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IMGVR_UViG_3300002171_000033-3300002171-JGI24732J26686_100044418
Arc-VirIMGVR_UViG_3300002171_000033-3300002171-JGI24732J26686_100044418
Identity
- Kingdom:
- archaea
Quality
82.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-72
Domain cluster:
representative
CATH (77)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bbyA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 65.0 | 6.53e-01 | 100.0% | 88.4% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 66.0 | 5.78e-01 | 100.0% | 67.6% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 62.0 | 4.97e-01 | 100.0% | 46.4% |
| 3cjnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 63.0 | 4.96e-01 | 100.0% | 45.2% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 64.0 | 4.84e-01 | 100.0% | 40.5% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 61.0 | 5.54e-01 | 100.0% | 68.8% |
| 2zkzC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 61.0 | 5.72e-01 | 100.0% | 74.7% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 64.0 | 5.84e-01 | 100.0% | 78.3% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 63.0 | 4.83e-01 | 100.0% | 43.8% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 61.0 | 5.54e-01 | 100.0% | 70.2% |
| 1r7jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 58.0 | 5.35e-01 | 100.0% | 68.9% |
| 6pcoC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 62.0 | 5.04e-01 | 100.0% | 51.5% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 63.0 | 5.57e-01 | 100.0% | 69.0% |
| 1pp8O00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 61.0 | 5.54e-01 | 100.0% | 84.5% |
| 5hs7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 61.0 | 5.50e-01 | 100.0% | 69.4% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 61.0 | 5.39e-01 | 100.0% | 68.3% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 60.0 | 5.25e-01 | 100.0% | 68.6% |
| 2ia2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 54.0 | 5.52e-01 | 100.0% | 91.2% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 59.0 | 5.09e-01 | 100.0% | 64.3% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 58.0 | 5.12e-01 | 98.6% | 74.8% |
| 3qphA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 53.0 | 4.74e-01 | 98.6% | 61.9% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 58.0 | 5.12e-01 | 100.0% | 70.5% |
| 1p4xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 57.0 | 4.74e-01 | 100.0% | 55.1% |
| 3mq0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 51.0 | 5.02e-01 | 100.0% | 79.2% |
| 3l4gC03 | 1.10.10.2330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.66 | 47.0 | 5.13e-01 | 89.9% | 100.0% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 53.0 | 5.25e-01 | 94.2% | 89.3% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 53.0 | 4.71e-01 | 100.0% | 63.5% |
| 2kloA00 | 1.10.10.1420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain | 0.64 | 55.0 | 4.46e-01 | 100.0% | 52.9% |
| 2ab5A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.64 | 54.0 | 4.48e-01 | 100.0% | 59.0% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.63 | 55.0 | 4.86e-01 | 100.0% | 74.8% |
| 2fgcA03 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.63 | 42.0 | 4.07e-01 | 75.4% | 61.8% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.63 | 55.0 | 4.98e-01 | 100.0% | 86.3% |
| 3l4gB03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.63 | 45.0 | 4.42e-01 | 75.4% | 73.0% |
| 6u9hF02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.63 | 42.0 | 4.08e-01 | 75.4% | 62.3% |
| 2bf3B00 | 3.90.56.10 | Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › Monooxygenase component MmoB/DmpM | 0.62 | 51.0 | 4.77e-01 | 91.3% | 87.5% |
| 1y6uA01 | 3.90.105.50 | Alpha Beta › Alpha-Beta Complex › Molybdopterin biosynthesis moea protein, domain 2 › | 0.61 | 39.0 | 4.51e-01 | 84.1% | 91.8% |
| 1e3mA01 | 3.40.1170.10 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I | 0.61 | 45.0 | 3.77e-01 | 97.1% | 44.7% |
| 3ajdA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.61 | 41.0 | 4.28e-01 | 79.7% | 80.0% |
| 2v1nA01 | 1.10.10.2030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain | 0.61 | 52.0 | 4.66e-01 | 100.0% | 76.2% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.59 | 41.0 | 4.15e-01 | 75.4% | 70.4% |
| 2gqfA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 47.0 | 3.33e-01 | 92.8% | 41.8% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.58 | 43.0 | 4.37e-01 | 78.3% | 98.5% |
| 1s7hA02 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 41.0 | 3.93e-01 | 75.4% | 67.1% |
