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IMGVR_UViG_3300002118_000035-3300002118-C687J26622_10003298
Arc-VirIMGVR_UViG_3300002118_000035-3300002118-C687J26622_10003298
Identity
- Kingdom:
- archaea
Quality
58.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-66
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bbwA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 48.0 | 3.31e-01 | 85.0% | 70.5% |
| 1olzA02 | 3.30.1680.10 | Alpha Beta › 2-Layer Sandwich › ligand-binding face of the semaphorins, domain 2 › ligand-binding face of the semaphorins, domain 2 | 0.58 | 41.0 | 4.26e-01 | 76.7% | 87.7% |
| 1ak2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 46.0 | 3.14e-01 | 88.3% | 71.8% |
| 2xb4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 44.0 | 3.08e-01 | 88.3% | 73.1% |
| 6zzmA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.55 | 41.0 | 2.80e-01 | 81.7% | 65.8% |
| 2zuoA08 | 2.30.30.620 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 36.0 | 3.66e-01 | 70.0% | 75.9% |
| 2ebqA00 | 4.10.1060.10 | Few Secondary Structures › Irregular › ZNF265 like › Zinc finger, RanBP2-type | 0.54 | 36.0 | 3.97e-01 | 78.3% | 89.4% |
| 3cr8C02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 39.0 | 2.75e-01 | 78.3% | 75.3% |
| 3axsA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 41.0 | 2.61e-01 | 86.7% | 28.6% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5036844 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 40.0 | 4.55e-01 | 73.3% | 80.0% |
| 5036185 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 46.0 | 4.68e-01 | 75.0% | 91.7% |
| 4527101 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.65 | 47.0 | 3.48e-01 | 78.3% | 31.2% |
| 5027411 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.64 | 54.0 | 3.14e-01 | 93.3% | 60.9% |
| 5050748 | 375.1.1.204 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PolC_DP2_central | 0.63 | 45.0 | 3.84e-01 | 76.7% | 54.9% |
| 3609075 | 375.1.1.4 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-RanBP | 0.63 | 44.0 | 3.77e-01 | 75.0% | 84.0% |
| 5059159 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.62 | 42.0 | 3.49e-01 | 71.7% | 47.8% |
| 5068448 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.62 | 43.0 | 3.52e-01 | 73.3% | 46.1% |
| 4325327 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 36.0 | 4.34e-01 | 71.7% | 100.0% |
| 4241211 | 375.1.1.204 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PolC_DP2_central | 0.62 | 45.0 | 3.84e-01 | 80.0% | 58.1% |
| 4933180 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 37.0 | 4.29e-01 | 85.0% | 100.0% |
| 3517439 | 375.1.1.25 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tfb4 | 0.60 | 41.0 | 4.19e-01 | 91.7% | 73.3% |
| 5001541 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.59 | 47.0 | 2.71e-01 | 88.3% | 61.8% |
| 4326569 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.58 | 40.0 | 3.94e-01 | 73.3% | 93.8% |
| 5031517 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.57 | 47.0 | 2.73e-01 | 91.7% | 55.2% |
| 4976938 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.56 | 46.0 | 2.65e-01 | 91.7% | 62.0% |
| 4970624 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.56 | 44.0 | 2.58e-01 | 88.3% | 60.5% |
| 4974717 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.56 | 43.0 | 2.72e-01 | 86.7% | 29.3% |
| 3500555 | 355.1.1.2 ↗ | few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › PSI | 0.55 | 41.0 | 4.37e-01 | 93.3% | 98.0% |
| 4974476 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.54 | 45.0 | 2.61e-01 | 98.3% | 63.3% |
D2
high
residues 73-145