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IMGVR_UViG_3300001865_000266-3300001865-JGI2065J20421_1000029219

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300001865_000266-3300001865-JGI2065J20421_1000029219 ↗
Kingdom:: archaea

Quality

76.4 mean pLDDT

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-130

PDB

Domain cluster: rep: IMGVR_UViG_3300013091_000045-3300013091-Ga0163210_100646610__D7-121

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4ceiA03	6.10.250.2380	Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.58	32.0	3.30e-01	71.1%	55.4%
4g12A02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.57	43.0	4.06e-01	90.9%	64.4%
1mijA00	1.10.10.500	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeo-prospero domain	0.57	34.0	3.29e-01	89.3%	49.6%
1jr8A00	1.20.120.310	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain	0.55	32.0	3.47e-01	96.7%	66.7%
7c4sB01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.55	38.0	2.99e-01	72.7%	41.7%
3geeA02	1.20.120.430	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2	0.53	36.0	3.33e-01	71.1%	97.0%
1x9fC00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.53	36.0	3.39e-01	70.2%	78.5%
3rv0C02	1.10.1520.10	Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain	0.52	37.0	3.51e-01	74.4%	63.2%
1st6A03	1.20.120.810	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle	0.51	36.0	2.92e-01	74.4%	37.6%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3444302	611.9.1.4 ↗	alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N	0.64	44.0	4.31e-01	71.1%	88.1%
3725257	109.3.1.148 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Goodbye	0.62	56.0	4.59e-01	100.0%	89.8%
4385508	4177.1.1.9 ↗	alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Snx8_BAR_dom	0.59	41.0	3.39e-01	71.1%	79.5%
3196950	611.7.1.12 ↗	alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Goodbye	0.59	53.0	4.46e-01	100.0%	89.3%
3468403	601.1.2.74 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Rx_N	0.57	40.0	3.87e-01	71.1%	90.4%
3228584	5001.1.1.84 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srz	0.55	41.0	3.18e-01	79.3%	81.1%
4418048	1075.1.1.0 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain	0.55	45.0	3.85e-01	88.4%	69.7%
3388147	7014.1.1.2 ↗	alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE	0.54	30.0	3.31e-01	100.0%	66.0%
5056276	3567.1.1.0 ↗	a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer	0.52	46.0	4.23e-01	100.0%	74.4%
4940777	1075.1.1.1 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane	0.50	46.0	3.58e-01	100.0%	84.3%