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IMGVR_UViG_3300002120_000001-3300002120-C687J26616_1000000316

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300002120_000001-3300002120-C687J26616_1000000316 ↗
Kingdom:: archaea

Quality

86.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 208-296

PDB

Domain cluster: representative

CATH (35)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2gkmA00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.71	50.0	4.39e-01	73.0%	88.2%
3h20A04	1.10.1240.50	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 ›	0.69	59.0	5.95e-01	98.9%	93.3%
3aq5A00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.69	49.0	4.45e-01	74.2%	94.0%
1dlwA00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.68	49.0	4.43e-01	74.2%	94.8%
2ibdA02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.64	53.0	4.54e-01	93.3%	78.2%
3vprA02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.63	53.0	4.58e-01	94.4%	77.2%
3himA00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.62	52.0	4.10e-01	93.3%	57.4%
3dd7C00	1.20.120.1870	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Fic/DOC protein, Fido domain	0.62	54.0	4.91e-01	98.9%	81.1%
3juiA00	1.25.40.180	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.61	48.0	3.83e-01	84.3%	57.5%
2yhsA01	1.20.120.140	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain	0.61	39.0	3.85e-01	73.0%	59.8%
1j1jA01	1.20.58.190	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1	0.61	48.0	4.27e-01	86.5%	83.3%
2jo7A00	1.10.4170.10	Mainly Alpha › Orthogonal Bundle › Glycosylphosphatidylinositol-anchored merozoite surface protein › Glycosylphosphatidylinositol-anchored merozoite surface protein	0.60	49.0	3.71e-01	89.9%	77.7%
2hxoA02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.59	47.0	4.03e-01	86.5%	60.4%
3r2cA00	1.10.940.10	Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like	0.58	51.0	4.47e-01	100.0%	100.0%
1qrjA02	1.10.1200.30	Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Retrovirus capsid C-terminal domain	0.58	42.0	4.33e-01	77.5%	81.2%
2genA00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.58	48.0	3.90e-01	96.6%	60.6%
2f07B00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.58	49.0	3.86e-01	96.6%	58.7%
1q6aA00	1.10.1240.30	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain	0.56	45.0	4.36e-01	93.3%	91.6%
1wn0A00	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.55	38.0	3.44e-01	73.0%	68.7%
1wgwA00	1.20.120.140	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain	0.55	39.0	3.78e-01	74.2%	77.8%
1dd5A01	1.10.132.20	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor	0.55	38.0	3.64e-01	73.0%	92.7%
2clbA01	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.55	39.0	3.28e-01	75.3%	95.0%
4cpgA00	1.20.5.420	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C	0.54	33.0	3.60e-01	98.9%	76.8%
6fhpD00	1.10.390.10	Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2	0.54	36.0	4.22e-01	83.1%	100.0%
3ln6A01	3.30.590.20	Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 ›	0.54	47.0	3.10e-01	100.0%	92.6%
3c02A00	1.20.1080.10	Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein.	0.54	45.0	3.38e-01	95.5%	94.2%
1fx8A00	1.20.1080.10	Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein.	0.54	45.0	3.31e-01	94.4%	88.6%
2v5cA03	1.20.58.460	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like	0.53	38.0	3.44e-01	76.4%	98.5%
3p4tA03	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.53	43.0	3.64e-01	89.9%	66.7%
2p0vA01	1.50.10.10	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.52	42.0	2.77e-01	91.0%	97.7%
6n2nA01	3.40.920.10	Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III	0.52	44.0	3.60e-01	97.8%	87.1%
4xxiA00	1.10.490.20	Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins	0.52	41.0	3.59e-01	89.9%	65.3%
3cllA00	1.20.1080.10	Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein.	0.52	44.0	3.29e-01	96.6%	68.0%
2f2cA02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.51	44.0	4.23e-01	100.0%	83.0%
4x28C03	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.50	44.0	3.73e-01	95.5%	83.2%

