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IMGVR_UViG_3300002149_000090-3300002149-C687J26657_100018181
Arc-VirIMGVR_UViG_3300002149_000090-3300002149-C687J26657_100018181
Identity
- Kingdom:
- archaea
Quality
71.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-58
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2otnB01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.64 | 39.0 | 2.81e-01 | 93.9% | 20.5% |
| 2dtcA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 43.0 | 3.33e-01 | 100.0% | 31.0% |
| 3c7fA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 41.0 | 2.49e-01 | 77.6% | 31.0% |
| 1xb2B03 | 3.30.479.20 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Elongation factor Ts, dimerisation domain | 0.56 | 44.0 | 3.82e-01 | 100.0% | 94.7% |
| 6fndA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 34.0 | 2.35e-01 | 95.9% | 16.1% |
| 1a1xA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.55 | 40.0 | 3.19e-01 | 79.6% | 81.1% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 36.0 | 2.98e-01 | 100.0% | 37.6% |
| 6i8wB01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 47.0 | 2.89e-01 | 100.0% | 21.2% |
| 4inzA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 47.0 | 2.92e-01 | 100.0% | 22.0% |
| 2gaiA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.53 | 42.0 | 3.39e-01 | 100.0% | 74.8% |
| 4khbC00 | 2.30.29.210 | Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p | 0.52 | 38.0 | 3.04e-01 | 79.6% | 50.9% |
| 4c47A01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.52 | 39.0 | 2.99e-01 | 81.6% | 73.0% |
| 3kdaA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 46.0 | 2.83e-01 | 100.0% | 21.8% |
| 6vp6A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 42.0 | 3.63e-01 | 95.9% | 69.9% |
| 3fnbA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 42.0 | 2.79e-01 | 100.0% | 28.1% |
| 4feiA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 38.0 | 3.02e-01 | 81.6% | 53.9% |
| 4hikA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 42.0 | 3.18e-01 | 100.0% | 79.0% |
| 1k3sA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 44.0 | 3.45e-01 | 100.0% | 53.7% |
| 1rerA01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.50 | 40.0 | 3.18e-01 | 100.0% | 68.3% |
| 4ok4A02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.50 | 42.0 | 2.58e-01 | 100.0% | 18.8% |
| 2ijaA00 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.50 | 41.0 | 2.55e-01 | 100.0% | 15.4% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4356087 | 230.4.1.1 ↗ | a+b two layers › T-fold › ApbE-like › ApbE-like › ApbE | 0.61 | 49.0 | 3.44e-01 | 98.0% | 94.6% |
| 5015003 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.60 | 44.0 | 3.47e-01 | 100.0% | 39.0% |
| 5049980 | 7573.1.1.0 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like | 0.59 | 38.0 | 2.55e-01 | 100.0% | 16.0% |
| 3598156 | 230.4.1.0 ↗ | a+b two layers › T-fold › ApbE-like › ApbE-like | 0.58 | 47.0 | 3.28e-01 | 98.0% | 93.8% |
| 5065874 | 230.4.1.1 ↗ | a+b two layers › T-fold › ApbE-like › ApbE-like › ApbE | 0.57 | 46.0 | 3.24e-01 | 98.0% | 96.1% |
| 3190456 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.56 | 48.0 | 3.10e-01 | 100.0% | 27.7% |
| 3230080 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.56 | 41.0 | 2.54e-01 | 85.7% | 96.2% |
| 4989659 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.56 | 45.0 | 3.50e-01 | 100.0% | 39.2% |
| 3736378 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.54 | 48.0 | 2.77e-01 | 100.0% | 11.8% |
| 3380828 | 5.1.3.131 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Det1 | 0.53 | 47.0 | 2.72e-01 | 100.0% | 12.0% |
| 5048409 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.53 | 45.0 | 3.28e-01 | 100.0% | 51.7% |
| 4973784 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.52 | 45.0 | 2.67e-01 | 100.0% | 19.8% |
| 3613385 | 220.1.1.21 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SPT16 | 0.52 | 37.0 | 2.85e-01 | 77.6% | 45.6% |
| 3575485 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 42.0 | 3.30e-01 | 93.9% | 47.3% |
| 4982179 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.51 | 35.0 | 2.88e-01 | 73.5% | 98.1% |
| 2896191 | 5.1.5.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ,PQQ_2 | 0.51 | 36.0 | 2.12e-01 | 81.6% | 29.1% |
| 3784765 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 40.0 | 2.41e-01 | 95.9% | 11.1% |
| 3279465 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.51 | 37.0 | 2.82e-01 | 91.8% | 97.6% |
| 3967685 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.51 | 43.0 | 3.09e-01 | 100.0% | 50.3% |
| 4973153 | 304.103.1.5 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › TM1586_NiRdase | 0.50 | 44.0 | 3.58e-01 | 100.0% | 78.9% |
D2
high
residues 627-681
D3
medium
residues 85-109_269-431_486-541_560-580
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.52 | 26.0 | 3.62e-01 | 98.5% | 98.4% |
| 4of0A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 19.0 | 2.87e-01 | 78.1% | 74.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3409988 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 17.0 | 2.76e-01 | 81.9% | 66.4% |
| 3293359 | 10.32.1.33 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CIA30 | 0.52 | 37.0 | 4.23e-01 | 99.2% | 94.1% |
| 4928076 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.50 | 19.0 | 3.07e-01 | 95.5% | 97.6% |
D4
medium
residues 110-237
Domain cluster:
rep: ON189047.1__URA07152.1__Mallos_BL60044__00044__D4-113
CATH (2)
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3528795 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.80 | 29.0 | 4.95e-01 | 85.9% | 97.8% |
| 4024148 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.61 | 17.0 | 3.25e-01 | 73.4% | 85.7% |
| 4512216 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 23.0 | 3.55e-01 | 75.8% | 92.0% |
| 4955635 | 375.1.1.63 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular | 0.56 | 25.0 | 3.46e-01 | 78.9% | 84.4% |
D5
medium
residues 432-485
Domain cluster:
representative
D6
medium
residues 581-621
Domain cluster:
representative