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IMGVR_UViG_3300002171_000033-3300002171-JGI24732J26686_10004449
Arc-VirIMGVR_UViG_3300002171_000033-3300002171-JGI24732J26686_10004449
Identity
- Kingdom:
- archaea
Quality
60.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 126-171
Domain cluster:
representative
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u78A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 62.0 | 6.28e-01 | 93.5% | 86.7% |
| 3nbiA01 | 1.10.8.1020 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain | 0.77 | 55.0 | 5.10e-01 | 87.0% | 60.3% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.75 | 62.0 | 6.09e-01 | 95.7% | 96.0% |
| 4jqfA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 61.0 | 5.37e-01 | 100.0% | 75.3% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 55.0 | 5.46e-01 | 84.8% | 85.4% |
| 7x0fB01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.71 | 57.0 | 4.89e-01 | 89.1% | 83.6% |
| 2cgqA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.71 | 52.0 | 4.50e-01 | 80.4% | 87.8% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 59.0 | 4.67e-01 | 100.0% | 44.8% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 58.0 | 4.94e-01 | 97.8% | 56.4% |
| 2i6xA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.70 | 57.0 | 5.05e-01 | 95.7% | 81.7% |
| 3me5A01 | 1.10.260.140 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.70 | 54.0 | 4.92e-01 | 87.0% | 62.5% |
| 3solA00 | 1.20.58.1630 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS | 0.70 | 58.0 | 4.81e-01 | 100.0% | 68.1% |
| 1h99A02 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.69 | 53.0 | 4.08e-01 | 84.8% | 84.9% |
| 4jb3A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.69 | 56.0 | 4.98e-01 | 95.7% | 84.7% |
| 4neoA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.69 | 54.0 | 4.58e-01 | 91.3% | 73.5% |
| 2qbyA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 56.0 | 4.70e-01 | 100.0% | 57.8% |
| 2fnaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 55.0 | 4.93e-01 | 97.8% | 63.0% |
| 2cg5B00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.68 | 54.0 | 4.75e-01 | 87.0% | 84.5% |
| 4z4qA04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.68 | 57.0 | 4.67e-01 | 97.8% | 50.6% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 57.0 | 4.63e-01 | 100.0% | 50.0% |
| 3d3oA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.66 | 57.0 | 3.86e-01 | 100.0% | 28.4% |
| 2hzdA00 | 6.10.20.40 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › TEA/ATTS domain | 0.66 | 55.0 | 4.70e-01 | 100.0% | 72.0% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 53.0 | 4.17e-01 | 100.0% | 62.6% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 52.0 | 4.00e-01 | 87.0% | 56.3% |
| 3d5lB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 51.0 | 4.01e-01 | 91.3% | 41.2% |
| 2lh9A00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.64 | 54.0 | 4.62e-01 | 97.8% | 65.4% |
| 4pzcA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.64 | 50.0 | 4.37e-01 | 100.0% | 60.5% |
| 5fmgG00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.64 | 49.0 | 3.18e-01 | 84.8% | 57.5% |
| 1wviA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.64 | 55.0 | 3.90e-01 | 100.0% | 67.6% |
| 3gz5B02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 51.0 | 4.49e-01 | 95.7% | 91.9% |
| 3dsbA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 46.0 | 3.65e-01 | 91.3% | 36.6% |
| 1bh9B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.62 | 47.0 | 3.81e-01 | 84.8% | 42.7% |
| 1dxrL02 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.62 | 53.0 | 4.11e-01 | 100.0% | 58.3% |
| 3kbbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 51.0 | 4.60e-01 | 100.0% | 91.4% |
| 1x4qA01 | 1.20.1390.10 | Mainly Alpha › Up-down Bundle › PWI domain › PWI domain | 0.62 | 52.0 | 4.60e-01 | 100.0% | 84.5% |
| 4gp6A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 53.0 | 3.61e-01 | 100.0% | 74.9% |
| 1u84A00 | 1.10.340.20 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain | 0.61 | 52.0 | 4.41e-01 | 100.0% | 82.7% |
| 4xrpA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 51.0 | 3.69e-01 | 97.8% | 96.4% |