ECOD (47)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5039859	6035.1.1.0 ↗	alpha bundles › Primase helical domain › Primase helical domain › Primase helical domain	0.75	67.0	6.70e-01	98.9%	98.9%
3952621	101.35.1.0 ↗	alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX	0.73	51.0	5.72e-01	71.9%	97.1%
3363285	109.4.1.1293 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1	0.68	45.0	3.82e-01	88.8%	40.7%
4859	613.1.1.1 ↗	alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c	0.66	59.0	4.46e-01	100.0%	56.1%
4210419	613.1.1.1 ↗	alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c	0.66	58.0	4.52e-01	100.0%	64.0%
5045580	613.1.1.1 ↗	alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c	0.65	58.0	4.67e-01	100.0%	68.0%
3318287	633.4.1.1 ↗	alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI	0.65	47.0	3.79e-01	77.5%	55.0%
4377496	613.1.1.1 ↗	alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c	0.65	57.0	4.28e-01	100.0%	58.7%
3421505	633.4.1.1 ↗	alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI	0.63	45.0	3.73e-01	76.4%	72.4%
4080911	613.1.1.1 ↗	alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c	0.63	55.0	4.30e-01	100.0%	56.1%
5057633	3651.1.1.0 ↗	alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain	0.63	48.0	4.44e-01	83.1%	63.5%
3823040	633.4.1.1 ↗	alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI	0.63	45.0	3.70e-01	76.4%	62.9%
5060617	3651.1.1.0 ↗	alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain	0.62	49.0	4.53e-01	85.4%	80.9%
3831865	633.4.1.1 ↗	alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI	0.62	45.0	4.01e-01	76.4%	83.8%
4932398	181.1.1.1 ↗	alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N	0.62	42.0	4.32e-01	71.9%	72.9%
3802836	633.4.1.1 ↗	alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI	0.62	45.0	3.65e-01	77.5%	69.7%
3510249	170.1.1.0 ↗	alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C	0.61	43.0	4.32e-01	78.7%	71.0%
5036580	314.1.1.4 ↗	a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2c	0.61	54.0	3.43e-01	100.0%	31.5%
4995064	613.1.1.1 ↗	alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c	0.61	53.0	4.01e-01	100.0%	89.1%
1171151	191.1.1.1 ↗	alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_1	0.61	46.0	3.94e-01	80.9%	59.9%
3384024	109.4.1.420 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR	0.60	42.0	4.19e-01	83.1%	68.4%
5024742	3651.1.1.0 ↗	alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain	0.60	46.0	4.18e-01	82.0%	60.8%
4600610	181.1.1.1 ↗	alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N	0.60	39.0	3.91e-01	71.9%	63.2%
3347027	603.1.1.1 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin	0.60	46.0	3.55e-01	84.3%	94.0%
3289695	191.1.1.54 ↗	alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_32	0.59	51.0	4.29e-01	97.8%	72.5%
3960314	608.1.1.1 ↗	alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD	0.59	47.0	4.38e-01	92.1%	67.8%
3515443	170.1.1.0 ↗	alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C	0.59	42.0	4.27e-01	79.8%	74.4%
3310600	5051.1.1.0 ↗	alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like	0.59	50.0	3.26e-01	100.0%	75.3%
5080288	613.1.1.0 ↗	alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	0.58	51.0	3.86e-01	100.0%	70.9%
3610860	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.58	47.0	4.04e-01	86.5%	92.1%
4093846	613.1.1.1 ↗	alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c	0.58	50.0	3.98e-01	100.0%	61.0%
4981283	613.1.1.0 ↗	alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	0.58	51.0	3.93e-01	100.0%	69.0%
3510248	613.1.1.1 ↗	alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c	0.58	50.0	3.94e-01	100.0%	59.0%
4994403	109.3.1.480 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Na_H_antiporter	0.57	51.0	4.35e-01	100.0%	80.0%
3228385	5.1.5.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40	0.56	45.0	2.77e-01	88.8%	23.4%
3303028	633.4.1.1 ↗	alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI	0.56	42.0	3.57e-01	82.0%	78.1%
4125972	101.1.6.4 ↗	alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C	0.56	44.0	4.30e-01	98.9%	79.0%
3413717	603.1.1.17 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE	0.55	43.0	3.16e-01	84.3%	65.3%
3683390	109.4.1.420 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR	0.55	44.0	3.87e-01	87.6%	91.9%
5044572	310.2.1.0 ↗	a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF	0.54	38.0	3.64e-01	74.2%	91.4%
4957834	101.1.2.920 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C	0.53	46.0	4.25e-01	100.0%	84.2%
5050845	633.6.1.1 ↗	alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1	0.53	44.0	3.54e-01	91.0%	61.7%
3564576	106.1.1.8 ↗	alpha arrays › Globin-like › Globin-like › Globin-like › HisK-N-like	0.52	41.0	3.53e-01	86.5%	70.0%
3250420	109.4.1.339 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TRAPPC-Trs85	0.52	43.0	2.96e-01	94.4%	49.4%
3534849	101.1.10.7 ↗	alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C	0.51	45.0	4.16e-01	100.0%	78.3%
3504717	106.1.1.8 ↗	alpha arrays › Globin-like › Globin-like › Globin-like › HisK-N-like	0.50	38.0	3.39e-01	86.5%	73.1%
1498402	633.6.1.1 ↗	alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1	0.50	43.0	3.64e-01	95.5%	79.3%

