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IMGVR_UViG_3300002052_000587-3300002052-SMTZ1_100163817

Arc-Vir

IMGVR_UViG_3300002052_000587-3300002052-SMTZ1_100163817

Quality

74.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-65
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 57.0 5.62e-01 100.0% 77.3%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 55.0 5.53e-01 98.3% 80.0%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.72 57.0 5.75e-01 100.0% 88.3%
1z87A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 50.0 4.33e-01 86.7% 97.0%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 53.0 3.38e-01 93.3% 38.2%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.62 52.0 4.46e-01 100.0% 78.8%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.62 51.0 4.64e-01 100.0% 81.1%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.61 52.0 4.88e-01 100.0% 84.2%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 53.0 4.23e-01 100.0% 66.9%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 51.0 3.03e-01 96.7% 47.5%
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.60 44.0 4.21e-01 100.0% 67.6%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.60 53.0 3.64e-01 100.0% 47.1%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 51.0 4.65e-01 100.0% 70.9%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.59 52.0 3.97e-01 100.0% 58.9%
1sg5A01 2.30.30.400 Mainly Beta › Roll › SH3 type barrels. › Rof-like 0.59 49.0 4.63e-01 100.0% 79.2%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 42.0 3.45e-01 75.0% 90.2%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 46.0 4.41e-01 96.7% 77.1%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 51.0 4.02e-01 100.0% 58.1%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 4.18e-01 100.0% 76.6%
2ojhA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 47.0 3.04e-01 91.7% 45.5%
4wsfA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 45.0 3.83e-01 90.0% 58.6%
2psbA00 3.50.90.10 Alpha Beta › 3-Layer(bba) Sandwich › YerB-like fold › YerB-like 0.57 46.0 3.00e-01 91.7% 80.3%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 46.0 4.72e-01 93.3% 100.0%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 4.05e-01 100.0% 65.0%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 47.0 4.80e-01 96.7% 100.0%
3rpiB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 41.0 3.49e-01 76.7% 95.9%
1ddvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 4.06e-01 100.0% 79.8%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 46.0 4.55e-01 100.0% 87.7%
3fm2A00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.56 45.0 3.69e-01 100.0% 68.4%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 46.0 4.26e-01 100.0% 81.0%
5c86A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 39.0 3.33e-01 75.0% 92.1%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 46.0 4.55e-01 96.7% 98.4%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 46.0 4.46e-01 100.0% 86.8%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 47.0 4.07e-01 100.0% 80.6%
2dlpA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 45.0 4.14e-01 96.7% 72.9%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 45.0 4.15e-01 95.0% 72.5%
1e2tA02 3.30.1120.150 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.55 40.0 3.61e-01 100.0% 55.8%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.55 44.0 4.21e-01 93.3% 98.6%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 45.0 4.56e-01 96.7% 96.7%
5d2lE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 36.0 3.08e-01 70.0% 91.7%
6lf2B01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 44.0 3.65e-01 98.3% 100.0%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 44.0 4.43e-01 95.0% 98.4%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 42.0 3.49e-01 85.0% 52.4%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 46.0 3.64e-01 100.0% 84.0%
1n26A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 42.0 3.92e-01 100.0% 69.2%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 43.0 4.25e-01 96.7% 87.7%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 44.0 4.43e-01 98.3% 100.0%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 42.0 4.19e-01 98.3% 87.9%
1k5dB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 43.0 3.37e-01 100.0% 63.7%
4a17E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.52 37.0 3.42e-01 78.3% 68.2%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 43.0 4.32e-01 100.0% 96.8%
8f5dA05 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.51 39.0 2.75e-01 86.7% 80.5%
1awoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 40.0 4.12e-01 91.7% 96.5%
1mkeA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 41.0 3.28e-01 100.0% 57.6%
2jeuA02 2.170.200.10 Mainly Beta › Beta Complex › Regulatory Protein E2; Chain: A; Domain 2 › Papillomavirus E2 early protein domain 0.50 40.0 3.47e-01 91.7% 78.2%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4499953 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 56.0 5.64e-01 100.0% 83.3%
5033892 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 61.0 5.98e-01 100.0% 86.2%
4460376 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.72 58.0 4.64e-01 88.3% 91.7%
5045214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 60.0 5.75e-01 100.0% 81.4%
4953913 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.72 55.0 5.58e-01 100.0% 85.0%
3627795 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 49.0 4.39e-01 75.0% 83.5%
4945344 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 58.0 3.63e-01 100.0% 17.5%
4033484 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 57.0 5.60e-01 100.0% 89.1%
3286662 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.68 56.0 4.86e-01 100.0% 58.0%
4118552 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 57.0 5.41e-01 100.0% 80.0%
3281271 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.66 56.0 5.01e-01 100.0% 68.9%
3289944 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.66 55.0 4.94e-01 100.0% 68.9%
