 4.33e-01 | 100.0% | 98.7% |
| 3560901 | 601.19.1.20 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Fy-3 | 0.56 | 39.0 | 4.33e-01 | 100.0% | 98.7% |
| 4972768 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.55 | 41.0 | 2.97e-01 | 96.1% | 28.1% |
| 3588223 | 304.156.1.0 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain | 0.54 | 38.0 | 4.03e-01 | 92.2% | 83.3% |
| 3217273 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 40.0 | 2.81e-01 | 76.7% | 62.9% |
| 3735615 | 3670.1.1.2 ↗ | alpha complex topology › NCD2 domain › NCD2 domain › NCD2 domain › PF26087 | 0.54 | 27.0 | 2.81e-01 | 88.3% | 46.0% |
| 3789263 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.53 | 48.0 | 3.45e-01 | 100.0% | 37.7% |
| 5009577 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 46.0 | 4.34e-01 | 96.1% | 83.2% |
| 3992603 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.53 | 37.0 | 2.75e-01 | 73.8% | 54.4% |
| 2393519 | 327.6.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › Germane | 0.53 | 36.0 | 3.28e-01 | 95.1% | 49.3% |
| 4888882 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.52 | 33.0 | 2.70e-01 | 70.9% | 34.6% |
| 3235660 | 304.151.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF25899 | 0.52 | 42.0 | 4.01e-01 | 89.3% | 80.0% |
| 5052204 | 205.1.1.0 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin | 0.51 | 30.0 | 3.27e-01 | 82.5% | 69.4% |
| 4156658 | 205.1.1.17 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_11 | 0.51 | 40.0 | 3.34e-01 | 87.4% | 71.8% |
| 3905302 | 284.1.3.8 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › Fy-3 | 0.50 | 38.0 | 4.05e-01 | 96.1% | 97.6% |