| 4xt1A00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.60 | 45.0 | 2.78e-01 | 82.6% | 34.7% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.60 | 42.0 | 3.63e-01 | 76.1% | 54.7% |
| 3ru0A01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.59 | 44.0 | 3.21e-01 | 82.6% | 45.2% |
| 6muwM00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.58 | 43.0 | 2.83e-01 | 80.4% | 27.7% |
| 6z46V01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.58 | 47.0 | 3.18e-01 | 91.3% | 87.9% |
| 2wtbA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.58 | 47.0 | 2.90e-01 | 91.3% | 45.7% |
| 4eekA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 49.0 | 4.40e-01 | 100.0% | 89.4% |
| 5swvC02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.58 | 45.0 | 3.28e-01 | 87.0% | 84.6% |
| 2gptA03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 46.0 | 3.27e-01 | 93.5% | 89.3% |
| 2q0iA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 50.0 | 3.09e-01 | 100.0% | 35.7% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.57 | 48.0 | 4.04e-01 | 100.0% | 86.0% |
| 1h99A01 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.56 | 44.0 | 3.58e-01 | 97.8% | 91.3% |
| 2eggB01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.55 | 44.0 | 3.13e-01 | 93.5% | 90.0% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 47.0 | 4.15e-01 | 100.0% | 68.2% |
| 3unbF00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.53 | 46.0 | 2.93e-01 | 100.0% | 80.7% |
| 2ra1A01 | 1.20.58.790 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 45.0 | 3.54e-01 | 97.8% | 44.9% |
| 6g9sA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 45.0 | 2.74e-01 | 100.0% | 98.2% |
| 1zarA03 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 45.0 | 3.56e-01 | 97.8% | 81.4% |
| 1rypL00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.52 | 40.0 | 2.77e-01 | 100.0% | 24.1% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 45.0 | 3.23e-01 | 97.8% | 75.9% |
| 1vw4801 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.51 | 38.0 | 3.40e-01 | 87.0% | 75.3% |
| 3ufeA02 | 1.20.58.1950 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 36.0 | 3.51e-01 | 91.3% | 69.8% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.50 | 44.0 | 3.21e-01 | 97.8% | 51.2% |
| 1vb3A01 | 3.90.1380.10 | Alpha Beta › Alpha-Beta Complex › threonine synthase, domain 1, chain A › Threonine synthase, N-terminal domain | 0.50 | 35.0 | 2.95e-01 | 73.9% | 44.4% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3723123 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.98 | 87.0 | 7.83e-01 | 93.5% | 73.3% |
| 3740014 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 84.0 | 7.17e-01 | 100.0% | 64.3% |
| 5047162 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 75.0 | 6.57e-01 | 87.0% | 61.5% |
| 4014657 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 79.0 | 7.42e-01 | 93.5% | 78.2% |
| 5013811 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 75.0 | 7.04e-01 | 89.1% | 74.5% |
| 4978898 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 79.0 | 7.99e-01 | 93.5% | 95.6% |
| 4926838 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.90 | 81.0 | 7.21e-01 | 100.0% | 70.8% |
| 4927588 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 80.0 | 6.76e-01 | 100.0% | 61.3% |
| 3980764 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 75.0 | 7.58e-01 | 93.5% | 93.3% |
| 3901968 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 71.0 | 7.48e-01 | 89.1% | 100.0% |
| 5079851 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 78.0 | 7.16e-01 | 100.0% | 76.7% |
| 3709551 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 82.0 | 7.38e-01 | 100.0% | 76.7% |
| 4105352 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.88 | 75.0 | 4.56e-01 | 100.0% | 16.1% |
| 4959187 | 101.1.2.489 ↗ | alpha arrays › HTH › HTH › winged helix domain › Transposase_mut | 0.88 | 76.0 | 7.39e-01 | 100.0% | 88.0% |
| 5049604 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 76.0 | 7.13e-01 | 100.0% | 80.0% |
| 3590835 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.87 | 74.0 | 7.54e-01 | 100.0% | 97.8% |