| 2v0cA03 | 2.30.210.10 | Mainly Beta › Roll › Leucyl-tRNA synthetase, domain 3 › Leucyl-tRNA synthetase, domain 3 | 0.56 | 38.0 | 4.07e-01 | 71.0% | 100.0% |
| 5ktaA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 49.0 | 3.59e-01 | 95.7% | 58.4% |
| 2p5kA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 44.0 | 4.51e-01 | 88.4% | 98.4% |
| 4xpkA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 46.0 | 3.64e-01 | 89.9% | 59.6% |
| 1bccB01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.56 | 47.0 | 3.31e-01 | 92.8% | 67.6% |
| 1lfpA03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.55 | 39.0 | 3.85e-01 | 78.3% | 69.9% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.55 | 47.0 | 4.12e-01 | 97.1% | 78.7% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.55 | 45.0 | 4.56e-01 | 89.9% | 92.5% |
| 2w01B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.55 | 47.0 | 3.44e-01 | 97.1% | 64.0% |
| 2oh1C00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 43.0 | 3.29e-01 | 87.0% | 92.4% |
| 5i2cB01 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.54 | 46.0 | 3.63e-01 | 95.7% | 87.0% |
| 7npaA02 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 44.0 | 4.18e-01 | 92.8% | 76.5% |
| 1rzmA01 | 3.30.70.1140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 | 0.54 | 36.0 | 3.52e-01 | 72.5% | 60.0% |
| 1lxnA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 3.45e-01 | 75.4% | 58.2% |
| 4erdA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 39.0 | 3.47e-01 | 81.2% | 55.6% |
| 8k1fC01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 42.0 | 3.10e-01 | 88.4% | 36.7% |
| 2q4aA00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.53 | 43.0 | 2.79e-01 | 91.3% | 74.1% |
| 1xkpC00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 42.0 | 3.49e-01 | 88.4% | 69.0% |
| 3vlaA02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.52 | 36.0 | 2.69e-01 | 75.4% | 89.9% |
| 1whvA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 38.0 | 3.45e-01 | 79.7% | 55.0% |
| 3ofgB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 37.0 | 3.52e-01 | 76.8% | 79.3% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 37.0 | 3.55e-01 | 76.8% | 65.9% |
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.52 | 39.0 | 3.35e-01 | 82.6% | 63.6% |
| 3zieD00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.52 | 42.0 | 3.99e-01 | 92.8% | 75.6% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.52 | 36.0 | 3.56e-01 | 75.4% | 72.7% |
| 2o0bA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.52 | 42.0 | 3.07e-01 | 94.2% | 94.0% |
| 1dctA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 36.0 | 2.86e-01 | 78.3% | 84.4% |
| 6swc801 | 3.30.30.170 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.51 | 40.0 | 3.52e-01 | 91.3% | 56.0% |
| 2gqcA01 | 3.30.70.2080 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 35.0 | 3.73e-01 | 75.4% | 91.1% |
| 1rwhA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.50 | 43.0 | 3.67e-01 | 95.7% | 75.4% |
| 3ucsA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.50 | 34.0 | 3.15e-01 | 76.8% | 50.5% |
| 4avaA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 42.0 | 3.16e-01 | 95.7% | 55.7% |
| 1ka8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 43.0 | 3.86e-01 | 100.0% | 89.0% |
| 3r5gA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.50 | 43.0 | 3.18e-01 | 100.0% | 62.1% |
ECOD (92)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2646 | 101.1.2.35 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIF_beta | 0.79 | 64.0 | 6.47e-01 | 100.0% | 88.4% |
| 4968723 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 65.0 | 5.36e-01 | 100.0% | 51.7% |
| 5034307 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 63.0 | 4.36e-01 | 100.0% | 28.0% |
| 5042411 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.76 | 65.0 | 6.09e-01 | 100.0% | 77.6% |
| 4929990 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 60.0 | 5.34e-01 | 100.0% | 61.0% |
| 3390367 | 101.1.2.122 ↗ | alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K | 0.75 | 57.0 | 6.07e-01 | 95.7% | 93.3% |
| 4983426 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 66.0 | 6.29e-01 | 100.0% | 85.0% |
| 3471467 | 101.1.2.169 ↗ | alpha arrays › HTH › HTH › winged helix domain › PheRS_DBD3 | 0.75 | 58.0 | 5.10e-01 | 100.0% | 56.2% |
| 3711450 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.74 | 63.0 | 6.02e-01 | 100.0% | 81.2% |
| 3493123 | 101.1.1.321 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PheRS_DBD3 | 0.74 | 58.0 | 5.07e-01 | 100.0% | 56.2% |
