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IMGVR_UViG_3300002053_001336-3300002053-SMTZ23_100214334

Arc-Vir

IMGVR_UViG_3300002053_001336-3300002053-SMTZ23_100214334

Quality

91.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-195
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00752.24 best XPG_N 25.6 2.00e-05 44.3% 72.3%
PF00867.24 XPG_I 46.5 5.30e-12 31.1% 53.4%
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a76A01 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.73 70.0 6.70e-01 100.0% 91.3%
5v07Z01 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.73 70.0 6.66e-01 100.0% 88.8%
5ybwA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.71 36.0 4.84e-01 91.8% 91.8%
1j0aA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.69 36.0 4.82e-01 84.2% 90.4%
2zsjA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 35.0 4.70e-01 91.8% 92.8%
1y7lA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 37.0 4.86e-01 97.8% 94.2%
2xryA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.67 48.0 5.31e-01 93.4% 89.9%
4d8tA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.66 38.0 4.75e-01 84.7% 93.6%
1o4wA00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.66 42.0 4.92e-01 89.6% 92.0%
6ptzA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 45.0 5.26e-01 90.7% 98.5%
3kljA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 35.0 4.41e-01 85.2% 85.5%
2kpoA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 35.0 4.47e-01 92.9% 88.2%
2pr7A00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.63 44.0 5.04e-01 92.9% 94.9%
2b0cA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.63 45.0 5.14e-01 92.3% 100.0%
4wnyA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 44.0 5.02e-01 90.7% 99.2%
1pzxB01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.61 36.0 4.35e-01 78.7% 87.7%
3loqA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 44.0 4.93e-01 92.9% 99.3%
2vhaA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.58 30.0 3.95e-01 91.8% 91.7%
3fg2P02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 35.0 4.11e-01 85.2% 84.9%
2r9zA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 34.0 4.09e-01 85.2% 87.3%
2akoA00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.58 51.0 4.66e-01 94.5% 100.0%
2j4jF00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.58 51.0 4.77e-01 94.5% 99.6%
5x1yA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 34.0 4.06e-01 85.2% 86.9%
5jciA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 35.0 4.02e-01 85.2% 83.3%
3fhlA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 39.0 4.43e-01 94.5% 93.5%
3hgmA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 43.0 4.77e-01 90.2% 100.0%
1e5nA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.56 47.0 3.81e-01 90.2% 89.3%
8c0zE01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 35.0 3.99e-01 85.8% 84.7%
3fg9C01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 41.0 4.64e-01 88.0% 100.0%
8ajjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 33.0 3.99e-01 92.3% 91.2%
8bkdA01 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.55 49.0 4.61e-01 96.7% 95.5%
3kl2F00 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.55 49.0 4.74e-01 95.6% 99.5%
2b3yA01 3.30.499.10 Alpha Beta › 2-Layer Sandwich › Aconitase; domain 3 › Aconitase, domain 3 0.54 46.0 4.25e-01 98.9% 69.5%
1j2rA00 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.54 48.0 4.84e-01 96.2% 100.0%
3a04A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 47.0 4.26e-01 94.0% 88.4%
6cmzA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 33.0 4.00e-01 85.2% 93.3%
7paxA01 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.53 48.0 4.27e-01 98.4% 89.8%
1y42X01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 47.0 4.09e-01 94.0% 83.1%
3cgxA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.52 42.0 3.87e-01 95.6% 66.1%
3u1vA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 44.0 4.18e-01 89.6% 83.3%
5g0gA00 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.51 45.0 3.64e-01 96.2% 81.1%
2ggsA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 38.0 3.72e-01 82.0% 69.3%
2r60A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.50 44.0 4.23e-01 95.1% 82.8%
3lqyA00 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.50 43.0 4.34e-01 92.9% 98.9%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5044998 2006.1.4.25 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I 0.94 92.0 8.77e-01 100.0% 90.2%
4979225 2006.1.4.25 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I 0.85 82.0 7.89e-01 100.0% 94.0%
3882124 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.82 71.0 6.69e-01 100.0% 75.8%
3808902 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.80 68.0 6.92e-01 100.0% 88.9%
3913336 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.80 68.0 6.86e-01 100.0% 87.0%
5049771 2006.1.4.25 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I 0.80 77.0 7.07e-01 100.0% 91.1%
3937732 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.80 68.0 6.78e-01 100.0% 85.3%
3484303 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.79 71.0 7.01e-01 100.0% 88.9%
5072240 2006.1.4.25 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I 0.77 74.0 7.13e-01 100.0% 93.5%