| 5050956 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.87 | 75.0 | 4.43e-01 | 100.0% | 13.6% |
| 5028095 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.87 | 77.0 | 5.86e-01 | 100.0% | 43.8% |
| 3506369 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.87 | 75.0 | 4.44e-01 | 100.0% | 14.4% |
| 3730184 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.87 | 73.0 | 6.88e-01 | 93.5% | 80.0% |
| 3684956 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.87 | 73.0 | 6.48e-01 | 93.5% | 66.2% |
| 3910504 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 73.0 | 7.14e-01 | 93.5% | 86.0% |
| 3255630 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 73.0 | 6.65e-01 | 93.5% | 71.7% |
| 4978113 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.86 | 76.0 | 7.41e-01 | 100.0% | 92.0% |
| 5029224 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 76.0 | 6.97e-01 | 100.0% | 76.7% |
| 3738343 | 101.1.1.79 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_ABP1_N | 0.86 | 76.0 | 6.91e-01 | 97.8% | 80.0% |
| 3884711 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 73.0 | 6.46e-01 | 93.5% | 69.2% |
| 3692546 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.86 | 71.0 | 6.99e-01 | 93.5% | 88.0% |
| 3693971 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.86 | 72.0 | 6.78e-01 | 93.5% | 80.0% |
| 3720398 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.85 | 71.0 | 6.54e-01 | 93.5% | 73.3% |
| 3962597 | 101.1.3.13 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Transposase_mut | 0.85 | 73.0 | 6.50e-01 | 100.0% | 67.7% |
| 3961039 | 101.1.3.13 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Transposase_mut | 0.85 | 72.0 | 7.28e-01 | 100.0% | 95.6% |
| 3957316 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.85 | 73.0 | 6.49e-01 | 100.0% | 67.7% |
| 4929815 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 76.0 | 6.74e-01 | 100.0% | 70.8% |
| 3958041 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 73.0 | 6.49e-01 | 100.0% | 67.7% |
| 3191996 | 101.1.2.480 ↗ | alpha arrays › HTH › HTH › winged helix domain › Clr5 | 0.85 | 69.0 | 6.57e-01 | 93.5% | 76.4% |
| 3908865 | 101.1.2.536 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 | 0.84 | 70.0 | 6.67e-01 | 93.5% | 81.8% |
| 3589089 | 101.1.2.489 ↗ | alpha arrays › HTH › HTH › winged helix domain › Transposase_mut | 0.84 | 71.0 | 5.42e-01 | 100.0% | 41.9% |
| 3590733 | 101.1.2.489 ↗ | alpha arrays › HTH › HTH › winged helix domain › Transposase_mut | 0.84 | 76.0 | 7.39e-01 | 100.0% | 94.0% |
| 4274627 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.84 | 71.0 | 6.51e-01 | 100.0% | 73.3% |
| 4019326 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.84 | 70.0 | 6.62e-01 | 93.5% | 80.0% |
| 3620979 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 74.0 | 6.95e-01 | 97.8% | 94.5% |
| 3721082 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.84 | 69.0 | 6.58e-01 | 93.5% | 80.0% |
| 4031678 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.84 | 68.0 | 6.10e-01 | 91.3% | 67.7% |
| 4129575 | 101.1.1.187 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_33 | 0.84 | 71.0 | 6.28e-01 | 93.5% | 81.5% |
| 3487537 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 68.0 | 6.65e-01 | 91.3% | 82.0% |
| 3933926 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 70.0 | 6.22e-01 | 93.5% | 67.7% |
| 4944094 | 4156.1.1.7 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › DUF5814 | 0.83 | 71.0 | 4.98e-01 | 100.0% | 30.7% |
| 3617137 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 73.0 | 6.87e-01 | 100.0% | 94.5% |
| 3696266 | 109.4.1.547 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Clr5 | 0.82 | 67.0 | 3.79e-01 | 93.5% | 8.4% |
| 3629477 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 72.0 | 6.60e-01 | 100.0% | 86.7% |
| 5016992 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 66.0 | 6.71e-01 | 93.5% | 93.3% |
| 5049118 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 70.0 | 6.29e-01 | 100.0% | 73.8% |
| 4958195 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 70.0 | 6.66e-01 | 100.0% | 83.6% |
