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IMGVR_UViG_3300002120_000127-3300002120-C687J26616_100027822
Arc-VirIMGVR_UViG_3300002120_000127-3300002120-C687J26616_100027822
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 374-515
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ifeA02 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.79 | 75.0 | 6.27e-01 | 100.0% | 87.7% |
| 1kcfB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.76 | 71.0 | 5.95e-01 | 100.0% | 78.1% |
| 3bzcA03 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.75 | 63.0 | 6.60e-01 | 100.0% | 96.9% |
| 7essA01 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.70 | 58.0 | 6.06e-01 | 99.3% | 93.2% |
| 5ul3A01 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.66 | 46.0 | 4.45e-01 | 71.1% | 79.5% |
| 2ychA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 59.0 | 5.80e-01 | 100.0% | 95.5% |
| 2f48A01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 44.0 | 3.48e-01 | 71.1% | 55.8% |
| 1efpB00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 47.0 | 3.91e-01 | 81.7% | 82.9% |
| 3hnoA01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 46.0 | 3.95e-01 | 81.0% | 95.9% |
| 2qdeA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.58 | 40.0 | 3.43e-01 | 70.4% | 85.4% |
| 1yqeA02 | 3.40.50.10700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like | 0.58 | 37.0 | 4.35e-01 | 100.0% | 94.8% |
| 4xfjB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 49.0 | 4.62e-01 | 92.3% | 98.3% |
| 3vylA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.56 | 46.0 | 3.65e-01 | 88.7% | 86.5% |
| 4ldaB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 40.0 | 4.17e-01 | 72.5% | 84.3% |
| 2pmqA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 42.0 | 3.60e-01 | 78.9% | 89.3% |
| 5e7qA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.55 | 47.0 | 3.43e-01 | 93.7% | 44.5% |
| 1q8iA03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 49.0 | 4.55e-01 | 100.0% | 97.8% |
| 1reqA02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.55 | 43.0 | 4.15e-01 | 100.0% | 72.0% |
| 3op2A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.54 | 39.0 | 3.36e-01 | 75.4% | 84.0% |
| 5c3mC01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 48.0 | 4.52e-01 | 95.1% | 98.2% |
| 2xdqB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.53 | 41.0 | 4.11e-01 | 99.3% | 78.2% |
| 4inaA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 43.0 | 3.85e-01 | 85.2% | 87.8% |
| 4u63A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 46.0 | 4.27e-01 | 91.5% | 94.3% |
| 3hs3A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 37.0 | 3.78e-01 | 72.5% | 97.8% |
| 1mdbA01 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 37.0 | 3.63e-01 | 78.2% | 65.8% |
| 1up7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 46.0 | 4.68e-01 | 95.1% | 97.1% |
| 4wnyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 42.0 | 4.37e-01 | 99.3% | 91.7% |
| 2xdqA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.52 | 40.0 | 4.11e-01 | 100.0% | 84.6% |
| 1hyeA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 45.0 | 4.52e-01 | 95.1% | 97.3% |
| 1u3dA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 43.0 | 4.16e-01 | 90.8% | 95.0% |
| 6n8eA04 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 46.0 | 3.86e-01 | 100.0% | 90.1% |
| 4nzpA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 43.0 | 4.35e-01 | 91.5% | 97.1% |
| 2rbgA00 | 3.40.50.11100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 40.0 | 4.28e-01 | 92.3% | 97.6% |
| 1hyhA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 44.0 | 4.51e-01 | 95.1% | 95.7% |
| 3bjsA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.50 | 42.0 | 3.49e-01 | 90.1% | 94.1% |
| 7d73E01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.50 | 46.0 | 3.97e-01 | 100.0% | 83.9% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5080207 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.91 | 87.0 | 7.57e-01 | 100.0% | 76.5% |
| 5002634 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.88 | 84.0 | 7.64e-01 | 100.0% | 80.6% |
| 4974990 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.85 | 81.0 | 7.43e-01 | 100.0% | 85.1% |
| 5083931 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.82 | 78.0 | 7.20e-01 | 100.0% | 85.7% |
| 4975081 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.79 | 74.0 | 7.19e-01 | 99.3% | 90.3% |
| 3734515 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.77 | 59.0 | 4.97e-01 | 78.9% | 93.3% |
| 4954544 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.77 | 71.0 | 6.42e-01 | 100.0% | 82.1% |
| 3927362 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.75 | 63.0 | 6.17e-01 | 100.0% | 81.9% |
| 4256383 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.74 | 59.0 | 5.81e-01 | 100.0% | 78.7% |
| 2623870 | 2484.1.1.44 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pox_A22 | 0.72 | 66.0 | 6.54e-01 | 100.0% | 94.6% |