3238117 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.76 70.0 6.85e-01 100.0% 89.2%
3683988 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.76 73.0 6.90e-01 100.0% 88.8%
3721945 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.76 67.0 6.72e-01 100.0% 90.3%
5041361 2006.1.4.25 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I 0.76 57.0 6.19e-01 100.0% 90.3%
3784928 2006.1.4.32 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N, MKT1_N 0.75 69.0 6.16e-01 100.0% 71.4%
3428426 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.74 72.0 6.88e-01 100.0% 89.3%
3182237 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.74 66.0 6.40e-01 100.0% 84.5%
4024047 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.74 71.0 6.49e-01 100.0% 88.7%
4933316 2006.1.4.25 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I 0.74 71.0 6.54e-01 100.0% 89.8%
4946948 2006.1.4.25 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I 0.74 71.0 6.61e-01 100.0% 91.4%
3937112 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 71.0 6.14e-01 100.0% 71.8%
4028970 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 71.0 6.11e-01 100.0% 71.1%
3170744 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 71.0 5.85e-01 100.0% 62.0%
3718837 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 70.0 5.81e-01 100.0% 70.3%
4589814 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 71.0 6.28e-01 100.0% 89.4%
3472483 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 71.0 5.74e-01 100.0% 59.0%
3335892 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 70.0 5.95e-01 100.0% 67.9%
4927168 2006.1.4.19 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N 0.73 71.0 6.56e-01 100.0% 91.4%
3641274 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 70.0 5.93e-01 100.0% 92.9%
4395983 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 71.0 6.55e-01 100.0% 91.8%
None 0.73 70.0 6.54e-01 100.0% 88.6%
3701288 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.73 70.0 6.54e-01 100.0% 88.6%
4264908 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 70.0 6.60e-01 100.0% 85.6%
3823952 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 70.0 6.05e-01 100.0% 71.7%
4001799 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 70.0 6.11e-01 100.0% 71.0%
4237276 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 70.0 6.65e-01 100.0% 90.0%
4020826 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.73 70.0 6.13e-01 100.0% 72.2%
4964944 2006.1.4.25 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I 0.73 70.0 6.65e-01 100.0% 90.0%
3599611 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.73 70.0 5.86e-01 100.0% 71.2%
3581443 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 70.0 5.72e-01 100.0% 63.6%
3744314 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 70.0 5.96e-01 100.0% 66.5%
3789016 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 70.0 5.84e-01 100.0% 89.7%
5055638 2006.1.4.19 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N 0.73 70.0 6.64e-01 100.0% 90.5%
4426402 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.73 70.0 6.51e-01 100.0% 87.3%
4021778 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.73 70.0 5.83e-01 100.0% 89.3%
3610118 2006.1.4.46 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N, XPG_I, XPG_I_2 0.73 70.0 5.86e-01 100.0% 67.6%
4023084 2006.1.4.28 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › MKT1_N 0.72 70.0 6.05e-01 100.0% 73.5%
3393840 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.72 70.0 6.35e-01 100.0% 91.3%
3205760 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.72 70.0 6.04e-01 100.0% 91.5%
3520565 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.72 69.0 6.27e-01 100.0% 90.6%
3739745 2006.1.4.20 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I_2 0.72 65.0 5.61e-01 100.0% 64.9%
3471700 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.72 66.0 5.99e-01 100.0% 74.5%
3223707 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.72 69.0 6.20e-01 100.0% 85.0%
4028346 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.72 69.0 5.63e-01 100.0% 92.3%
3875510 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.72 69.0 6.55e-01 100.0% 89.5%
3607366 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.72 69.0 5.67e-01 100.0% 66.3%
4956546 2006.1.4.25 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I 0.71 69.0 6.46e-01 100.0% 91.6%
3938152 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.71 68.0 6.54e-01 100.0% 90.7%
3733625 2006.1.4.28 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › MKT1_N 0.71 68.0 6.02e-01 100.0% 74.8%
3638602 2006.1.4.32 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N, MKT1_N 0.71 68.0 5.63e-01 100.0% 64.1%
3781390 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.71 68.0 6.37e-01 100.0% 90.2%
3477276 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.70 68.0 6.13e-01 100.0% 91.9%
3627555 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.70 68.0 6.50e-01 100.0% 89.8%
3874759 2006.1.4.35 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PF27242 0.70 67.0 5.37e-01 100.0% 58.5%
4028436 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.70 66.0 5.80e-01 100.0% 71.0%