| 3618386 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 62.0 | 6.33e-01 | 84.8% | 91.1% |
| 3575777 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.81 | 66.0 | 6.50e-01 | 93.5% | 98.0% |
| 3962579 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 71.0 | 5.01e-01 | 100.0% | 34.3% |
| 3987909 | 138.1.1.9 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C | 0.80 | 70.0 | 5.01e-01 | 100.0% | 63.7% |
| 3574709 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 62.0 | 5.68e-01 | 87.0% | 76.7% |
| 4889887 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.78 | 64.0 | 4.53e-01 | 100.0% | 29.5% |
| 4975020 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.78 | 65.0 | 4.64e-01 | 100.0% | 31.9% |
| 3793542 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 67.0 | 6.21e-01 | 100.0% | 86.7% |
| 3621273 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.77 | 59.0 | 5.61e-01 | 84.8% | 81.8% |
| 5003693 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 65.0 | 5.79e-01 | 93.5% | 69.2% |
| 5017698 | 101.1.1.187 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_33 | 0.77 | 64.0 | 5.73e-01 | 93.5% | 81.5% |
| 4215069 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 67.0 | 5.42e-01 | 100.0% | 57.8% |
| 3618803 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 66.0 | 6.11e-01 | 97.8% | 85.0% |
| 5023957 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.77 | 67.0 | 5.62e-01 | 100.0% | 61.3% |
| 3740038 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.77 | 63.0 | 6.19e-01 | 93.5% | 90.0% |
| 5021354 | 101.1.2.619 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_33 | 0.77 | 64.0 | 5.73e-01 | 93.5% | 69.2% |
| 5008720 | 101.1.1.548 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_32 | 0.76 | 64.0 | 5.75e-01 | 93.5% | 69.2% |
| 4965088 | 101.1.2.909 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF5797 | 0.76 | 66.0 | 5.46e-01 | 100.0% | 58.8% |
| 4501343 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.76 | 63.0 | 5.94e-01 | 91.3% | 81.8% |
| 5007660 | 101.1.1.187 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_33 | 0.76 | 64.0 | 5.69e-01 | 93.5% | 69.2% |
| 4966213 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 62.0 | 5.56e-01 | 91.3% | 67.7% |
| 4026717 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 66.0 | 5.78e-01 | 100.0% | 68.6% |
| 4968187 | 101.1.2.619 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_33 | 0.76 | 64.0 | 5.69e-01 | 93.5% | 89.2% |
| 5065250 | 4156.1.1.7 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › DUF5814 | 0.76 | 66.0 | 4.74e-01 | 100.0% | 35.6% |
| 5082110 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 66.0 | 6.05e-01 | 100.0% | 76.7% |
| 4994794 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 65.0 | 5.58e-01 | 100.0% | 64.0% |
| 3931083 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.74 | 63.0 | 6.22e-01 | 97.8% | 92.0% |
| 3334149 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 63.0 | 6.03e-01 | 100.0% | 89.1% |
| 3724068 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 58.0 | 5.60e-01 | 93.5% | 78.2% |
| 4941699 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 65.0 | 5.53e-01 | 100.0% | 65.3% |
| 5028090 | 610.3.1.0 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain | 0.73 | 56.0 | 3.94e-01 | 84.8% | 30.3% |
| 3814136 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 63.0 | 5.97e-01 | 100.0% | 87.3% |
| 3243611 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 62.0 | 6.03e-01 | 100.0% | 86.0% |
| 3366917 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.71 | 60.0 | 5.76e-01 | 100.0% | 87.3% |
| 3506989 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 59.0 | 5.77e-01 | 93.5% | 88.0% |
| 3467989 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 61.0 | 5.64e-01 | 100.0% | 81.7% |
| 3422646 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 59.0 | 5.53e-01 | 100.0% | 80.0% |
| 4995581 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.71 | 59.0 | 4.74e-01 | 100.0% | 69.0% |
| 3417440 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.70 | 59.0 | 4.36e-01 | 100.0% | 36.3% |
