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IMGVR_UViG_3300002120_000001-3300002120-C687J26616_10000003159
Arc-VirIMGVR_UViG_3300002120_000001-3300002120-C687J26616_10000003159
Identity
- Kingdom:
- archaea
Quality
91.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-218
Domain cluster:
rep: IMGVR_UViG_3300010239_000028-3300010239-Ga0136451_1000008938__D83-314
CATH (65)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1d8wC00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.78 | 74.0 | 5.86e-01 | 100.0% | 75.6% |
| 2vrkA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.76 | 72.0 | 5.90e-01 | 100.0% | 98.6% |
| 3tvaA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.76 | 71.0 | 6.37e-01 | 100.0% | 97.5% |
| 6ki3A01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.75 | 70.0 | 6.19e-01 | 100.0% | 99.7% |
| 5a6sA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.74 | 61.0 | 6.36e-01 | 100.0% | 92.8% |
| 3l5aA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 68.0 | 5.56e-01 | 99.1% | 83.9% |
| 2ddxA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.73 | 68.0 | 5.84e-01 | 100.0% | 92.0% |
| 4ovxA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.73 | 68.0 | 6.24e-01 | 100.0% | 96.7% |
| 6fcxA01 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.72 | 68.0 | 6.09e-01 | 99.5% | 94.3% |
| 3aptA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.72 | 68.0 | 6.02e-01 | 100.0% | 93.8% |
| 1jcjA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 66.0 | 6.22e-01 | 98.1% | 92.5% |
| 1yx1A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.72 | 67.0 | 6.31e-01 | 100.0% | 98.4% |
| 4g2dA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.71 | 67.0 | 5.78e-01 | 100.0% | 89.2% |
| 4v1xA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.71 | 66.0 | 5.52e-01 | 100.0% | 84.8% |
| 4cqbA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.71 | 66.0 | 5.81e-01 | 100.0% | 95.3% |
| 3a9iA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 66.0 | 6.11e-01 | 100.0% | 89.4% |
| 2qdeA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.71 | 66.0 | 6.31e-01 | 99.5% | 92.9% |
| 1i4nA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 66.0 | 6.16e-01 | 100.0% | 82.9% |
| 6arhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 66.0 | 5.82e-01 | 100.0% | 75.3% |
| 1rjqA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.70 | 65.0 | 5.80e-01 | 100.0% | 94.9% |
| 1nqkA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.70 | 65.0 | 5.49e-01 | 100.0% | 95.4% |
| 3bwwA01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.70 | 65.0 | 6.12e-01 | 100.0% | 94.1% |
| 3cyjA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.70 | 65.0 | 6.23e-01 | 99.5% | 88.2% |
| 3ijlA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.70 | 63.0 | 6.19e-01 | 100.0% | 89.0% |
| 3b8iC00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.70 | 60.0 | 5.41e-01 | 90.0% | 74.8% |
| 4jz5A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.70 | 60.0 | 6.13e-01 | 100.0% | 92.2% |
| 5tcgA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.69 | 65.0 | 6.11e-01 | 100.0% | 91.6% |
| 2hzgA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.69 | 64.0 | 6.09e-01 | 99.5% | 88.7% |
| 2qgyA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.69 | 64.0 | 6.18e-01 | 99.5% | 91.2% |
| 4ff5A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.69 | 62.0 | 6.08e-01 | 100.0% | 88.1% |
| 1tkkA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.69 | 64.0 | 6.09e-01 | 99.5% | 88.1% |
| 1xwyA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.69 | 64.0 | 5.97e-01 | 100.0% | 92.7% |
| 1geqB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.69 | 63.0 | 6.04e-01 | 99.5% | 96.7% |
| 1rvkA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.68 | 64.0 | 5.88e-01 | 99.5% | 86.4% |
| 1dtnA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.68 | 62.0 | 6.02e-01 | 99.5% | 88.3% |
| 2f6uA00 | 3.20.20.390 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases | 0.68 | 63.0 | 6.16e-01 | 98.6% | 96.5% |
| 2qr6A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 63.0 | 5.31e-01 | 100.0% | 86.3% |
| 1nfgA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.68 | 63.0 | 5.30e-01 | 100.0% | 87.1% |
| 1vpyA00 | 3.20.20.410 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Protein of unknown function UPF0759 | 0.68 | 63.0 | 5.97e-01 | 100.0% | 96.8% |
| 1e9iC02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.68 | 63.0 | 5.60e-01 | 100.0% | 89.9% |
| 3ro6A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.68 | 63.0 | 6.04e-01 | 100.0% | 88.7% |