| 3925400 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 55.0 | 5.51e-01 | 91.3% | 78.6% |
| 5051539 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.74 | 58.0 | 4.92e-01 | 100.0% | 52.2% |
| 3718665 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 64.0 | 6.06e-01 | 100.0% | 89.4% |
| 3282605 | 101.1.2.508 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25872 | 0.73 | 62.0 | 5.94e-01 | 100.0% | 82.5% |
| 5006536 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.72 | 62.0 | 5.73e-01 | 100.0% | 74.4% |
| 4933456 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.72 | 57.0 | 5.45e-01 | 100.0% | 75.0% |
| 2671 | 101.1.2.126 ↗ | alpha arrays › HTH › HTH › winged helix domain › IBD | 0.72 | 62.0 | 5.34e-01 | 100.0% | 73.7% |
| 3942501 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 63.0 | 5.80e-01 | 100.0% | 86.7% |
| 4966085 | 101.1.2.385 ↗ | alpha arrays › HTH › HTH › winged helix domain › HRQ1_WHD | 0.72 | 56.0 | 5.49e-01 | 100.0% | 78.7% |
| 4968401 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 52.0 | 5.35e-01 | 89.9% | 83.1% |
| 3919567 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.71 | 64.0 | 5.72e-01 | 100.0% | 85.3% |
| 3824278 | 101.1.2.132 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF3591 | 0.71 | 63.0 | 5.88e-01 | 100.0% | 85.9% |
| 4946708 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 52.0 | 4.33e-01 | 89.9% | 44.0% |
| 5001357 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 63.0 | 5.56e-01 | 100.0% | 84.0% |
| 3305572 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.70 | 61.0 | 3.94e-01 | 100.0% | 20.9% |
| 3295884 | 101.1.2.132 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF3591 | 0.70 | 61.0 | 5.75e-01 | 100.0% | 83.5% |
| 3445779 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.70 | 60.0 | 5.03e-01 | 100.0% | 56.0% |
| 2388794 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.70 | 57.0 | 4.64e-01 | 100.0% | 47.1% |
| 3379132 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.69 | 59.0 | 3.80e-01 | 100.0% | 20.0% |
| 3364025 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.69 | 59.0 | 3.87e-01 | 100.0% | 22.0% |
| 5059445 | 101.1.2.751 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6293_C | 0.69 | 60.0 | 5.50e-01 | 100.0% | 93.5% |
| 3825121 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 60.0 | 5.74e-01 | 100.0% | 85.0% |
| 3831895 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.67 | 59.0 | 3.95e-01 | 100.0% | 31.3% |
| 3827338 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 46.0 | 5.14e-01 | 82.6% | 100.0% |
| 3273469 | 101.1.2.281 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tfb2 | 0.67 | 57.0 | 5.44e-01 | 100.0% | 81.9% |
| 5075143 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.67 | 59.0 | 4.24e-01 | 100.0% | 43.4% |
| 3978692 | 101.1.9.143 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM | 0.66 | 54.0 | 4.22e-01 | 89.9% | 69.3% |
| 3405664 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 55.0 | 5.37e-01 | 98.6% | 85.3% |
| 3654295 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 53.0 | 4.97e-01 | 98.6% | 71.6% |
| 3405902 | 101.1.2.177 ↗ | alpha arrays › HTH › HTH › winged helix domain › MARF1_LOTUS | 0.65 | 55.0 | 5.33e-01 | 100.0% | 85.0% |
| 3169051 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 52.0 | 4.70e-01 | 92.8% | 63.2% |
| 5064533 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 54.0 | 5.46e-01 | 97.1% | 92.9% |
| 4031731 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 51.0 | 5.05e-01 | 89.9% | 92.0% |
| 3251044 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.65 | 56.0 | 4.40e-01 | 100.0% | 48.7% |
| 3960541 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.65 | 46.0 | 4.40e-01 | 75.4% | 66.3% |
| 3249236 | 4207.1.2.93 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › RNA12 | 0.64 | 55.0 | 3.95e-01 | 100.0% | 32.6% |
| 4188749 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.63 | 54.0 | 5.17e-01 | 100.0% | 83.7% |
| 5048315 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 46.0 | 3.86e-01 | 91.3% | 42.3% |
| 4979405 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 46.0 | 4.86e-01 | 88.4% | 90.0% |
| 3304698 | 320.4.1.0 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain | 0.63 | 54.0 | 4.49e-01 | 100.0% | 60.0% |
| 3675645 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 50.0 | 4.26e-01 | 88.4% | 61.7% |
| 3738415 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.62 | 42.0 | 3.93e-01 | 76.8% | 56.5% |