D2 high residues 655-715

PDB

Domain cluster: rep: NC_019912.1__YP_007236373.1__ISGA_15__00015__D9-82

CATH (100)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2vxzA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.95	88.0	8.51e-01	100.0%	90.9%
4g9yA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.93	88.0	6.53e-01	100.0%	54.4%
5f7qC01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.93	88.0	8.31e-01	100.0%	95.7%
2qwwC00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.93	82.0	6.05e-01	98.4%	41.3%
3bpvA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.93	87.0	6.45e-01	100.0%	54.7%
3gw2A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.92	84.0	7.10e-01	98.4%	63.4%
5dukB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.92	78.0	7.55e-01	90.2%	85.1%
3oopA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.92	82.0	6.14e-01	96.7%	43.3%
1ub9A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.91	84.0	6.96e-01	98.4%	63.0%
4asnA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.91	83.0	7.15e-01	98.4%	73.3%
1r1uB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.90	81.0	6.94e-01	98.4%	63.4%
4ijaA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.90	85.0	8.43e-01	100.0%	98.4%
2nnnC00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.90	83.0	6.31e-01	100.0%	56.1%
2fbiA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.90	83.0	6.25e-01	100.0%	52.2%
1s3jA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.90	82.0	8.08e-01	98.4%	98.4%
5eriA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.90	83.0	6.04e-01	100.0%	49.0%
4nb5B01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.90	82.0	7.29e-01	100.0%	80.0%
2dk8A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.90	82.0	8.02e-01	100.0%	96.9%
8agaA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.89	83.0	6.36e-01	100.0%	57.9%
1jgsA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.89	82.0	6.16e-01	100.0%	51.4%
2v9vA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.89	81.0	8.23e-01	100.0%	100.0%
1p6rA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.89	79.0	7.10e-01	96.7%	76.8%
7l1iA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.89	82.0	5.95e-01	100.0%	46.4%
3pqkA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.89	80.0	6.67e-01	98.4%	59.6%
4b8xA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.89	83.0	6.14e-01	100.0%	52.1%
4xrfA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.89	82.0	6.09e-01	100.0%	50.7%
4kmfA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.89	80.0	8.03e-01	100.0%	96.8%
1sfxB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.89	80.0	6.59e-01	98.4%	60.6%
2qvoA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.89	82.0	7.15e-01	100.0%	77.0%
3f6oB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.89	79.0	6.83e-01	98.4%	64.8%
1lj9B00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.88	82.0	6.05e-01	100.0%	52.8%
2xubA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.88	80.0	7.32e-01	98.4%	78.2%
2nyxB01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.88	80.0	5.95e-01	98.4%	44.4%
4em2A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.88	82.0	5.96e-01	100.0%	62.7%
2oqgB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.88	79.0	6.39e-01	98.4%	54.6%
4yifF00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.88	75.0	5.72e-01	96.7%	43.1%
4hw0C00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.88	78.0	6.68e-01	100.0%	63.4%
3bj6B00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.88	81.0	5.88e-01	100.0%	49.7%
5jbrA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.88	80.0	7.09e-01	100.0%	81.4%
1z05A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.88	82.0	7.66e-01	100.0%	94.4%
1r1tA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.88	76.0	6.44e-01	96.7%	59.2%
1ku9B01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.87	80.0	7.03e-01	100.0%	77.0%
3cjnA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.87	80.0	5.90e-01	100.0%	47.3%
2dk5A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.87	80.0	7.82e-01	100.0%	97.0%
3l09A02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.87	80.0	7.14e-01	100.0%	79.8%
2ethA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.87	79.0	5.89e-01	98.4%	44.7%
2a61B00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.87	77.0	5.84e-01	98.4%	43.1%
4rs8A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.87	80.0	7.09e-01	100.0%	73.8%
2mlgA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.87	80.0	7.33e-01	100.0%	84.4%
1qbjC00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.87	79.0	7.72e-01	100.0%	95.5%
6pcoC00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.87	79.0	6.05e-01	100.0%	56.8%
2d1hB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.87	78.0	6.58e-01	98.4%	61.2%
2rdpA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.86	76.0	5.72e-01	96.7%	42.1%
2hr3D02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.86	79.0	7.91e-01	100.0%	98.4%
3cuoD00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.86	75.0	6.47e-01	96.7%	62.8%
3bddD00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.86	81.0	6.05e-01	100.0%	48.5%
2l01A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.86	77.0	7.14e-01	100.0%	81.8%
2jt1A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.85	77.0	7.29e-01	98.4%	95.8%
1u5tA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.85	77.0	7.16e-01	100.0%	93.3%
3s2wG00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.85	79.0	5.97e-01	100.0%	51.9%
1tbxB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.85	78.0	6.75e-01	100.0%	75.6%
3g3zA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.85	76.0	7.56e-01	98.4%	98.4%
4wcgA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.85	76.0	7.61e-01	100.0%	96.7%
7dvrA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.85	76.0	5.69e-01	98.4%	46.8%
2mh2A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.85	74.0	7.33e-01	96.7%	98.4%
2pexA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.84	78.0	5.86e-01	100.0%	50.0%
3cuqA03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.84	75.0	6.85e-01	98.4%	76.2%
3broD00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.84	76.0	5.83e-01	100.0%	57.5%
5e1wA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.84	76.0	5.43e-01	100.0%	44.6%
3r4kB01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.84	76.0	7.52e-01	100.0%	95.2%
2l02A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.84	75.0	6.81e-01	100.0%	75.6%
2qlzA03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.84	70.0	7.00e-01	96.7%	88.9%
1sfuA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.84	75.0	7.18e-01	100.0%	91.4%
6uvuA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.84	74.0	6.18e-01	98.4%	57.7%
5y6iA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.83	74.0	7.01e-01	100.0%	82.2%
3k69A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.83	75.0	5.54e-01	100.0%	41.3%
2obpA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.83	76.0	6.84e-01	100.0%	84.0%
3e6mA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.83	75.0	5.58e-01	100.0%	46.6%
3lmmB05	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.83	73.0	7.40e-01	100.0%	100.0%
1zarA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.83	74.0	6.46e-01	98.4%	70.8%
5bpdD01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.82	71.0	6.66e-01	98.4%	78.7%
1p4xA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.81	72.0	5.68e-01	100.0%	58.3%
1u5tA03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.81	70.0	6.67e-01	96.7%	84.5%
5trdA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.81	69.0	6.20e-01	95.1%	76.2%
3cuqB03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.81	72.0	6.95e-01	100.0%	89.9%
3m8eA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.81	70.0	5.95e-01	98.4%	63.4%
4a6dA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.80	71.0	6.16e-01	100.0%	68.1%
2jscB01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.79	68.0	6.21e-01	96.7%	72.5%
2fa5A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.79	72.0	5.42e-01	100.0%	47.5%
2j5oA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.77	67.0	6.65e-01	98.4%	96.9%
1z6tA04	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.76	66.0	5.94e-01	100.0%	70.6%
2xzn800	3.30.63.20	Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain ›	0.76	65.0	5.67e-01	100.0%	63.4%
1wi9A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.75	63.0	6.43e-01	95.1%	100.0%
7cluA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.75	63.0	5.63e-01	100.0%	65.2%
1ufmA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.75	64.0	5.88e-01	100.0%	73.8%
1hw1A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.74	66.0	6.18e-01	100.0%	89.3%
4rgxB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.73	66.0	5.06e-01	100.0%	47.0%
2vqcA00	1.10.10.1470	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like	0.72	62.0	5.97e-01	100.0%	95.7%
6az1a00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.70	61.0	5.81e-01	100.0%	87.5%
2b0lC00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.69	57.0	5.10e-01	98.4%	70.2%

