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IMGVR_UViG_3300002123_000073-3300002123-C687J26634_1000121817
Arc-VirIMGVR_UViG_3300002123_000073-3300002123-C687J26634_1000121817
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-11_80-144
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yhfA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 43.0 | 3.81e-01 | 85.5% | 50.0% |
| 2gu9A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 46.0 | 4.14e-01 | 85.5% | 58.3% |
| 2e7zA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.62 | 42.0 | 3.36e-01 | 71.1% | 87.0% |
| 3cpxA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.61 | 43.0 | 4.66e-01 | 73.7% | 100.0% |
| 1qwrA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 42.0 | 3.99e-01 | 84.2% | 60.7% |
| 1v70A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 44.0 | 3.95e-01 | 85.5% | 55.2% |
| 4rd7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 43.0 | 3.72e-01 | 85.5% | 47.9% |
| 1h0hA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.60 | 42.0 | 3.29e-01 | 75.0% | 75.6% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.59 | 40.0 | 4.23e-01 | 71.1% | 100.0% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.59 | 45.0 | 4.01e-01 | 82.9% | 73.9% |
| 4avrA00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.58 | 44.0 | 4.11e-01 | 80.3% | 100.0% |
| 2hyxA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 44.0 | 3.73e-01 | 82.9% | 99.2% |
| 3l2hA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 43.0 | 3.47e-01 | 85.5% | 40.8% |
| 6nwmA01 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.57 | 41.0 | 3.26e-01 | 85.5% | 36.8% |
| 4jcwA01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.57 | 44.0 | 3.97e-01 | 82.9% | 99.0% |
| 2napA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.57 | 40.0 | 3.53e-01 | 75.0% | 100.0% |
| 2iv2X04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.56 | 40.0 | 3.69e-01 | 75.0% | 100.0% |
| 1yzbA01 | 3.90.70.40 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.56 | 45.0 | 3.89e-01 | 89.5% | 82.3% |
| 6v55A01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.56 | 44.0 | 3.89e-01 | 85.5% | 61.6% |
| 2ki8A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.56 | 41.0 | 3.51e-01 | 78.9% | 88.0% |
| 2dpyA00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 42.0 | 2.64e-01 | 82.9% | 17.3% |
| 3ougA00 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.55 | 40.0 | 3.65e-01 | 78.9% | 82.1% |
| 7zvmA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 43.0 | 3.92e-01 | 100.0% | 63.7% |
| 5fq0A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 43.0 | 3.81e-01 | 85.5% | 70.0% |
| 3lwcA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 42.0 | 3.86e-01 | 85.5% | 73.8% |
| 3fjsC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 42.0 | 3.79e-01 | 85.5% | 69.2% |
| 2vpvA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 43.0 | 4.01e-01 | 100.0% | 70.2% |
| 2ozjA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 42.0 | 3.72e-01 | 100.0% | 58.7% |
| 4n2kA01 | 2.60.40.1860 | Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, N-terminal domain | 0.54 | 42.0 | 3.64e-01 | 85.5% | 78.2% |
| 1sfnA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 46.0 | 3.25e-01 | 97.4% | 88.2% |
| 2pfwA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 40.0 | 3.60e-01 | 100.0% | 56.8% |
| 3d82A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 42.0 | 3.79e-01 | 85.5% | 72.5% |
| 4f23A02 | 3.90.209.20 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain | 0.53 | 42.0 | 3.05e-01 | 88.2% | 72.1% |
| 3kq4B03 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.52 | 40.0 | 3.61e-01 | 85.5% | 65.2% |
| 1vj2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 41.0 | 3.60e-01 | 100.0% | 57.0% |
| 4e2gC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 41.0 | 3.50e-01 | 85.5% | 60.3% |
| 2qnkA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 44.0 | 2.96e-01 | 93.4% | 97.2% |
| 1sefA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 40.0 | 3.54e-01 | 100.0% | 56.3% |
| 3obaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 43.0 | 3.23e-01 | 96.1% | 77.5% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 43.0 | 4.07e-01 | 94.7% | 81.5% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4990903 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.63 | 43.0 | 3.94e-01 | 85.5% | 52.9% |
| 5040464 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 46.0 | 4.33e-01 | 84.2% | 100.0% |
| 4040376 | 1.1.2.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox | 0.58 | 46.0 | 3.86e-01 | 85.5% | 66.9% |
| 4992255 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.58 | 36.0 | 3.83e-01 | 96.1% | 72.3% |
| 4936740 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.57 | 38.0 | 3.99e-01 | 78.9% | 75.7% |
| 4649270 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 33.0 | 3.43e-01 | 100.0% | 61.4% |
| 4805066 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.56 | 44.0 | 3.94e-01 | 85.5% | 63.9% |