| 4953119 | 101.1.2.805 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF26350 | 0.70 | 60.0 | 4.05e-01 | 100.0% | 30.6% |
| 3454767 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 59.0 | 5.67e-01 | 100.0% | 85.5% |
| 3326259 | 1091.1.1.0 ↗ | alpha arrays › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 | 0.68 | 57.0 | 5.60e-01 | 100.0% | 94.0% |
| 3619546 | 3712.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 | 0.67 | 49.0 | 4.51e-01 | 84.8% | 58.5% |
| 3405944 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.63 | 45.0 | 3.91e-01 | 91.3% | 46.7% |
| 3191686 | 102.1.4.4 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain › PF25871 | 0.57 | 45.0 | 3.62e-01 | 97.8% | 85.3% |
D2
high
residues 267-325
Domain cluster:
representative
CATH (85)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.87 | 59.0 | 6.68e-01 | 81.4% | 93.3% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 69.0 | 6.74e-01 | 84.7% | 81.0% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.86 | 63.0 | 6.52e-01 | 78.0% | 82.1% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 69.0 | 6.61e-01 | 84.7% | 75.8% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 59.0 | 6.10e-01 | 74.6% | 76.8% |
| 1tc3C00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.84 | 60.0 | 6.40e-01 | 83.1% | 86.3% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.84 | 59.0 | 6.74e-01 | 88.1% | 100.0% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.83 | 65.0 | 6.74e-01 | 83.1% | 92.7% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 59.0 | 5.78e-01 | 74.6% | 69.8% |
| 3k9tA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 59.0 | 5.66e-01 | 74.6% | 66.7% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 56.0 | 5.69e-01 | 74.6% | 72.4% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 58.0 | 5.49e-01 | 76.3% | 62.9% |
| 3frwB00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.82 | 62.0 | 5.24e-01 | 81.4% | 50.0% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 57.0 | 5.58e-01 | 72.9% | 69.8% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 57.0 | 4.96e-01 | 74.6% | 50.6% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.80 | 57.0 | 3.82e-01 | 74.6% | 21.4% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 59.0 | 6.19e-01 | 78.0% | 88.9% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.80 | 59.0 | 6.22e-01 | 78.0% | 100.0% |
| 2llkA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.80 | 53.0 | 6.18e-01 | 71.2% | 100.0% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.80 | 71.0 | 4.52e-01 | 96.6% | 22.7% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.79 | 64.0 | 5.45e-01 | 88.1% | 55.3% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 59.0 | 5.81e-01 | 79.7% | 75.0% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 62.0 | 5.09e-01 | 84.7% | 48.6% |
| 3g3zA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 58.0 | 5.70e-01 | 78.0% | 71.9% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 56.0 | 5.05e-01 | 74.6% | 56.2% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 56.0 | 5.13e-01 | 74.6% | 58.7% |
| 1umqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.79 | 57.0 | 5.68e-01 | 76.3% | 83.3% |
| 3c57B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 58.0 | 6.30e-01 | 83.1% | 93.9% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 55.0 | 4.81e-01 | 72.9% | 50.6% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 55.0 | 5.20e-01 | 74.6% | 61.1% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 62.0 | 6.08e-01 | 86.4% | 80.0% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 55.0 | 5.59e-01 | 74.6% | 75.9% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 54.0 | 5.83e-01 | 72.9% | 90.0% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.78 | 55.0 | 4.23e-01 | 74.6% | 35.1% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 54.0 | 4.60e-01 | 72.9% | 47.9% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 58.0 | 5.57e-01 | 79.7% | 74.6% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 58.0 | 5.69e-01 | 81.4% | 74.6% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 54.0 | 5.42e-01 | 74.6% | 73.8% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.77 | 60.0 | 4.66e-01 | 84.7% | 46.0% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 58.0 | 5.43e-01 | 81.4% | 68.1% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 58.0 | 5.60e-01 | 83.1% | 74.6% |
