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IMGVR_UViG_3300002123_000410-3300002123-C687J26634_100016378
Arc-VirIMGVR_UViG_3300002123_000410-3300002123-C687J26634_100016378
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-68
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.63 | 47.0 | 3.49e-01 | 81.5% | 90.1% |
| 4ebgA00 | 3.10.450.560 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 46.0 | 4.11e-01 | 100.0% | 55.7% |
| 3lbfA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 34.0 | 2.41e-01 | 100.0% | 17.9% |
| 6j4nC01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 46.0 | 3.01e-01 | 100.0% | 80.9% |
| 1qlbA04 | 3.10.20.820 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 33.0 | 2.94e-01 | 100.0% | 40.4% |
| 2opjA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 43.0 | 3.96e-01 | 86.2% | 81.4% |
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.53 | 29.0 | 3.42e-01 | 72.3% | 89.2% |
| 1lc0A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 44.0 | 3.50e-01 | 100.0% | 61.2% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 28.0 | 2.52e-01 | 87.7% | 31.4% |
| 3mdqA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 47.0 | 3.77e-01 | 100.0% | 85.4% |
| 1nqzA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 42.0 | 3.26e-01 | 100.0% | 86.5% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3962088 | 218.1.1.4 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_like_N | 0.63 | 42.0 | 3.95e-01 | 73.8% | 57.0% |
| 3282804 | 218.1.1.4 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_like_N | 0.63 | 41.0 | 4.30e-01 | 72.3% | 73.3% |
| 4032294 | 3389.1.1.1 ↗ | a+b two layers › hypothetical protein SAV0303 › hypothetical protein SAV0303 › hypothetical protein SAV0303 › DUF4467 | 0.59 | 44.0 | 3.93e-01 | 100.0% | 54.1% |
| 3467154 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.59 | 40.0 | 2.92e-01 | 70.8% | 28.6% |
| 4338613 | 4180.1.1.1 ↗ | a+b two layers › SpoVG-like › SpoVG-like › SpoVG-like › SpoVG | 0.58 | 50.0 | 4.67e-01 | 100.0% | 96.5% |
| 5038625 | 5.1.4.87 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD | 0.57 | 42.0 | 2.64e-01 | 84.6% | 81.3% |
| 3705073 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 47.0 | 4.16e-01 | 100.0% | 93.0% |
| 3239884 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.54 | 38.0 | 3.32e-01 | 75.4% | 61.0% |
| 1177166 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 31.0 | 3.54e-01 | 75.4% | 79.5% |
| 3997517 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 40.0 | 3.90e-01 | 98.5% | 74.3% |
| 3658860 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 41.0 | 2.81e-01 | 96.9% | 24.5% |
| 3670182 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.53 | 37.0 | 3.05e-01 | 80.0% | 38.4% |
| 4001211 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 36.0 | 3.50e-01 | 100.0% | 61.5% |
| 3197575 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.53 | 35.0 | 3.23e-01 | 80.0% | 50.0% |
| 4197404 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.52 | 37.0 | 2.87e-01 | 73.8% | 87.9% |
| 3682351 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.52 | 36.0 | 2.64e-01 | 98.5% | 25.9% |
| 3931383 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.51 | 44.0 | 3.57e-01 | 98.5% | 60.8% |
| 3216674 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.51 | 39.0 | 3.36e-01 | 87.7% | 68.7% |
| 3308710 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.50 | 31.0 | 3.07e-01 | 95.4% | 55.7% |
| 3467905 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 33.0 | 3.54e-01 | 84.6% | 81.8% |