| 4015504 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.56 | 41.0 | 3.32e-01 | 85.5% | 38.7% |
| 4032200 | 10.12.1.63 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MPI_cupin_dom | 0.56 | 43.0 | 4.00e-01 | 100.0% | 65.3% |
| 4880519 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.56 | 43.0 | 3.76e-01 | 100.0% | 54.7% |
| 3781180 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.56 | 39.0 | 3.55e-01 | 75.0% | 100.0% |
| 5049516 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.55 | 40.0 | 3.40e-01 | 77.6% | 84.6% |
| 3412134 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.55 | 43.0 | 3.71e-01 | 85.5% | 91.1% |
| 3287407 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 44.0 | 4.10e-01 | 100.0% | 70.5% |
| 3284076 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.55 | 43.0 | 3.35e-01 | 85.5% | 46.7% |
| 3955052 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.54 | 41.0 | 3.70e-01 | 100.0% | 57.3% |
| 3423072 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.54 | 42.0 | 3.59e-01 | 85.5% | 90.8% |
| 5036934 | 75.1.1.4 ↗ | beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › Cyclophil_like | 0.54 | 42.0 | 3.61e-01 | 85.5% | 74.4% |
| 3507371 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.54 | 41.0 | 3.65e-01 | 85.5% | 63.3% |
| 4942318 | 3127.1.1.1 ↗ | beta sandwiches › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › DUF192 | 0.54 | 41.0 | 3.75e-01 | 82.9% | 61.0% |
| 5080536 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.54 | 42.0 | 3.90e-01 | 85.5% | 78.0% |
| 355456 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.54 | 42.0 | 3.79e-01 | 85.5% | 69.2% |
| 3474916 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.54 | 41.0 | 3.58e-01 | 85.5% | 56.8% |
| 4010358 | 10.12.1.32 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › EutQ | 0.54 | 42.0 | 3.45e-01 | 85.5% | 49.7% |
| 3941636 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.53 | 43.0 | 3.81e-01 | 100.0% | 60.0% |
| 4962210 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.53 | 41.0 | 3.72e-01 | 100.0% | 60.9% |
| 5004468 | 225.1.1.19 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › SACS | 0.53 | 43.0 | 3.25e-01 | 93.4% | 75.5% |
| 5051145 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 39.0 | 3.52e-01 | 100.0% | 57.3% |
| 3740727 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.52 | 37.0 | 3.60e-01 | 76.3% | 100.0% |
| 3935726 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.52 | 36.0 | 3.15e-01 | 72.4% | 89.5% |
| 4955697 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 41.0 | 3.75e-01 | 100.0% | 64.8% |
| 3587816 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 40.0 | 3.68e-01 | 100.0% | 62.9% |
| 3518673 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.51 | 40.0 | 3.51e-01 | 85.5% | 61.7% |
| 3186985 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 39.0 | 3.97e-01 | 82.9% | 96.0% |
| 3588940 | 10.32.1.260 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › YfhO | 0.51 | 44.0 | 3.44e-01 | 96.1% | 81.2% |
| 5063794 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.51 | 40.0 | 3.95e-01 | 94.7% | 82.5% |
| 3924067 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.51 | 38.0 | 3.35e-01 | 84.2% | 54.4% |
| 3605376 | 1.1.2.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 | 0.50 | 38.0 | 3.58e-01 | 82.9% | 100.0% |
D2
medium
residues 12-79
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7eebI01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.82 | 55.0 | 4.00e-01 | 83.8% | 27.8% |
| 2pjpA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 46.0 | 4.84e-01 | 73.5% | 67.2% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 46.0 | 5.09e-01 | 76.5% | 80.0% |
| 3f8mA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 44.0 | 4.53e-01 | 70.6% | 63.1% |
| 1qo0D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 46.0 | 5.41e-01 | 75.0% | 95.7% |
| 2f8lA01 | 1.10.150.470 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.69 | 41.0 | 3.91e-01 | 86.8% | 49.4% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 42.0 | 4.54e-01 | 73.5% | 73.2% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 46.0 | 4.90e-01 | 77.9% | 81.0% |
| 2jt1A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 45.0 | 4.51e-01 | 70.6% | 67.6% |
| 1b0uA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 53.0 | 3.54e-01 | 86.8% | 25.6% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 47.0 | 4.64e-01 | 79.4% | 69.9% |
| 6az6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 44.0 | 4.29e-01 | 76.5% | 62.7% |
| 3dv8A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 48.0 | 4.58e-01 | 83.8% | 67.9% |
| 2z99A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 44.0 | 4.09e-01 | 70.6% | 57.5% |
| 1j5yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 41.0 | 4.27e-01 | 70.6% | 68.8% |
| 2pmyA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.64 | 38.0 | 3.80e-01 | 76.5% | 54.8% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 42.0 | 4.38e-01 | 72.1% | 73.0% |