3919202 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.70 66.0 5.07e-01 100.0% 50.3%
3755557 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.70 66.0 5.97e-01 100.0% 79.2%
3272525 2006.1.4.28 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › MKT1_N 0.70 66.0 5.83e-01 100.0% 72.2%
142326 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.69 67.0 6.13e-01 100.0% 89.0%
3560378 2006.1.4.19 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N 0.69 66.0 5.43e-01 100.0% 60.0%
3484870 2006.1.4.19 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N 0.69 66.0 5.94e-01 100.0% 85.4%
3613309 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.69 66.0 6.12e-01 100.0% 87.1%
3416420 2006.1.4.52 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PF27698 0.69 66.0 4.60e-01 100.0% 44.2%
3486531 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.69 66.0 5.72e-01 100.0% 80.0%
3176999 2006.1.4.25 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I 0.69 66.0 5.96e-01 100.0% 89.8%
3267380 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.69 65.0 6.03e-01 100.0% 83.6%
3577639 2006.1.4.19 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N 0.68 65.0 6.29e-01 100.0% 90.5%
3498626 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.68 65.0 5.70e-01 100.0% 72.9%
5055988 2006.1.4.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 0.68 43.0 5.17e-01 88.5% 96.7%
3868746 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.66 62.0 5.06e-01 100.0% 62.8%
3518745 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.66 50.0 4.67e-01 100.0% 64.0%
5068529 2006.1.4.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 0.65 43.0 5.13e-01 95.1% 97.6%
3893248 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.65 61.0 4.33e-01 100.0% 38.3%
3193336 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.65 42.0 5.19e-01 73.2% 99.2%
4994951 2006.1.4.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 0.64 45.0 5.20e-01 95.1% 100.0%
3593761 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.62 49.0 4.71e-01 92.3% 72.7%
4955705 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.56 40.0 4.54e-01 88.0% 99.3%
5004320 2006.1.4.24 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_12 0.54 47.0 4.37e-01 94.0% 98.3%
4999144 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.53 45.0 4.54e-01 91.8% 91.1%
4999143 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.51 43.0 4.50e-01 91.3% 98.8%
D2 high residues 204-271
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5v07Z02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.83 74.0 7.11e-01 98.5% 98.7%
1b43A02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.82 68.0 7.14e-01 97.1% 100.0%
5k97A02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.80 71.0 7.11e-01 97.1% 100.0%
5hmlA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.76 65.0 6.14e-01 94.1% 92.5%
3zdbA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.69 59.0 5.44e-01 98.5% 84.3%
3qxzA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.67 40.0 4.24e-01 98.5% 68.3%
4n1kD00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.66 55.0 5.00e-01 100.0% 69.1%
2a1jB01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.63 47.0 4.72e-01 79.4% 91.3%
8d8lM01 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.59 41.0 3.89e-01 100.0% 61.7%
7zhgO01 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.59 39.0 3.96e-01 97.1% 69.7%
1ywfA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.58 49.0 3.42e-01 97.1% 66.4%
2vqeM01 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.56 39.0 3.89e-01 100.0% 70.4%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 45.0 3.36e-01 98.5% 88.4%
1nv8B01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.53 39.0 3.87e-01 98.5% 74.6%
1k32A03 3.30.750.44 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.52 43.0 4.28e-01 94.1% 97.2%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5044999 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.95 89.0 7.07e-01 98.5% 54.0%
4979226 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.91 78.0 6.44e-01 98.5% 55.5%
4360066 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.91 79.0 6.30e-01 98.5% 50.4%
4564320 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.88 79.0 6.42e-01 100.0% 55.1%
5041362 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.88 77.0 6.55e-01 100.0% 61.0%
3253562 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.87 80.0 7.51e-01 98.5% 98.8%
1308316 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.87 63.0 5.29e-01 100.0% 46.8%
4946949 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.86 77.0 6.31e-01 100.0% 56.5%
5028847 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.85 72.0 5.96e-01 98.5% 53.9%
5072955 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.84 76.0 6.18e-01 100.0% 55.0%
4024461 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.84 76.0 7.08e-01 100.0% 97.6%
4943719 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.83 75.0 6.09e-01 100.0% 55.0%
5003386 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.83 77.0 6.19e-01 100.0% 55.8%
5027938 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.83 73.0 6.03e-01 100.0% 56.5%
4092968 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.83 76.0 5.78e-01 98.5% 56.6%
