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IMGVR_UViG_3300002171_000033-3300002171-JGI24732J26686_100044421
Arc-VirIMGVR_UViG_3300002171_000033-3300002171-JGI24732J26686_100044421
Identity
- Kingdom:
- archaea
Quality
61.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-51
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02783.21 best | MCR_beta_N | 27.0 | 4.60e-06 | 96.1% | 23.6% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hz6A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 44.0 | 2.79e-01 | 94.1% | 13.6% |
| 2oarB00 | 1.10.1200.120 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 | 0.64 | 44.0 | 3.28e-01 | 92.2% | 28.8% |
| 4c5wA02 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.58 | 41.0 | 2.61e-01 | 74.5% | 80.1% |
| 2zuvA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 42.0 | 2.60e-01 | 78.4% | 22.2% |
| 1q45A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 44.0 | 2.70e-01 | 90.2% | 33.2% |
| 6sy1A02 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.56 | 43.0 | 2.60e-01 | 84.3% | 15.4% |
| 3gwmA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.55 | 40.0 | 3.05e-01 | 80.4% | 36.4% |
| 4ht4A00 | 3.30.930.30 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › | 0.55 | 44.0 | 3.04e-01 | 92.2% | 56.2% |
| 2ii3A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.52 | 41.0 | 2.72e-01 | 90.2% | 64.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 145510 | 304.35.1.3 ↗ | a+b two layers › Alpha-beta plaits › Methyl-coenzyme M reductase subunits › Methyl-coenzyme M reductase subunits › MCR_beta_N | 0.71 | 59.0 | 4.11e-01 | 96.1% | 96.1% |
| 2769943 | 304.35.1.3 ↗ | a+b two layers › Alpha-beta plaits › Methyl-coenzyme M reductase subunits › Methyl-coenzyme M reductase subunits › MCR_beta_N | 0.70 | 54.0 | 5.20e-01 | 92.2% | 74.2% |
| 4865186 | 304.35.1.3 ↗ | a+b two layers › Alpha-beta plaits › Methyl-coenzyme M reductase subunits › Methyl-coenzyme M reductase subunits › MCR_beta_N | 0.69 | 60.0 | 4.08e-01 | 100.0% | 91.7% |
| 4929910 | 304.35.1.3 ↗ | a+b two layers › Alpha-beta plaits › Methyl-coenzyme M reductase subunits › Methyl-coenzyme M reductase subunits › MCR_beta_N | 0.67 | 56.0 | 3.86e-01 | 100.0% | 95.0% |
| 3309133 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.67 | 39.0 | 3.24e-01 | 82.4% | 35.3% |
| 394331 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.64 | 45.0 | 3.41e-01 | 74.5% | 34.4% |
| 3211211 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.63 | 48.0 | 3.36e-01 | 82.4% | 91.0% |
| 3705380 | 857.1.1.19 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › Ax_dynein_light | 0.63 | 49.0 | 3.89e-01 | 88.2% | 95.7% |
| None | — | 0.60 | 50.0 | 3.00e-01 | 98.0% | 90.8% | |
| 3303720 | 3336.1.1.1 ↗ | alpha complex topology › plant-specific ROP nucleotide exchanger (PRONE) domain › plant-specific ROP nucleotide exchanger (PRONE) domain › plant-specific ROP nucleotide exchanger (PRONE) domain › PRONE | 0.59 | 45.0 | 2.73e-01 | 84.3% | 17.9% |
| 3514906 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 41.0 | 2.84e-01 | 88.2% | 21.1% |
| 3423775 | 601.16.1.8 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › DUF1218 | 0.56 | 47.0 | 3.42e-01 | 96.1% | 80.0% |
| 3998053 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.53 | 33.0 | 3.00e-01 | 90.2% | 42.7% |
| 1566324 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.53 | 44.0 | 3.04e-01 | 92.2% | 85.5% |
| 5026943 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 41.0 | 2.88e-01 | 88.2% | 30.3% |