ECOD (100)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5080660	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.99	95.0	7.62e-01	100.0%	58.1%
5004094	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.98	94.0	9.22e-01	100.0%	93.8%
4970238	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.98	93.0	7.50e-01	100.0%	58.1%
5067395	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.97	93.0	8.30e-01	100.0%	76.2%
5083026	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.97	93.0	7.34e-01	100.0%	55.5%
4987121	101.1.2.650 ↗	alpha arrays › HTH › HTH › winged helix domain › DUF7343	0.97	93.0	7.46e-01	100.0%	58.1%
5059062	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.97	92.0	8.75e-01	100.0%	87.1%
4981571	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.97	89.0	6.98e-01	96.7%	51.3%
5062256	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.97	92.0	7.69e-01	100.0%	64.2%
5069368	101.1.2.136 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_20	0.97	88.0	8.87e-01	95.1%	96.7%
5062784	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.97	91.0	8.59e-01	98.4%	85.7%
4968310	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.97	92.0	8.43e-01	100.0%	81.3%
5008403	101.1.2.650 ↗	alpha arrays › HTH › HTH › winged helix domain › DUF7343	0.97	91.0	7.59e-01	98.4%	63.2%
5061096	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.96	91.0	8.18e-01	100.0%	76.2%
5061754	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.96	91.0	8.66e-01	100.0%	87.1%
5047052	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.96	91.0	6.35e-01	100.0%	36.3%
4969831	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.96	90.0	6.59e-01	98.4%	42.9%
5059708	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.96	90.0	8.51e-01	98.4%	85.7%
5059632	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.96	90.0	8.11e-01	100.0%	76.2%
4981509	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.96	88.0	8.30e-01	96.7%	84.3%
5050552	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.95	89.0	7.62e-01	98.4%	66.7%
5068269	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.95	89.0	8.20e-01	98.4%	80.0%
5058584	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.95	83.0	7.08e-01	91.8%	62.2%
4963526	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.95	89.0	7.23e-01	100.0%	58.1%
5053840	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.95	88.0	8.37e-01	98.4%	85.7%
5038732	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.95	88.0	7.55e-01	98.4%	66.7%
4999698	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.95	88.0	8.12e-01	98.4%	80.0%
5083233	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.95	88.0	8.35e-01	98.4%	85.7%
5018900	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.94	88.0	7.10e-01	98.4%	57.1%
5080952	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.94	89.0	7.49e-01	100.0%	66.3%
4969688	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.94	88.0	7.21e-01	98.4%	60.0%
4982130	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.94	88.0	8.14e-01	100.0%	81.3%
5062267	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.94	89.0	8.68e-01	100.0%	93.8%
5004095	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.94	88.0	7.75e-01	100.0%	71.8%
5083027	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.94	87.0	8.54e-01	98.4%	92.3%
5083259	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.94	87.0	7.33e-01	98.4%	63.2%
4944865	101.1.2.15 ↗	alpha arrays › HTH › HTH › winged helix domain › MarR	0.94	85.0	6.91e-01	96.7%	56.2%
4958728	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.94	87.0	7.81e-01	98.4%	75.0%
5067396	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.94	85.0	8.63e-01	96.7%	98.3%
5040337	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.94	88.0	7.53e-01	100.0%	67.8%
5040058	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.93	87.0	7.29e-01	98.4%	63.2%
5039280	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.93	86.0	7.41e-01	98.4%	66.7%
4945513	101.1.2.136 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_20	0.93	86.0	5.74e-01	98.4%	29.3%
4977284	101.1.2.136 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_20	0.93	86.0	6.37e-01	98.4%	42.9%
4958729	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.93	84.0	7.59e-01	96.7%	73.8%
5069962	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.93	87.0	8.24e-01	100.0%	87.1%
5058767	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.93	86.0	8.70e-01	98.4%	100.0%
5039413	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.93	88.0	6.68e-01	100.0%	65.6%
5053694	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.93	86.0	8.14e-01	98.4%	85.7%
5061099	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.93	84.0	8.50e-01	96.7%	98.3%
4965711	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.93	86.0	8.19e-01	98.4%	85.7%
4951152	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.93	86.0	7.91e-01	98.4%	80.0%
5040795	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.93	86.0	7.90e-01	98.4%	80.0%
5040362	101.1.2.135 ↗	alpha arrays › HTH › HTH › winged helix domain › MarR_2	0.93	84.0	8.50e-01	96.7%	98.3%
4951617	101.1.2.136 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_20	0.93	86.0	6.95e-01	98.4%	57.1%
5040361	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.93	84.0	6.81e-01	96.7%	56.2%
5061098	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.93	86.0	8.16e-01	100.0%	85.7%
5049318	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.93	85.0	8.35e-01	98.4%	92.3%
4969903	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.93	85.0	7.64e-01	98.4%	75.0%
5061883	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.93	84.0	7.56e-01	96.7%	73.8%
5040253	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.93	85.0	7.32e-01	98.4%	66.7%
5060488	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.93	85.0	7.18e-01	98.4%	63.2%
3602988	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.93	85.0	7.05e-01	98.4%	60.0%
4970077	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.92	85.0	7.65e-01	98.4%	75.0%
5070425	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.92	85.0	8.30e-01	98.4%	92.3%
5040397	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.92	85.0	7.16e-01	98.4%	63.2%
4989093	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.92	85.0	7.92e-01	98.4%	87.7%
4998646	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.92	85.0	7.31e-01	98.4%	66.7%
5068392	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.92	85.0	7.64e-01	98.4%	75.0%
4994269	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.92	86.0	7.54e-01	100.0%	71.8%
5082985	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.92	85.0	7.83e-01	98.4%	80.0%
5038636	101.1.2.136 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_20	0.92	86.0	7.72e-01	100.0%	76.2%
5038936	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.92	85.0	7.00e-01	98.4%	60.0%
5060893	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.92	86.0	7.96e-01	100.0%	81.3%
5070280	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.92	84.0	7.12e-01	98.4%	63.2%
5059899	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.92	84.0	7.41e-01	100.0%	70.6%
4961117	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.91	85.0	7.06e-01	100.0%	61.0%
5080737	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.91	84.0	7.73e-01	98.4%	80.0%
4951629	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.91	82.0	6.96e-01	96.7%	62.1%
5034835	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.91	84.0	7.08e-01	98.4%	63.2%
5060489	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.91	84.0	8.47e-01	98.4%	100.0%
5061217	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.91	82.0	7.80e-01	96.7%	84.3%
5039585	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.91	84.0	7.20e-01	98.4%	66.7%
5041450	101.1.2.673 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N	0.91	84.0	7.11e-01	100.0%	64.2%
4999697	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.91	83.0	7.02e-01	98.4%	63.2%
5062268	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.91	83.0	7.95e-01	98.4%	88.2%
4970239	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.90	83.0	7.89e-01	98.4%	85.7%
4993580	101.1.2.15 ↗	alpha arrays › HTH › HTH › winged helix domain › MarR	0.90	82.0	8.08e-01	98.4%	92.3%
4969689	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.90	81.0	7.93e-01	96.7%	90.8%
4959849	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.90	83.0	6.54e-01	98.4%	52.2%
5040674	101.1.2.136 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_20	0.90	83.0	7.35e-01	100.0%	71.8%
143631	101.1.2.15 ↗	alpha arrays › HTH › HTH › winged helix domain › MarR	0.90	83.0	6.12e-01	100.0%	49.3%
5057174	101.1.2.650 ↗	alpha arrays › HTH › HTH › winged helix domain › DUF7343	0.90	81.0	7.55e-01	98.4%	80.0%
5055623	101.1.2.128 ↗	alpha arrays › HTH › HTH › winged helix domain › DUF2582	0.89	81.0	7.97e-01	100.0%	93.8%
5080102	101.1.2.128 ↗	alpha arrays › HTH › HTH › winged helix domain › DUF2582	0.89	81.0	7.93e-01	100.0%	93.8%
4980393	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.88	80.0	7.70e-01	98.4%	88.2%
5049006	101.1.2.109 ↗	alpha arrays › HTH › HTH › winged helix domain › Rio2_N	0.87	79.0	7.55e-01	98.4%	91.4%
5069946	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.87	79.0	7.34e-01	100.0%	82.7%
4980218	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.87	77.0	7.19e-01	96.7%	78.7%
5041844	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.86	76.0	5.80e-01	96.7%	43.7%