| 2a6hF01 | 1.20.120.1810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 55.0 | 4.06e-01 | 97.1% | 97.3% |
| 1gkuB08 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.64 | 49.0 | 4.09e-01 | 83.8% | 89.9% |
| 4cgyA04 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.63 | 48.0 | 3.89e-01 | 80.9% | 87.2% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 42.0 | 4.22e-01 | 79.4% | 67.1% |
| 4lrvF00 | 1.10.1220.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › DNA sulphur modification protein DndE | 0.61 | 47.0 | 4.10e-01 | 83.8% | 97.1% |
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.60 | 43.0 | 3.69e-01 | 83.8% | 46.0% |
| 7x4eA01 | 1.10.1220.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › DNA sulphur modification protein DndE | 0.60 | 48.0 | 4.19e-01 | 88.2% | 97.2% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 45.0 | 3.53e-01 | 79.4% | 39.3% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 45.0 | 4.16e-01 | 79.4% | 68.2% |
| 4i0wB01 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.59 | 51.0 | 3.34e-01 | 100.0% | 54.4% |
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 44.0 | 3.78e-01 | 82.4% | 49.5% |
| 7cluA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 45.0 | 4.13e-01 | 82.4% | 64.0% |
| 2jgpA03 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.58 | 44.0 | 3.09e-01 | 83.8% | 78.5% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 44.0 | 3.84e-01 | 80.9% | 58.0% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 42.0 | 3.91e-01 | 79.4% | 65.2% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.54 | 45.0 | 4.19e-01 | 94.1% | 95.5% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 39.0 | 3.62e-01 | 76.5% | 63.2% |
| 3cexA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.52 | 36.0 | 2.83e-01 | 75.0% | 79.4% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5036290 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.71 | 51.0 | 5.59e-01 | 85.3% | 94.5% |
| 3495189 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.69 | 51.0 | 3.76e-01 | 85.3% | 28.9% |
| 3634549 | 108.1.1.20 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_like | 0.69 | 53.0 | 4.85e-01 | 83.8% | 72.2% |
| 3688032 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.67 | 46.0 | 2.99e-01 | 70.6% | 76.8% |
| 3850676 | 153.1.1.0 ↗ | extended segments › Transducin (heterotrimeric G protein), gamma chain › Transducin (heterotrimeric G protein), gamma chain › Transducin (heterotrimeric G protein), gamma chain | 0.66 | 47.0 | 3.51e-01 | 73.5% | 33.3% |
| 3246334 | 101.1.2.12 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEP | 0.66 | 45.0 | 4.07e-01 | 72.1% | 55.8% |
| 4946147 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 47.0 | 4.67e-01 | 77.9% | 72.9% |
| 4970991 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 50.0 | 4.02e-01 | 82.4% | 47.2% |
| 4976235 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 49.0 | 4.28e-01 | 80.9% | 58.0% |
| 3587181 | 101.1.2.66 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mga | 0.64 | 46.0 | 4.55e-01 | 75.0% | 77.1% |
| 4971409 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 49.0 | 4.34e-01 | 82.4% | 61.1% |
| 3250084 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 45.0 | 4.09e-01 | 76.5% | 54.7% |
| 4971669 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 49.0 | 3.74e-01 | 82.4% | 40.7% |
| 4079854 | 101.1.2.530 ↗ | alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 | 0.62 | 47.0 | 4.61e-01 | 82.4% | 73.3% |
| 5044549 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 48.0 | 4.31e-01 | 83.8% | 63.2% |
| 4962664 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.62 | 48.0 | 3.83e-01 | 83.8% | 61.5% |
| 5005794 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.62 | 47.0 | 3.76e-01 | 82.4% | 59.3% |
| 4296281 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.61 | 48.0 | 3.21e-01 | 85.3% | 23.7% |
| 5022523 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.61 | 46.0 | 4.10e-01 | 83.8% | 56.8% |
| 3587362 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.60 | 47.0 | 3.70e-01 | 83.8% | 42.4% |
| 3612108 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.60 | 46.0 | 4.56e-01 | 82.4% | 81.4% |
| 4421408 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.60 | 45.0 | 2.78e-01 | 80.9% | 13.4% |
| 1833430 | 2499.1.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 | 0.59 | 51.0 | 3.13e-01 | 100.0% | 67.9% |
| 5057033 | 101.1.2.751 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6293_C | 0.58 | 45.0 | 4.00e-01 | 82.4% | 62.1% |
| 3398316 | 101.1.2.248 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF4777 | 0.58 | 42.0 | 3.91e-01 | 76.5% | 61.2% |
| 3470646 | 376.1.3.14 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-CRD | 0.56 | 46.0 | 3.66e-01 | 92.6% | 55.9% |
| 4371931 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.55 | 40.0 | 2.95e-01 | 77.9% | 32.4% |
| 5070513 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.52 | 40.0 | 3.82e-01 | 83.8% | 78.8% |