| 2oztA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.67 | 59.0 | 6.04e-01 | 97.6% | 97.5% |
| 2pcqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 63.0 | 5.65e-01 | 100.0% | 74.8% |
| 1jpdX02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.67 | 59.0 | 6.03e-01 | 99.1% | 96.6% |
| 2pgeA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.67 | 61.0 | 5.99e-01 | 99.1% | 92.1% |
| 3snkA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 33.0 | 4.31e-01 | 89.1% | 83.2% |
| 3rf9B02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 57.0 | 5.16e-01 | 92.4% | 93.7% |
| 1b5tA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.64 | 60.0 | 5.45e-01 | 100.0% | 87.3% |
| 3pfmA00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.64 | 56.0 | 5.32e-01 | 91.9% | 90.9% |
| 4lj3A00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.62 | 58.0 | 5.39e-01 | 99.1% | 86.3% |
| 2yvtA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.60 | 50.0 | 4.75e-01 | 90.0% | 95.7% |
| 3o9zA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 31.0 | 3.86e-01 | 84.4% | 88.5% |
| 2c4kA01 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 41.0 | 4.58e-01 | 100.0% | 99.4% |
| 3umoA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 49.0 | 4.35e-01 | 99.5% | 98.7% |
| 2e4uA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 40.0 | 4.34e-01 | 89.1% | 92.5% |
| 7u7hA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 40.0 | 3.99e-01 | 77.7% | 72.6% |
| 2ixtA00 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.53 | 47.0 | 4.15e-01 | 96.7% | 98.7% |
| 2zc0A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 40.0 | 3.92e-01 | 90.5% | 72.1% |
| 2abqA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 47.0 | 4.21e-01 | 99.1% | 86.6% |
| 2o2gA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 43.0 | 4.36e-01 | 88.2% | 94.4% |
| 7uuim01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 4.30e-01 | 88.2% | 99.4% |
| 2h29A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 35.0 | 3.74e-01 | 88.2% | 77.1% |
| 3ie7A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 46.0 | 4.11e-01 | 99.1% | 86.1% |
| 3ewmA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 46.0 | 4.12e-01 | 98.1% | 98.0% |
| 3e82B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 33.0 | 3.89e-01 | 100.0% | 95.2% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.78 | 74.0 | 5.76e-01 | 100.0% | 96.2% | |
| 3628646 | 2002.1.1.185 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_99 | 0.78 | 74.0 | 5.88e-01 | 100.0% | 92.1% |
| 2629957 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.75 | 70.0 | 6.17e-01 | 100.0% | 98.3% |
| 4942181 | 2002.1.1.134 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 | 0.74 | 70.0 | 6.08e-01 | 100.0% | 88.6% |
| 3973116 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.74 | 69.0 | 5.92e-01 | 100.0% | 94.2% |
| 4939003 | 2002.1.1.113 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › CdhD | 0.73 | 69.0 | 5.94e-01 | 100.0% | 85.7% |
| 4008911 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.73 | 69.0 | 5.90e-01 | 100.0% | 93.1% |
| 1144707 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.73 | 68.0 | 6.24e-01 | 100.0% | 96.7% |
| 4068376 | 2002.1.1.116 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PdxJ | 0.73 | 68.0 | 6.28e-01 | 99.5% | 98.1% |
| 4142789 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.72 | 68.0 | 5.68e-01 | 100.0% | 89.0% |
| 3283012 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.72 | 67.0 | 6.30e-01 | 99.5% | 98.8% |
| 4149089 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.72 | 68.0 | 6.44e-01 | 100.0% | 98.0% |
| 3739883 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.72 | 67.0 | 5.95e-01 | 99.5% | 84.4% |
| 4268595 | 2002.1.1.90 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR | 0.72 | 68.0 | 5.92e-01 | 100.0% | 89.8% |
| 4347466 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.72 | 67.0 | 6.27e-01 | 100.0% | 82.4% |
| 5022883 | 2002.1.1.112 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_114 | 0.72 | 67.0 | 5.94e-01 | 100.0% | 91.2% |
| 3958140 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.71 | 67.0 | 6.29e-01 | 100.0% | 98.8% |
| 4990088 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.71 | 66.0 | 6.31e-01 | 100.0% | 95.1% |
| 3334050 | 2002.1.1.50 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › F_bP_aldolase | 0.71 | 61.0 | 5.47e-01 | 90.0% | 76.4% |
| 5065695 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.70 | 62.0 | 5.89e-01 | 93.4% | 100.0% |
| 4618618 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.70 | 60.0 | 5.65e-01 | 90.0% | 85.2% |