D3 medium residues 22-82

PDB

Domain cluster: representative

CATH (58)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4yrdA02	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.76	52.0	4.18e-01	100.0%	37.0%
3h20A01	3.30.1490.240	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain	0.75	58.0	5.74e-01	100.0%	78.8%
1rlhA02	3.40.1520.10	Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like	0.70	51.0	4.30e-01	77.0%	100.0%
3r8qA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.69	53.0	4.65e-01	100.0%	56.7%
3nd1A02	3.30.950.10	Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain	0.68	52.0	4.26e-01	83.6%	45.5%
3ffyA00	3.30.950.10	Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain	0.67	46.0	3.87e-01	100.0%	40.2%
3loiA01	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.67	49.0	3.54e-01	82.0%	29.4%
5utkA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.66	49.0	4.48e-01	100.0%	59.0%
3lqmA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.66	50.0	4.28e-01	100.0%	50.0%
2jllA03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.65	51.0	4.37e-01	100.0%	53.1%
2dm4A01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.65	49.0	4.28e-01	100.0%	53.2%
2edyA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.65	49.0	4.16e-01	100.0%	48.5%
2dn7A00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.65	49.0	4.14e-01	100.0%	47.7%
2npnA02	3.30.950.10	Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain	0.64	49.0	4.17e-01	100.0%	48.6%
2e3vA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.64	53.0	4.49e-01	100.0%	54.4%
3b82A06	3.30.70.240	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.64	49.0	4.00e-01	85.2%	63.6%
1cbfA02	3.30.950.10	Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain	0.64	48.0	3.89e-01	86.9%	41.3%
4dohE02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.64	50.0	4.20e-01	98.4%	50.0%
2n1kA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.63	46.0	3.90e-01	100.0%	45.3%
4lsdF00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.63	49.0	4.24e-01	100.0%	53.1%
2cveA02	3.30.70.240	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.63	43.0	4.23e-01	70.5%	100.0%
6hyfA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.63	49.0	4.09e-01	100.0%	49.1%
7y8sB01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.63	49.0	4.42e-01	100.0%	60.9%
1rv9A00	3.60.140.10	Alpha Beta › 4-Layer Sandwich › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases	0.63	50.0	3.44e-01	91.8%	56.2%
1wfoA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.62	49.0	4.15e-01	100.0%	51.0%
4n5uA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.62	51.0	4.23e-01	100.0%	50.9%
2ww8A01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.62	44.0	3.75e-01	82.0%	44.3%
5e53A02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.62	50.0	4.38e-01	100.0%	59.1%
5e55B02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.62	50.0	4.38e-01	100.0%	59.1%
1darA05	3.30.70.240	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.61	46.0	4.19e-01	85.2%	86.2%
3hrzC01	2.20.210.20	Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold ›	0.61	44.0	4.68e-01	82.0%	98.0%
1fnfA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.61	48.0	4.17e-01	100.0%	56.4%
6k2eA01	3.30.70.240	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.61	45.0	4.42e-01	82.0%	97.1%
4ca1B02	2.60.210.10	Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	0.61	46.0	3.62e-01	83.6%	49.2%
1xffA00	3.60.20.10	Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain	0.60	50.0	3.47e-01	98.4%	40.8%
1ln0A00	3.40.1440.10	Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease	0.60	47.0	4.22e-01	88.5%	81.5%
2jvuA00	2.60.40.2290	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.59	48.0	4.14e-01	100.0%	57.1%
4nn5C02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.59	49.0	4.23e-01	100.0%	58.6%
3bpnC03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.58	51.0	4.37e-01	100.0%	62.4%
1dikA01	3.30.1490.20	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain	0.58	50.0	3.73e-01	96.7%	45.1%
1qysA00	3.30.1710.10	Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein	0.58	47.0	4.26e-01	98.4%	92.4%
3g7mA00	2.60.110.10	Mainly Beta › Sandwich › Thaumatin › Thaumatin	0.57	46.0	3.52e-01	93.4%	37.1%
4p04A01	2.60.40.3100	Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain	0.57	46.0	3.91e-01	98.4%	52.8%
1w99A02	2.60.120.260	Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like	0.57	42.0	3.00e-01	80.3%	39.8%
3ir9A02	3.30.1330.30	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12	0.56	48.0	3.94e-01	100.0%	55.0%
2o6cA00	2.60.40.2480	Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type	0.55	49.0	3.61e-01	98.4%	48.7%
5chtB00	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.55	40.0	2.69e-01	82.0%	22.0%
3q8pB04	3.30.1490.100	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain	0.55	48.0	4.03e-01	100.0%	62.0%
2jvfA00	3.30.1710.10	Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein	0.55	44.0	4.01e-01	98.4%	91.5%
7pupA01	3.30.470.20	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain	0.55	47.0	3.28e-01	100.0%	62.8%
2v5yA04	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.55	42.0	3.72e-01	100.0%	54.9%
2irmA00	3.60.40.10	Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain	0.54	45.0	2.89e-01	98.4%	87.9%
8bs9A01	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.54	49.0	3.10e-01	100.0%	59.0%
4wiwA02	3.10.50.10	Alpha Beta › Roll › Chitinase A; domain 3 ›	0.53	38.0	3.68e-01	75.4%	100.0%
4ecnA02	2.60.40.3540	Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458	0.53	45.0	3.70e-01	100.0%	53.3%
2jqzA00	2.60.40.150	Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain	0.51	41.0	3.41e-01	98.4%	46.6%
4h3wA02	2.60.120.1260	Mainly Beta › Sandwich › Jelly Rolls ›	0.51	43.0	3.33e-01	100.0%	46.7%
2b39A10	2.60.120.1540	Mainly Beta › Sandwich › Jelly Rolls ›	0.50	44.0	3.59e-01	100.0%	60.3%

