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IMGVR_UViG_3300002168_000159-3300002168-JGI24712J26585_100265249

Arc-Vir

IMGVR_UViG_3300002168_000159-3300002168-JGI24712J26585_100265249

Identity

Kingdom:
archaea

Quality

58.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 181-202_204-259
PDB
D2 medium residues 1-47_81-106
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4981172 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 46.0 4.46e-01 71.2% 96.2%
D3 medium residues 48-80_107-144
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kvzA00 3.10.20.320 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Putative peptidoglycan bound protein (lpxtg motif) 0.60 44.0 4.15e-01 78.9% 82.4%
3ltoA01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.53 43.0 3.29e-01 91.5% 54.4%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4960936 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.82 60.0 5.76e-01 76.1% 100.0%
119354 11.1.4.21 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF3869 0.80 61.0 5.66e-01 80.3% 97.7%
4960446 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.78 61.0 5.32e-01 84.5% 98.1%
146209 11.1.4.21 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF3869 0.70 57.0 5.40e-01 87.3% 97.6%
3296275 3121.1.1.1 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA 0.56 40.0 3.88e-01 78.9% 100.0%