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IMGVR_UViG_3300002120_000001-3300002120-C687J26616_10000003124

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300002120_000001-3300002120-C687J26616_10000003124 ↗
Kingdom:: archaea

Quality

79.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-67

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2x1dA02	1.10.10.2120	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.65	39.0	3.64e-01	83.6%	48.6%
1iurA01	1.10.287.110	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain	0.65	37.0	3.67e-01	98.4%	52.4%
2af0A02	1.10.167.10	Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2	0.61	44.0	4.10e-01	78.7%	97.5%
2pihA00	1.20.1500.10	Mainly Alpha › Up-down Bundle › YheA-like fold › YheA/YmcA-like	0.60	51.0	4.00e-01	91.8%	80.5%
3hr0B01	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.58	51.0	4.65e-01	96.7%	74.7%
2zyhA01	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.58	51.0	3.45e-01	100.0%	30.3%
2kjgA00	1.20.120.970	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.57	44.0	3.89e-01	90.2%	79.8%
2uuzB00	1.10.10.2020	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Host-nuclease inhibitor protein Gam	0.55	49.0	4.32e-01	100.0%	68.2%
1mhyG02	1.20.1280.30	Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2	0.53	39.0	3.71e-01	82.0%	65.8%
3h20A04	1.10.1240.50	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 ›	0.51	38.0	3.46e-01	85.2%	57.3%
1sxjB03	1.20.272.10	Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 ›	0.51	35.0	3.14e-01	73.8%	48.9%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4030256	603.2.1.0 ↗	alpha bundles › STAT-like › STAT › STAT	0.68	47.0	4.01e-01	96.7%	46.3%
3979446	5069.1.1.2 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Ni_hydr_CYTB	0.67	60.0	4.05e-01	100.0%	28.6%
3823640	101.1.1.65 ↗	alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4	0.65	57.0	4.66e-01	100.0%	57.4%
3262288	4030.1.1.0 ↗	alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz	0.64	51.0	5.18e-01	100.0%	85.0%
3895342	101.1.2.475 ↗	alpha arrays › HTH › HTH › winged helix domain › FIBP	0.62	46.0	3.39e-01	80.3%	42.4%
3799718	11.2.1.25 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PL48	0.61	56.0	3.65e-01	100.0%	24.8%
136703	3808.1.1.1 ↗	alpha arrays › Archaeal protein SSO6904 › Archaeal protein SSO6904 › Archaeal protein SSO6904 › Ca_bind_SSO6904	0.57	44.0	3.89e-01	90.2%	79.8%
3786675	192.7.1.0 ↗	alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm	0.56	46.0	4.57e-01	90.2%	98.5%
3994165	633.16.1.0 ↗	alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like	0.52	33.0	3.14e-01	85.2%	50.0%
185297	6035.1.1.2 ↗	alpha bundles › Primase helical domain › Primase helical domain › Primase helical domain › RepB_primase_C	0.51	38.0	3.46e-01	85.2%	57.3%