ECOD (62)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5011497	862.1.1.0 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain	0.83	74.0	5.10e-01	100.0%	31.5%
3285401	3986.2.1.0 ↗	a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd	0.71	55.0	5.15e-01	100.0%	69.3%
4006337	3019.1.1.1 ↗	beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN	0.71	53.0	4.28e-01	80.3%	66.1%
5078886	331.3.1.0 ↗	a+b two layers › TBP-like › Bet v1-like › Bet v1-like	0.70	53.0	4.38e-01	100.0%	45.5%
4959407	304.163.1.3 ↗	a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118	0.70	51.0	5.53e-01	100.0%	96.0%
3510118	4076.1.1.0 ↗	a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like	0.68	52.0	5.44e-01	91.8%	92.7%
3920513	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.67	55.0	3.47e-01	100.0%	18.0%
1937092	1137.1.1.1 ↗	a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase	0.67	46.0	3.87e-01	100.0%	40.2%
3672250	207.1.1.116 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15	0.67	48.0	3.43e-01	80.3%	24.7%
3913598	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.66	52.0	4.40e-01	100.0%	50.5%
3922241	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.66	51.0	4.46e-01	100.0%	56.7%
3892161	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.65	51.0	4.01e-01	100.0%	40.0%
3622826	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.65	50.0	4.27e-01	100.0%	51.0%
4883192	3019.1.1.1 ↗	beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN	0.64	47.0	3.84e-01	80.3%	62.3%
5066749	210.1.3.5 ↗	a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7	0.64	53.0	3.57e-01	95.1%	43.3%
4995672	3115.1.1.0 ↗	a+b two layers › GP2-like › RplX-like › RplX-like	0.64	47.0	5.05e-01	100.0%	96.0%
4152762	2492.1.1.20 ↗	a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › APOBEC3	0.63	54.0	3.87e-01	98.4%	73.7%
4151900	301.1.1.2 ↗	a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3	0.63	54.0	4.19e-01	100.0%	49.3%
3868467	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.63	48.0	3.89e-01	100.0%	41.6%
5033992	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.63	49.0	4.03e-01	100.0%	46.1%
5049794	301.1.1.2 ↗	a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3	0.63	55.0	4.18e-01	100.0%	49.7%
3066660	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.63	49.0	4.23e-01	100.0%	53.5%
4666097	212.1.1.0 ↗	a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like	0.62	48.0	3.21e-01	85.2%	89.4%
4927303	525.1.1.1 ↗	a+b two layers › Urease, gamma-subunit › Urease, gamma-subunit › Urease, gamma-subunit › Urease_gamma	0.62	46.0	3.79e-01	82.0%	87.5%
3817222	221.1.1.1 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Fer2	0.62	47.0	4.16e-01	82.0%	75.3%
4654177	1119.1.1.1 ↗	a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW	0.62	50.0	3.49e-01	96.7%	97.1%
5060810	11.1.4.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like	0.62	43.0	3.85e-01	80.3%	51.8%
3573951	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.61	54.0	4.48e-01	100.0%	57.3%
3629393	382.1.1.0 ↗	few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like	0.61	47.0	4.33e-01	98.4%	65.0%
5068178	302.4.1.0 ↗	a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit	0.60	47.0	4.07e-01	85.2%	70.5%
5027350	301.1.1.2 ↗	a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3	0.60	49.0	3.89e-01	96.7%	42.8%
4995671	3115.1.1.12 ↗	a+b two layers › GP2-like › RplX-like › RplX-like › PF30567	0.60	44.0	4.66e-01	96.7%	98.0%
3601705	4121.1.1.0 ↗	a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like	0.59	52.0	3.26e-01	100.0%	46.3%
77927	821.1.1.1 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG	0.59	48.0	4.20e-01	91.8%	81.9%
4826450	10.4.1.0 ↗	beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain	0.59	42.0	4.15e-01	80.3%	71.2%
3504586	301.1.1.2 ↗	a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3	0.58	50.0	3.81e-01	100.0%	43.2%
4956437	301.1.1.2 ↗	a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3	0.58	52.0	4.00e-01	100.0%	48.1%
3958897	4187.2.1.0 ↗	a+b two layers › NosL/MerB-like › DUF2233 › DUF2233	0.58	49.0	4.04e-01	98.4%	71.7%
3726900	11.1.1.642 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_Pom152_1	0.58	52.0	4.25e-01	100.0%	63.6%
5031944	304.11.1.5 ↗	a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › DUF2102	0.58	47.0	3.98e-01	96.7%	67.8%
4004704	3115.6.1.2 ↗	a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597	0.57	39.0	4.19e-01	82.0%	100.0%
5065792	301.1.1.2 ↗	a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3	0.56	45.0	3.44e-01	100.0%	36.8%
4463006	3115.2.1.0 ↗	a+b two layers › GP2-like › GP2 › GP2	0.56	38.0	4.21e-01	77.0%	100.0%
5047755	2492.1.1.7 ↗	a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ	0.56	46.0	3.60e-01	95.1%	67.1%
3274993	10.12.1.52 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_8	0.56	48.0	2.98e-01	100.0%	28.3%
4979507	301.1.1.2 ↗	a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3	0.56	45.0	3.54e-01	98.4%	39.6%
4011483	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.55	49.0	3.99e-01	100.0%	60.9%
3997372	219.1.1.3 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH	0.55	49.0	3.01e-01	100.0%	34.4%
4930766	2492.1.1.7 ↗	a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ	0.55	45.0	3.56e-01	93.4%	71.9%
4810265	221.1.1.8 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd	0.55	38.0	3.84e-01	90.2%	74.6%
4252321	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.55	44.0	3.72e-01	90.2%	57.1%
3938229	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.54	46.0	3.66e-01	98.4%	54.5%
4796557	4012.3.1.0 ↗	a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9	0.54	44.0	4.38e-01	93.4%	93.7%
3608700	320.4.1.0 ↗	a+b two layers › R3H domain-like › PUB domain › PUB domain	0.54	40.0	2.94e-01	83.6%	93.7%
3968122	3115.6.1.2 ↗	a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597	0.54	37.0	3.98e-01	82.0%	100.0%
3992138	11.2.1.52 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_nem	0.54	45.0	3.52e-01	100.0%	44.0%
3975705	3115.6.1.0 ↗	a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon	0.54	38.0	3.99e-01	83.6%	96.0%
4873862	866.1.1.1 ↗	a+b duplicates or obligate multimers › CheC-like › CheC-like › CheC-like › FliM	0.53	41.0	3.26e-01	91.8%	60.7%
3267249	11.1.1.801 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035	0.53	46.0	3.50e-01	100.0%	46.7%
3252870	10.32.1.0 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like	0.52	46.0	3.29e-01	100.0%	56.4%
3369564	130.1.1.39 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › DUF7086	0.52	37.0	2.98e-01	80.3%	61.4%
3349141	375.1.1.182 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7086	0.51	37.0	2.97e-01	80.3%	61.4%

D4 medium residues 83-199

PDB

Domain cluster: rep: MN234206.1__QFG12290.1__PBI_RACECAR_277__00246__D97-238

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF16793.11 best	RepB_primase	25.2	1.90e-05	69.2%	16.7%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3h20A02	3.30.70.1790	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RepB DNA-primase, N-terminal domain	0.88	72.0	7.69e-01	84.6%	100.0%
2iruA02	3.30.70.3300	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.78	59.0	5.59e-01	79.5%	92.0%
2mkcA00	3.30.70.330	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain	0.56	44.0	4.47e-01	83.8%	89.0%
3rcnA02	3.20.20.80	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases	0.54	38.0	2.80e-01	73.5%	82.2%
2xhcA01	3.30.70.940	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain	0.53	39.0	4.25e-01	76.9%	95.8%
3nmeA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.53	34.0	3.77e-01	99.1%	83.5%
1rniA02	3.30.2250.10	Alpha Beta › 2-Layer Sandwich › Prim-pol fold › Bifunctional DNA primase/polymerase domain	0.52	45.0	4.57e-01	100.0%	100.0%