| 1284139 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.70 | 60.0 | 6.18e-01 | 100.0% | 94.1% |
| 3497166 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.69 | 60.0 | 4.81e-01 | 91.9% | 78.0% |
| 1918313 | 2002.1.1.28 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI | 0.68 | 62.0 | 6.24e-01 | 100.0% | 97.1% |
| 4936133 | 2002.1.1.108 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NMO | 0.68 | 63.0 | 5.60e-01 | 100.0% | 92.2% |
| 4128951 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.67 | 59.0 | 5.18e-01 | 91.9% | 92.7% |
| 4216529 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.67 | 59.0 | 5.11e-01 | 93.4% | 92.5% |
| 5039515 | 2002.1.1.43 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth | 0.67 | 58.0 | 5.52e-01 | 90.5% | 83.3% |
| 4556948 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.67 | 61.0 | 5.77e-01 | 98.1% | 93.6% |
| 4982125 | 2002.1.1.67 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pro_dh | 0.67 | 61.0 | 5.68e-01 | 98.6% | 85.3% |
| 4972512 | 2002.1.1.77 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RNase_P_p30 | 0.65 | 59.0 | 5.67e-01 | 100.0% | 86.0% |
| 4946094 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.65 | 50.0 | 4.40e-01 | 78.7% | 88.7% |
| 4381207 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.64 | 59.0 | 5.26e-01 | 97.6% | 86.9% |
| 3507577 | 2002.1.1.185 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_99 | 0.64 | 59.0 | 4.90e-01 | 100.0% | 71.0% |
| 3959945 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.63 | 59.0 | 5.52e-01 | 100.0% | 95.7% |
| 3812402 | 2002.1.1.19 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_17 | 0.63 | 54.0 | 5.54e-01 | 100.0% | 93.2% |
| 4584978 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 58.0 | 5.06e-01 | 97.6% | 87.5% |
| 4114029 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 56.0 | 5.10e-01 | 95.3% | 84.6% |
| 3347474 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.63 | 37.0 | 4.23e-01 | 98.6% | 76.2% |
| 3332618 | 2487.1.1.7 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA | 0.63 | 37.0 | 4.18e-01 | 98.6% | 73.9% |
| 3267879 | 2003.4.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0.63 | 31.0 | 3.90e-01 | 77.7% | 75.4% |
| 4948525 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.62 | 51.0 | 4.91e-01 | 84.8% | 83.3% |
| 3823492 | 304.7.1.30 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › PA | 0.62 | 37.0 | 4.24e-01 | 98.6% | 78.7% |
| 5010430 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.62 | 54.0 | 4.67e-01 | 93.4% | 92.0% |
| 4943916 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.61 | 55.0 | 5.15e-01 | 97.6% | 94.7% |
| 5018994 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.60 | 38.0 | 4.12e-01 | 95.7% | 72.1% |
| 5053852 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.57 | 51.0 | 4.29e-01 | 95.7% | 76.8% |
| 4960066 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.57 | 47.0 | 4.41e-01 | 87.7% | 95.8% |
| 3366498 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.55 | 37.0 | 4.26e-01 | 92.9% | 92.9% |
| 4056922 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 31.0 | 3.97e-01 | 86.3% | 95.2% |
| 3941622 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.53 | 49.0 | 4.34e-01 | 100.0% | 99.3% |
| 164102 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.53 | 48.0 | 4.21e-01 | 100.0% | 96.5% |
| 3589691 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.52 | 47.0 | 4.25e-01 | 99.5% | 99.7% |
| 4960351 | 2007.9.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 | 0.52 | 36.0 | 4.18e-01 | 94.3% | 98.7% |
| 3605500 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.52 | 39.0 | 3.98e-01 | 77.7% | 86.7% |
| 5037057 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.52 | 31.0 | 3.86e-01 | 89.6% | 93.8% |
| 9527 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.52 | 47.0 | 4.21e-01 | 99.5% | 99.0% |
| 3273995 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.52 | 41.0 | 3.89e-01 | 84.4% | 92.7% |
| None | — | 0.52 | 47.0 | 4.20e-01 | 99.5% | 99.3% | |
| 3968080 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.51 | 36.0 | 4.06e-01 | 90.0% | 92.1% |
| 4958031 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.51 | 40.0 | 4.21e-01 | 90.0% | 90.3% |
| 5000765 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.51 | 42.0 | 4.15e-01 | 86.3% | 95.1% |
D2
high
residues 345-493
Domain cluster:
rep: MF001361.1__ASZ77376.1__X__00001__D369-485