4028493 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.83 68.0 7.21e-01 94.1% 100.0%
3170745 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.83 74.0 7.19e-01 98.5% 96.0%
3616505 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.82 75.0 5.62e-01 100.0% 65.6%
3744678 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.82 73.0 5.94e-01 98.5% 58.4%
4526159 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.82 71.0 6.32e-01 98.5% 68.8%
3787227 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.82 75.0 7.23e-01 100.0% 96.0%
4977223 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.82 75.0 5.86e-01 100.0% 50.4%
5049772 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.81 73.0 5.92e-01 98.5% 56.0%
3223617 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.81 73.0 5.46e-01 100.0% 63.0%
5036867 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.81 74.0 6.04e-01 100.0% 57.5%
5000872 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.81 74.0 5.93e-01 100.0% 54.4%
4489671 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.80 71.0 5.76e-01 98.5% 56.0%
4162420 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.79 70.0 5.65e-01 97.1% 55.2%
5023675 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.79 71.0 5.64e-01 100.0% 54.1%
2074406 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.77 69.0 5.88e-01 98.5% 76.4%
3956065 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.75 66.0 6.24e-01 98.5% 100.0%
3987574 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.75 67.0 4.34e-01 100.0% 26.4%
3261268 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.74 65.0 4.00e-01 98.5% 19.5%
4440292 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.74 66.0 5.55e-01 100.0% 65.2%
4995753 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.74 65.0 5.42e-01 100.0% 64.7%
4339694 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.74 66.0 3.94e-01 100.0% 16.8%
4367091 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.73 65.0 4.23e-01 100.0% 25.6%
3964109 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.73 65.0 6.37e-01 100.0% 100.0%
3593817 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.73 64.0 6.06e-01 97.1% 97.5%
2168201 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.73 63.0 5.18e-01 97.1% 62.7%
4303922 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.73 64.0 5.39e-01 98.5% 66.1%
4030601 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.73 65.0 5.48e-01 100.0% 67.8%
3293024 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.73 64.0 5.11e-01 98.5% 57.0%
None 0.72 64.0 5.85e-01 100.0% 86.7%
4233346 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 64.0 4.09e-01 100.0% 23.3%
3283743 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.72 62.0 3.96e-01 97.1% 22.1%
3329195 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.72 63.0 5.21e-01 100.0% 67.2%
3980678 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 64.0 4.06e-01 100.0% 25.1%
4429068 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.72 61.0 5.02e-01 95.6% 60.0%
4561919 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 62.0 4.24e-01 98.5% 31.4%
4319500 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 62.0 3.73e-01 98.5% 16.2%
3515038 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.72 63.0 5.20e-01 100.0% 68.0%
4575153 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.72 61.0 5.39e-01 98.5% 71.4%
4343577 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.72 62.0 4.23e-01 98.5% 30.6%
3163747 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.71 62.0 3.73e-01 98.5% 17.3%
3839957 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.71 62.0 3.97e-01 100.0% 23.8%
4364220 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.71 62.0 5.17e-01 100.0% 65.8%
4173211 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.71 61.0 3.93e-01 98.5% 23.1%
3610020 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.71 61.0 5.68e-01 97.1% 90.6%
4299586 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.70 59.0 5.61e-01 94.1% 100.0%
4030950 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.70 61.0 5.18e-01 98.5% 65.2%
4657900 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.70 61.0 5.13e-01 100.0% 64.2%
4594308 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.70 62.0 5.19e-01 98.5% 65.2%
4291004 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.70 61.0 3.99e-01 100.0% 24.6%
3388110 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.70 58.0 3.74e-01 94.1% 22.4%
4299768 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.70 61.0 5.26e-01 100.0% 68.2%
4306344 102.1.1.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.70 61.0 5.83e-01 100.0% 97.5%
4072515 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.69 59.0 3.64e-01 97.1% 17.9%
4990261 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.69 51.0 5.41e-01 77.9% 95.0%
5044456 102.1.3.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain › tRNA_NucTransf2 0.69 55.0 4.32e-01 88.2% 90.3%
5053077 102.1.3.4 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain › tRNA_NucTransf2 0.61 50.0 4.17e-01 92.6% 98.4%
3787124 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 42.0 2.63e-01 73.5% 41.8%