ECOD (32)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2721360	862.1.1.0 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain	0.84	73.0	6.17e-01	92.3%	61.1%
5011497	862.1.1.0 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain	0.83	68.0	5.56e-01	85.5%	55.0%
4441734	862.1.1.0 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain	0.83	72.0	6.04e-01	91.5%	66.5%
185296	862.1.1.4 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › RepB_primase	0.81	77.0	6.30e-01	100.0%	61.3%
2711606	862.1.1.5 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol	0.79	71.0	5.07e-01	97.4%	58.6%
3959043	862.1.1.0 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain	0.79	70.0	5.03e-01	96.6%	56.3%
3284431	862.1.1.5 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol	0.78	70.0	5.09e-01	96.6%	56.8%
None	—		0.78	69.0	5.04e-01	96.6%	57.7%
None	—		0.77	60.0	4.39e-01	82.9%	51.0%
4987159	862.1.1.5 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol	0.77	62.0	4.76e-01	86.3%	56.5%
5004385	862.1.1.0 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain	0.76	58.0	4.62e-01	79.5%	58.9%
4394681	862.1.1.4 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › RepB_primase	0.76	72.0	5.83e-01	100.0%	62.0%
5000831	862.1.1.5 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol	0.75	63.0	4.75e-01	90.6%	69.5%
5065288	862.1.1.0 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain	0.75	57.0	4.30e-01	80.3%	48.4%
5081312	862.1.1.0 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain	0.73	67.0	5.36e-01	98.3%	72.3%
4031372	862.1.1.12 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › PF29905	0.73	67.0	5.51e-01	98.3%	61.5%
5050906	862.1.1.0 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain	0.73	65.0	4.73e-01	97.4%	69.2%
5066297	862.1.1.5 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol	0.73	66.0	4.96e-01	99.1%	70.5%
3989046	862.1.1.8 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › AEP-TOTE	0.70	61.0	4.87e-01	94.9%	66.2%
4940784	862.1.1.3 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Prim-Pol	0.69	56.0	5.10e-01	94.0%	65.2%
4960053	862.1.1.3 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Prim-Pol	0.68	55.0	4.66e-01	85.5%	68.6%
4066041	304.55.2.7 ↗	a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › tRNA_synt_2f	0.62	47.0	3.86e-01	80.3%	97.7%
4190599	304.20.1.5 ↗	a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › tRNA_synt_2f	0.60	45.0	3.57e-01	79.5%	86.8%
4881297	304.8.1.1 ↗	a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C	0.60	42.0	4.69e-01	71.8%	98.9%
4180512	304.8.1.63 ↗	a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › tRNA_synt_2f	0.60	44.0	3.66e-01	78.6%	99.5%
3934946	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.55	38.0	3.17e-01	71.8%	96.4%
3877725	304.9.1.20 ↗	a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_8	0.55	43.0	4.02e-01	83.8%	67.6%
3980339	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.54	40.0	3.04e-01	76.9%	81.1%
4538531	327.11.2.0 ↗	a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I)	0.52	39.0	4.23e-01	99.1%	95.0%
3505910	390.1.1.0 ↗	few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like	0.51	29.0	3.25e-01	80.3%	71.1%
4298245	2484.1.1.32 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C	0.50	44.0	3.53e-01	100.0%	94.0%
5046495	223.2.1.0 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like	0.50	27.0	2.88e-01	99.1%	60.0%

D5 medium residues 318-398_422-437_512-541_640-653

PDB

Domain cluster: rep: IMGVR_UViG_3300000510_000431-3300000510-Foulum_10041203__D331-409_502-568

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4gx0A01	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.65	30.0	3.49e-01	90.1%	58.3%
3ousA00	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.64	30.0	3.84e-01	90.1%	75.6%
4h33A00	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.60	30.0	3.69e-01	90.1%	72.5%
2nr9A00	1.20.1540.10	Mainly Alpha › Up-down Bundle › Rhomboid-like fold › Rhomboid-like	0.57	39.0	3.48e-01	90.1%	51.0%
2guzB00	1.10.287.110	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain	0.55	26.0	3.70e-01	90.1%	95.4%
3n3dB00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.52	43.0	3.39e-01	90.1%	59.1%
2dkwA00	1.20.920.10	Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like	0.52	31.0	3.25e-01	80.9%	62.6%
1re0B02	1.10.1000.11	Mainly Alpha › Orthogonal Bundle › Arf Nucleotide-binding Site Opener; domain 2 › Arf Nucleotide-binding Site Opener,domain 2	0.51	32.0	3.52e-01	90.1%	74.8%
4rflA02	1.20.1090.10	Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain	0.51	38.0	3.47e-01	80.1%	89.9%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3358332	592.2.1.2 ↗	alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG	0.55	34.0	3.63e-01	88.7%	70.4%
3620069	633.1.1.0 ↗	alpha bundles › Bromodomain-like › Bromodomain › Bromodomain	0.52	33.0	3.76e-01	90.1%	85.7%
3167746	304.9.1.71 ↗	a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SNU71_RBD	0.51	39.0	3.90e-01	90.1%	77.3%
3396456	592.2.1.2 ↗	alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG	0.51	32.0	3.59e-01	89.4%	80.9%

D6 medium residues 399-421_438-511

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2hj1A00	3.10.20.280	Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like	0.53	32.0	3.55e-01	95.9%	75.3%
5iheB01	3.60.21.50	Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 ›	0.50	42.0	3.03e-01	94.8%	62.9%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4965344	328.9.1.4 ↗	a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › DUF5779	0.51	31.0	3.40e-01	95.9%	76.0%