4607576 4.1.1.370 beta barrels › SH3 › SH3 › SH3 › PF28261 0.66 55.0 5.33e-01 100.0% 87.1%
3926017 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 50.0 5.21e-01 100.0% 98.2%
3925408 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 48.0 5.07e-01 96.7% 100.0%
5000593 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.63 53.0 5.07e-01 100.0% 88.0%
3621099 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 55.0 4.64e-01 100.0% 75.2%
3508282 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.63 50.0 3.07e-01 88.3% 21.8%
1758949 4216.1.1.1 a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › HemS 0.63 54.0 4.24e-01 100.0% 63.2%
3517106 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 51.0 3.24e-01 93.3% 23.2%
3924149 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 45.0 4.76e-01 100.0% 98.0%
3991244 4.1.1.243 beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.61 42.0 4.55e-01 95.0% 97.8%
3507338 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 45.0 4.54e-01 100.0% 81.7%
4941620 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 48.0 4.89e-01 100.0% 91.7%
3512902 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.61 47.0 4.86e-01 96.7% 94.5%
3292855 220.1.1.36 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.60 53.0 4.18e-01 100.0% 64.0%
5058103 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.80e-01 100.0% 83.8%
3502388 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 46.0 4.30e-01 96.7% 68.0%
3411714 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 47.0 4.55e-01 100.0% 77.1%
4138563 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 49.0 4.84e-01 100.0% 87.7%
3643227 220.1.1.36 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.59 51.0 3.88e-01 100.0% 54.7%
3928361 220.1.1.46 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 0.59 52.0 3.95e-01 100.0% 73.6%
3845542 220.1.1.38 beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.59 47.0 4.16e-01 96.7% 83.0%
3487686 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 49.0 4.50e-01 100.0% 90.6%
4354770 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.58 50.0 4.83e-01 100.0% 85.7%
3231960 192.5.1.0 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.58 50.0 3.52e-01 100.0% 36.6%
3479384 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 3.42e-01 98.3% 47.1%
3940305 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.58 42.0 2.92e-01 100.0% 21.8%
3742084 220.1.1.67 beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 0.58 45.0 3.43e-01 90.0% 41.8%
4029057 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 49.0 4.15e-01 100.0% 81.9%
5012425 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.57 49.0 3.83e-01 100.0% 59.3%
3217113 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 46.0 4.53e-01 91.7% 89.2%
3896701 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 46.0 4.16e-01 95.0% 70.0%
3828657 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 49.0 4.22e-01 100.0% 85.0%
3932526 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.57 47.0 3.79e-01 100.0% 64.4%
3575243 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 46.0 4.63e-01 93.3% 100.0%
3748846 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 47.0 4.62e-01 96.7% 89.2%
3914346 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 48.0 4.29e-01 100.0% 67.8%
3876823 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 46.0 4.35e-01 95.0% 77.3%
3723092 220.1.1.36 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.56 49.0 3.95e-01 100.0% 73.3%
3511551 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 44.0 4.50e-01 96.7% 90.0%
3693093 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 48.0 3.86e-01 100.0% 70.4%
3398175 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 46.0 4.56e-01 96.7% 98.5%
3884716 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.56 46.0 3.71e-01 100.0% 61.5%
3886646 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 47.0 4.62e-01 98.3% 90.8%
3899275 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.56 46.0 3.71e-01 100.0% 63.7%
3573775 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 45.0 4.49e-01 96.7% 87.7%
3270547 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 46.0 4.55e-01 96.7% 90.8%
4483819 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.55 46.0 4.47e-01 98.3% 87.1%
3737825 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.55 44.0 4.57e-01 91.7% 100.0%
3525376 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.55 45.0 4.46e-01 96.7% 93.8%
4954545 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.55 45.0 3.95e-01 91.7% 85.6%
165657 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 44.0 4.28e-01 91.7% 83.6%
4458952 220.1.1.4 beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.54 46.0 3.67e-01 100.0% 66.7%
3842576 220.1.1.67 beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 0.54 44.0 3.69e-01 98.3% 69.2%
3548244 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 45.0 4.58e-01 98.3% 98.3%
3924337 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 45.0 4.58e-01 100.0% 100.0%
3259043 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.54 45.0 4.32e-01 98.3% 91.4%
3519897 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 44.0 3.59e-01 100.0% 73.1%
3458058 220.1.1.67 beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 0.53 45.0 3.65e-01 100.0% 65.6%
3413910 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.53 46.0 3.60e-01 100.0% 61.5%
4298724 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 46.0 3.44e-01 100.0% 69.7%
3391702 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 43.0 4.06e-01 98.3% 73.8%
3927305 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 44.0 3.73e-01 100.0% 84.5%
3243949 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.52 42.0 4.24e-01 98.3% 93.3%
4610859 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.52 43.0 4.27e-01 98.3% 90.8%
3608562 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 41.0 3.19e-01 100.0% 37.7%
3232211 11.2.1.58 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF26186 0.50 42.0 2.99e-01 100.0% 44.3%