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IMGVR_UViG_3300002120_000001-3300002120-C687J26616_1000000384
Arc-VirIMGVR_UViG_3300002120_000001-3300002120-C687J26616_1000000384
Identity
- Kingdom:
- archaea
Quality
71.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-67
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 42.0 | 4.30e-01 | 92.4% | 84.1% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 44.0 | 4.31e-01 | 90.9% | 78.1% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 42.0 | 4.23e-01 | 98.5% | 79.7% |
| 2efiA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 45.0 | 4.01e-01 | 95.5% | 62.0% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 41.0 | 4.15e-01 | 92.4% | 84.4% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 40.0 | 4.02e-01 | 92.4% | 83.3% |
| 2kdoA01 | 3.30.1250.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical 12.0 Kda Protein In Nam8-gar1 Intergenic Region; Chain: A; › Ribosome maturation protein SBDS, N-terminal domain | 0.52 | 39.0 | 3.53e-01 | 84.8% | 82.8% |
| 1fouA02 | 2.40.500.10 | Mainly Beta › Beta Barrel › Upper collar protein gp10 (connector protein) fold › Upper collar protein gp10 (connector protein) | 0.52 | 39.0 | 3.27e-01 | 86.4% | 68.2% |
| 3p34A02 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.52 | 43.0 | 3.87e-01 | 97.0% | 77.3% |
| 3dsoA00 | 2.40.10.300 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Copper resistance protein K | 0.51 | 38.0 | 3.85e-01 | 87.9% | 81.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3455086 | 650.1.1.7 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › Zn_ribbon_20 | 0.60 | 40.0 | 4.52e-01 | 84.8% | 100.0% |
| 3881123 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 45.0 | 4.15e-01 | 92.4% | 64.7% |
| 3228278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 42.0 | 4.29e-01 | 92.4% | 84.6% |
| 3850775 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.55 | 41.0 | 4.17e-01 | 92.4% | 84.6% |
| 4470603 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.54 | 43.0 | 3.29e-01 | 92.4% | 36.4% |
| 3736990 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 45.0 | 3.07e-01 | 97.0% | 56.9% |
| 3697945 | 4.1.1.312 ↗ | beta barrels › SH3 › SH3 › SH3 › Med13_N | 0.53 | 42.0 | 3.09e-01 | 92.4% | 66.8% |
| 3649741 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.53 | 39.0 | 3.80e-01 | 93.9% | 73.3% |
| 5036647 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.52 | 37.0 | 3.72e-01 | 98.5% | 74.3% |
| 3585538 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.52 | 42.0 | 3.73e-01 | 93.9% | 66.0% |
| 5060529 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.51 | 38.0 | 3.80e-01 | 83.3% | 77.1% |
| 4959767 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.51 | 38.0 | 3.89e-01 | 95.5% | 91.7% |