| 3656197 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.71 | 60.0 | 5.49e-01 | 100.0% | 69.2% |
| 5048942 | 2484.1.1.39 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Fumble | 0.71 | 50.0 | 4.58e-01 | 71.8% | 99.4% |
| 3779469 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.70 | 59.0 | 5.55e-01 | 100.0% | 75.3% |
| 4610182 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.70 | 65.0 | 5.85e-01 | 100.0% | 78.9% |
| 4964957 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.69 | 50.0 | 5.49e-01 | 100.0% | 92.2% |
| 3387219 | 2484.6.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR › ExbD | 0.67 | 38.0 | 4.70e-01 | 97.9% | 87.8% |
| 3648289 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.62 | 54.0 | 3.67e-01 | 94.4% | 82.5% |
| 3223797 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.62 | 43.0 | 4.09e-01 | 70.4% | 65.5% |
| 4948361 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.61 | 42.0 | 4.52e-01 | 70.4% | 100.0% |
| 4371092 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.61 | 49.0 | 4.38e-01 | 85.2% | 94.5% |
| 3959556 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.60 | 43.0 | 3.45e-01 | 73.2% | 75.1% |
| 3519741 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.60 | 42.0 | 4.39e-01 | 71.1% | 98.5% |
| 3801524 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.59 | 44.0 | 3.75e-01 | 76.8% | 79.1% |
| 3998864 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.59 | 42.0 | 4.42e-01 | 73.2% | 96.9% |
| 3100590 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.59 | 46.0 | 4.07e-01 | 82.4% | 87.4% |
| 9800 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.58 | 46.0 | 4.23e-01 | 83.1% | 97.3% |
| 4938945 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.58 | 44.0 | 4.46e-01 | 99.3% | 78.6% |
| 4946723 | 7592.1.1.13 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csm6_6H | 0.57 | 45.0 | 4.45e-01 | 99.3% | 77.3% |
| 3713746 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.57 | 42.0 | 4.42e-01 | 97.2% | 85.6% |
| 3695570 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.56 | 48.0 | 3.42e-01 | 93.0% | 86.6% |
| 5057690 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.56 | 40.0 | 4.21e-01 | 99.3% | 80.8% |
| 5042282 | 2007.1.16.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn | 0.56 | 34.0 | 3.91e-01 | 100.0% | 81.9% |
| 4078594 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.56 | 48.0 | 4.44e-01 | 93.7% | 93.0% |
| 5027917 | 2484.1.1.101 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 | 0.56 | 47.0 | 3.99e-01 | 94.4% | 54.6% |
| 3715292 | 2007.1.4.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › DAGK_cat | 0.55 | 46.0 | 4.72e-01 | 100.0% | 94.1% |
| 4978698 | 7539.1.1.1 ↗ | a/b three-layered sandwiches › Creatininase › Creatininase › Creatininase › Creatininase | 0.54 | 49.0 | 4.05e-01 | 100.0% | 86.2% |
| 9164 | 2003.1.1.26 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Glyco_hydro_4 | 0.54 | 48.0 | 4.51e-01 | 95.1% | 97.0% |
| 4954489 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.54 | 48.0 | 3.91e-01 | 97.9% | 79.8% |
| 3980748 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.53 | 44.0 | 3.87e-01 | 89.4% | 78.6% |
| 4960833 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.53 | 47.0 | 3.94e-01 | 97.9% | 81.6% |
| 1282309 | 2007.1.2.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Bmp | 0.52 | 36.0 | 3.89e-01 | 70.4% | 95.1% |
| 3947020 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.52 | 37.0 | 3.77e-01 | 71.1% | 90.4% |
| 3680000 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.52 | 48.0 | 4.00e-01 | 100.0% | 75.1% |
| 3271258 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.52 | 47.0 | 4.10e-01 | 100.0% | 80.0% |
| 4942057 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.52 | 45.0 | 4.08e-01 | 95.1% | 96.9% |
| 5044302 | 7539.1.1.1 ↗ | a/b three-layered sandwiches › Creatininase › Creatininase › Creatininase › Creatininase | 0.52 | 46.0 | 3.93e-01 | 100.0% | 86.7% |
| 3512774 | 7590.1.1.6 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › ArgoMid | 0.51 | 41.0 | 3.90e-01 | 99.3% | 70.3% |
| 5077342 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.51 | 42.0 | 4.24e-01 | 86.6% | 98.6% |
| 4972365 | 7512.1.1.8 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 | 0.51 | 41.0 | 3.93e-01 | 94.4% | 73.9% |
| 1514641 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.51 | 43.0 | 3.88e-01 | 91.5% | 95.0% |
| 1174549 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.51 | 44.0 | 3.59e-01 | 93.0% | 95.3% |
| 4962099 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.51 | 42.0 | 3.41e-01 | 90.1% | 84.2% |
| 4947456 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.50 | 43.0 | 3.97e-01 | 92.3% | 90.6% |
D2
medium
residues 1-141_162-180
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.51 | 25.0 | 3.06e-01 | 78.1% | 69.6% |