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IMGVR_UViG_3300002123_000034-3300002123-C687J26634_1000024133

Arc-Vir

IMGVR_UViG_3300002123_000034-3300002123-C687J26634_1000024133

Quality

81.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 47-153
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05069.19 best Phage_tail_S 27.2 4.40e-06 91.6% 56.8%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bndA02 3.30.1240.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain 0.57 38.0 4.06e-01 100.0% 77.1%
3gwmA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.51 37.0 3.51e-01 100.0% 63.6%
2r6fA06 1.20.1580.10 Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain 0.50 42.0 3.90e-01 93.5% 97.8%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3462691 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.63 33.0 3.98e-01 97.2% 80.0%
3935327 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.52 20.0 2.76e-01 90.7% 66.0%
3962976 206.1.1.29 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF4135 0.51 40.0 2.60e-01 88.8% 64.5%