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IMGVR_UViG_3300001914_000109-3300001914-JGI24731J21663_10052066
Arc-VirIMGVR_UViG_3300001914_000109-3300001914-JGI24731J21663_10052066
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-153
Domain cluster:
rep: ON529865.1__UTC29971.1__STASHLEY_00370__00038__D86-184
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4lmyA02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.62 | 18.0 | 2.77e-01 | 83.3% | 57.4% |
| 1neiA00 | 3.30.160.220 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG | 0.59 | 23.0 | 3.33e-01 | 100.0% | 76.7% |
| 3ue3A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.55 | 35.0 | 3.99e-01 | 97.0% | 87.6% |
| 1wmwB00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.50 | 41.0 | 3.12e-01 | 87.1% | 69.3% |
| 8a1gC01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.50 | 36.0 | 3.24e-01 | 72.7% | 89.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932757 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.67 | 40.0 | 3.67e-01 | 86.4% | 45.7% |
| 3672413 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 32.0 | 3.81e-01 | 87.1% | 68.9% |
| 3701068 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 31.0 | 3.81e-01 | 87.1% | 80.0% |
| None | — | 0.58 | 42.0 | 3.41e-01 | 97.0% | 40.0% | |
| 3214019 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.57 | 36.0 | 2.68e-01 | 100.0% | 25.1% |
| 4029943 | 3755.3.1.357 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › RIFIN | 0.54 | 49.0 | 4.21e-01 | 100.0% | 63.9% |
| 3996192 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.54 | 38.0 | 3.26e-01 | 72.7% | 46.2% |
| 3234006 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.53 | 37.0 | 2.90e-01 | 72.0% | 46.6% |
| 3232509 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.53 | 37.0 | 2.91e-01 | 72.0% | 46.2% |
| 3216326 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.52 | 37.0 | 2.84e-01 | 72.0% | 44.6% |
| 3224269 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.52 | 35.0 | 2.56e-01 | 100.0% | 24.7% |
| 3239359 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 36.0 | 2.79e-01 | 73.5% | 69.4% |
| 3405365 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 39.0 | 2.87e-01 | 81.8% | 85.1% |