D7 medium residues 557-639

PDB

Domain cluster: rep: MH179474.1__AWH14685.1__X__00053__D677-770

CATH (26)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1kxpD04	1.10.246.10	Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 ›	0.76	48.0	5.04e-01	74.7%	70.1%
1ls1A01	1.20.120.140	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain	0.69	47.0	4.66e-01	88.0%	66.3%
3sykA02	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.66	52.0	5.11e-01	94.0%	80.0%
2l3lA01	1.20.58.1250	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain	0.65	42.0	3.92e-01	71.1%	51.9%
1e94E03	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.65	54.0	5.00e-01	98.8%	70.8%
3kxeA00	3.30.2310.20	Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like	0.64	53.0	5.14e-01	90.4%	91.5%
3te6A02	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.64	52.0	4.78e-01	100.0%	67.9%
2gupA02	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.64	47.0	3.61e-01	78.3%	59.7%
1huxA02	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.63	47.0	3.97e-01	79.5%	84.3%
2eb1C00	1.10.1520.10	Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain	0.62	51.0	4.12e-01	92.8%	78.1%
3hwcA03	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.61	51.0	3.79e-01	91.6%	42.9%
3h36A00	1.10.10.400	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain	0.60	42.0	4.29e-01	79.5%	78.2%
1wi0A00	3.10.20.90	Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1	0.59	41.0	3.75e-01	74.7%	54.0%
2sasA00	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.58	47.0	3.68e-01	89.2%	46.5%
1f6fA00	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.58	42.0	3.27e-01	77.1%	89.6%
1vljA02	1.20.1090.10	Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain	0.57	45.0	3.38e-01	90.4%	33.6%
4ciuA02	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.56	47.0	3.64e-01	94.0%	87.0%
2ddhA04	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.56	43.0	3.73e-01	84.3%	70.5%
4gbmA00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.56	39.0	2.70e-01	72.3%	65.0%
6u0m401	3.30.1640.10	Alpha Beta › 2-Layer Sandwich › mini-chromosome maintenance (MCM) complex, chain A, domain 1 › mini-chromosome maintenance (MCM) complex, chain A, domain 1	0.55	38.0	3.46e-01	71.1%	62.4%
3buxB01	1.20.930.20	Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain	0.55	44.0	3.92e-01	91.6%	79.8%
1gaxA02	1.10.730.10	Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1	0.55	44.0	3.32e-01	91.6%	58.6%
1m56C02	1.20.120.80	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle	0.53	46.0	3.58e-01	100.0%	94.4%
3ooxA00	2.60.120.330	Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain	0.52	45.0	3.08e-01	97.6%	82.3%
2yz0A00	3.10.110.10	Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme	0.52	40.0	3.43e-01	84.3%	56.5%
1pwuA04	3.40.390.10	Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain)	0.52	44.0	3.24e-01	94.0%	55.2%

ECOD (41)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5027610	148.1.3.50 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid	0.85	59.0	5.92e-01	95.2%	70.6%
3971889	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.81	55.0	5.42e-01	92.8%	65.6%
4180021	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.80	64.0	6.02e-01	98.8%	71.0%
4940788	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.77	67.0	6.58e-01	96.4%	87.8%
3622337	148.1.3.17 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid	0.76	65.0	6.05e-01	96.4%	75.0%
5029473	148.1.3.17 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid	0.75	69.0	6.35e-01	100.0%	91.4%
3688793	148.1.3.42 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid	0.75	51.0	4.66e-01	94.0%	53.6%
3701562	148.1.3.178 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA	0.74	55.0	3.42e-01	96.4%	14.4%
3188710	148.1.3.212 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_13	0.74	61.0	5.62e-01	96.4%	69.5%
4020585	148.1.3.17 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid	0.73	65.0	6.20e-01	96.4%	84.2%
3988174	632.19.1.3 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542	0.67	54.0	5.40e-01	91.6%	85.9%
4629417	140.1.1.7 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2	0.66	48.0	4.05e-01	80.7%	44.8%
4941914	4070.1.1.2 ↗	alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50	0.65	57.0	4.38e-01	98.8%	71.8%
4019076	148.1.3.212 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_13	0.65	57.0	5.19e-01	97.6%	72.7%
3399202	140.1.1.14 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e	0.64	44.0	3.24e-01	84.3%	25.0%
4376234	4070.1.1.2 ↗	alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50	0.64	55.0	3.97e-01	97.6%	57.6%
5083874	140.1.1.14 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e	0.64	42.0	3.57e-01	79.5%	40.0%
3434261	148.1.3.26 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_9	0.63	56.0	4.58e-01	97.6%	87.3%
3669572	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.63	48.0	5.01e-01	84.3%	89.3%
4535655	140.1.1.4 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e,DALR_2	0.63	47.0	3.85e-01	80.7%	42.5%
3194523	148.1.3.212 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_13	0.62	56.0	4.99e-01	98.8%	72.2%
4259997	192.15.1.133 ↗	alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › NST1	0.62	50.0	4.55e-01	86.7%	74.5%
4033037	632.19.1.3 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542	0.62	48.0	5.08e-01	89.2%	100.0%
3917311	5057.1.1.1 ↗	alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb	0.62	44.0	3.73e-01	75.9%	44.6%
3405211	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.62	52.0	4.39e-01	92.8%	97.1%
3283581	191.1.1.54 ↗	alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_32	0.62	44.0	3.72e-01	75.9%	47.6%
2387858	136.1.1.3 ↗	alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › An_peroxidase	0.61	53.0	3.31e-01	98.8%	91.8%
3958333	2004.1.1.197 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_3	0.61	43.0	3.23e-01	73.5%	65.9%
3563670	3758.1.1.54 ↗	alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › ApoL	0.61	38.0	3.73e-01	92.8%	57.8%
3620312	5001.1.1.63 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srab	0.61	51.0	3.74e-01	92.8%	43.1%
4012827	219.1.1.0 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases	0.59	41.0	2.62e-01	71.1%	22.8%
3616017	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.59	45.0	4.40e-01	92.8%	74.7%
4943903	2004.1.1.186 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12	0.57	41.0	2.38e-01	74.7%	15.5%
3552234	148.1.3.19 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3	0.57	43.0	4.22e-01	92.8%	73.7%
4388543	140.1.1.7 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2	0.56	43.0	3.63e-01	84.3%	48.0%
4194678	632.7.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain	0.54	41.0	4.21e-01	90.4%	85.0%
3935477	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.53	38.0	4.05e-01	98.8%	92.9%
3479130	614.1.1.0 ↗	alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain	0.52	40.0	4.18e-01	83.1%	94.7%
3231843	198.1.1.0 ↗	alpha arrays › Saposin-like › Saposin-like › Saposin-like	0.52	35.0	3.66e-01	90.4%	76.0%
3520618	140.1.1.11 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1	0.52	44.0	3.17e-01	94.0%	36.3%
5056262	1134.1.2.0 ↗	alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Archaeal C-Ala helical domain	0.52	38.0	3.77e-01	78.3%	83.3%