| 3946974 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.62 | 43.0 | 3.85e-01 | 81.2% | 48.6% |
| 3171307 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.62 | 48.0 | 4.08e-01 | 85.5% | 54.8% |
| 3925501 | 101.1.2.122 ↗ | alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K | 0.61 | 46.0 | 4.17e-01 | 97.1% | 58.0% |
| 5036602 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.61 | 52.0 | 4.96e-01 | 100.0% | 92.9% |
| 3385701 | 101.1.9.95 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF3972 | 0.61 | 40.0 | 4.35e-01 | 75.4% | 87.3% |
| 3840108 | 101.1.9.95 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF3972 | 0.60 | 43.0 | 4.50e-01 | 75.4% | 86.7% |
| 4020561 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.60 | 47.0 | 4.17e-01 | 85.5% | 63.0% |
| 3289439 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.60 | 41.0 | 4.47e-01 | 79.7% | 92.7% |
| 3281621 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.60 | 42.0 | 4.52e-01 | 75.4% | 96.4% |
| 4937536 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 50.0 | 4.85e-01 | 100.0% | 86.3% |
| 5031915 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.59 | 50.0 | 4.72e-01 | 100.0% | 82.4% |
| 4461165 | 101.1.2.773 ↗ | alpha arrays › HTH › HTH › winged helix domain › YaaC | 0.58 | 48.0 | 4.54e-01 | 95.7% | 76.5% |
| 3304324 | 101.1.2.106 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tam41_Mmp37 | 0.58 | 49.0 | 4.07e-01 | 100.0% | 71.9% |
| 2323725 | 375.14.2.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS2) › Leucyl-specific | 0.58 | 40.0 | 4.19e-01 | 72.5% | 98.3% |
| 4957075 | 101.1.9.134 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF2067 | 0.58 | 45.0 | 4.00e-01 | 87.0% | 81.0% |
| 3651874 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.58 | 47.0 | 4.17e-01 | 89.9% | 63.0% |
| 3885541 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.58 | 40.0 | 4.15e-01 | 73.9% | 80.0% |
| 2168161 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.58 | 40.0 | 4.28e-01 | 78.3% | 89.5% |
| 3986782 | 304.37.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 › NIR_SIR_ferr | 0.57 | 44.0 | 3.38e-01 | 87.0% | 35.2% |
| 4334333 | 101.1.9.1 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR,MerR-DNA-bind | 0.57 | 43.0 | 3.51e-01 | 84.1% | 60.0% |
| 4435772 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.57 | 48.0 | 4.08e-01 | 97.1% | 79.7% |
| 3951460 | 101.30.1.3 ↗ | alpha arrays › HTH › Rv2175c › Rv2175c › Rv2175c_wHTH | 0.57 | 40.0 | 3.76e-01 | 76.8% | 68.9% |
| 2485951 | 375.14.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Leucyl-specific | 0.56 | 38.0 | 4.02e-01 | 71.0% | 98.3% |
| 4992437 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.56 | 39.0 | 4.05e-01 | 76.8% | 85.0% |
| 3378382 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 47.0 | 3.87e-01 | 100.0% | 55.7% |
| 3901409 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.56 | 40.0 | 3.69e-01 | 75.4% | 57.8% |
| 3987638 | 304.48.1.49 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_GdpP | 0.56 | 40.0 | 3.16e-01 | 76.8% | 44.7% |
| 4375315 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.56 | 38.0 | 4.22e-01 | 79.7% | 100.0% |
| 4579829 | 304.48.1.49 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_GdpP | 0.56 | 40.0 | 3.17e-01 | 76.8% | 44.7% |
| 5082561 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.55 | 37.0 | 4.06e-01 | 84.1% | 96.0% |
| 3290892 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.55 | 38.0 | 3.36e-01 | 72.5% | 47.6% |
| 4994568 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.55 | 39.0 | 4.19e-01 | 79.7% | 96.4% |
| 4420911 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.55 | 42.0 | 3.42e-01 | 84.1% | 51.1% |
| 4979282 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.54 | 47.0 | 3.49e-01 | 97.1% | 60.0% |
| 5070666 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.54 | 38.0 | 4.05e-01 | 81.2% | 94.5% |
| 4372180 | 304.48.1.49 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_GdpP | 0.53 | 37.0 | 2.98e-01 | 75.4% | 44.0% |
| 4101677 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.53 | 39.0 | 3.23e-01 | 81.2% | 54.8% |
| 4933561 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.52 | 38.0 | 4.06e-01 | 78.3% | 100.0% |
| 4476428 | 304.20.1.0 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0.51 | 40.0 | 3.04e-01 | 87.0% | 46.9% |
| 4953268 | 327.11.2.83 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DUF2096_C | 0.50 | 39.0 | 4.05e-01 | 87.0% | 92.3% |