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h41A03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.82 | 65.0 | 7.09e-01 | 99.3% | 96.8% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.81 | 64.0 | 6.87e-01 | 100.0% | 93.8% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.77 | 60.0 | 6.56e-01 | 98.0% | 95.9% |
| 2e6nA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 32.0 | 3.75e-01 | 80.5% | 78.8% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.51 | 43.0 | 4.04e-01 | 90.6% | 95.7% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.50 | 23.0 | 3.04e-01 | 88.6% | 83.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4476649 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.83 | 69.0 | 7.23e-01 | 100.0% | 94.1% |
| 3393297 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 30.0 | 3.87e-01 | 79.2% | 86.3% |
| 5027750 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 21.0 | 3.19e-01 | 77.9% | 90.9% |
| 4228333 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 43.0 | 2.95e-01 | 91.3% | 30.1% |
| 5056041 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.50 | 45.0 | 3.73e-01 | 100.0% | 96.0% |
D3
medium
residues 224-343
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g54A02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.87 | 52.0 | 6.69e-01 | 74.2% | 100.0% |
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.86 | 55.0 | 6.57e-01 | 76.7% | 92.9% |
| 3bkhA01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.82 | 55.0 | 6.46e-01 | 81.7% | 95.3% |
| 1lbuA01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.81 | 55.0 | 6.61e-01 | 76.7% | 100.0% |
| 4bolA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.75 | 50.0 | 5.95e-01 | 76.7% | 100.0% |
| 1wh4A01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.53 | 38.0 | 4.11e-01 | 96.7% | 94.7% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3291401 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.88 | 55.0 | 6.58e-01 | 73.3% | 89.4% |
| 4032027 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.88 | 56.0 | 6.64e-01 | 73.3% | 90.6% |
| 224034 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.87 | 53.0 | 6.40e-01 | 75.0% | 90.1% |
| 4218606 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.87 | 56.0 | 6.79e-01 | 78.3% | 95.2% |
| 3263339 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.85 | 53.0 | 6.69e-01 | 71.7% | 100.0% |
| 4010440 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.82 | 50.0 | 6.27e-01 | 74.2% | 98.7% |
| 1165079 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.82 | 57.0 | 6.35e-01 | 75.8% | 88.5% |
| 3395 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.81 | 55.0 | 6.63e-01 | 75.8% | 100.0% |
| 3332533 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.81 | 55.0 | 6.08e-01 | 70.0% | 97.0% |
| 3275963 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.80 | 56.0 | 6.40e-01 | 77.5% | 94.4% |
| 3299934 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.80 | 56.0 | 6.03e-01 | 71.7% | 85.7% |
| 3060287 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.80 | 44.0 | 5.55e-01 | 74.2% | 88.0% |
| 4473649 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.80 | 55.0 | 6.49e-01 | 70.0% | 100.0% |
| 3201809 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.78 | 51.0 | 6.22e-01 | 80.0% | 100.0% |
| 3302194 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.78 | 55.0 | 6.12e-01 | 71.7% | 93.7% |
| 5019285 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.76 | 56.0 | 6.29e-01 | 80.0% | 95.8% |
| 1934000 | 144.1.1.2 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1,PG_binding_5 | 0.76 | 57.0 | 5.11e-01 | 77.5% | 58.9% |
| 1086899 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.75 | 48.0 | 5.91e-01 | 79.2% | 100.0% |
| 3933825 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.75 | 44.0 | 5.55e-01 | 70.0% | 94.7% |
| 3274761 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.75 | 55.0 | 4.89e-01 | 75.8% | 81.2% |
| 4011396 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.68 | 56.0 | 5.77e-01 | 85.0% | 91.2% |
| 4380775 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.67 | 48.0 | 3.98e-01 | 73.3% | 75.5% |
| 2819638 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.64 | 50.0 | 5.13e-01 | 82.5% | 84.5% |
| 3631772 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.63 | 50.0 | 4.35e-01 | 84.2% | 87.2% |
| 3901819 | 193.1.1.18 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › DUF2465 | 0.57 | 42.0 | 4.15e-01 | 76.7% | 93.6% |
| 3473937 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.50 | 37.0 | 3.12e-01 | 77.5% | 95.2% |
| 2756454 | 235.1.1.13 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_108,PG_binding_3 | 0.50 | 37.0 | 3.37e-01 | 80.0% | 56.9% |