| 3e6mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 55.0 | 4.12e-01 | 78.0% | 37.0% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 56.0 | 5.14e-01 | 79.7% | 65.8% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 52.0 | 4.54e-01 | 74.6% | 48.9% |
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 54.0 | 4.09e-01 | 78.0% | 39.1% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 52.0 | 4.53e-01 | 74.6% | 49.4% |
| 2w48B01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 57.0 | 6.06e-01 | 84.7% | 100.0% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 56.0 | 6.02e-01 | 86.4% | 98.0% |
| 1b9mB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 54.0 | 4.54e-01 | 79.7% | 56.6% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 51.0 | 4.46e-01 | 74.6% | 51.1% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 54.0 | 4.86e-01 | 81.4% | 58.0% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 57.0 | 5.14e-01 | 86.4% | 67.5% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 53.0 | 3.98e-01 | 79.7% | 46.1% |
| 2q0oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 57.0 | 5.51e-01 | 86.4% | 79.1% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.71 | 51.0 | 4.27e-01 | 84.7% | 45.4% |
| 2y75A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 54.0 | 4.27e-01 | 83.1% | 42.4% |
| 1ft9A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 53.0 | 4.78e-01 | 79.7% | 72.2% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 54.0 | 4.88e-01 | 81.4% | 62.8% |
| 5cvrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 50.0 | 4.48e-01 | 76.3% | 83.3% |
| 3bddD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 55.0 | 4.22e-01 | 84.7% | 43.9% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 58.0 | 6.08e-01 | 91.5% | 98.1% |
| 1k6yA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.70 | 47.0 | 5.08e-01 | 81.4% | 89.1% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.70 | 57.0 | 4.69e-01 | 91.5% | 98.2% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.70 | 52.0 | 4.01e-01 | 83.1% | 52.5% |
| 5y9sC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 50.0 | 4.56e-01 | 78.0% | 70.7% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.69 | 52.0 | 5.36e-01 | 81.4% | 85.7% |
| 2lvsA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 48.0 | 5.11e-01 | 81.4% | 91.8% |
| 3w6kC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 57.0 | 5.05e-01 | 94.9% | 83.9% |
| 4ev0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 50.0 | 4.58e-01 | 81.4% | 68.8% |
| 3lstA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 50.0 | 4.41e-01 | 81.4% | 55.8% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 48.0 | 3.66e-01 | 79.7% | 44.7% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 4.64e-01 | 86.4% | 73.8% |
| 2jrtA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 47.0 | 4.29e-01 | 83.1% | 60.5% |
| 2m8gX00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 47.0 | 4.51e-01 | 79.7% | 67.1% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 49.0 | 3.71e-01 | 86.4% | 65.6% |
| 2gauA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 50.0 | 4.50e-01 | 86.4% | 74.1% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 44.0 | 4.30e-01 | 72.9% | 67.7% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 52.0 | 4.87e-01 | 94.9% | 100.0% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 45.0 | 4.11e-01 | 76.3% | 64.5% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 45.0 | 4.00e-01 | 76.3% | 87.8% |
| 3f2gA00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.61 | 52.0 | 3.57e-01 | 94.9% | 80.0% |
| 3cjdA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 49.0 | 3.55e-01 | 96.6% | 57.7% |
| 5k3hB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 47.0 | 3.67e-01 | 96.6% | 94.0% |
| 2ao9I01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 41.0 | 3.68e-01 | 81.4% | 57.5% |
| 3g7dA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.52 | 42.0 | 3.71e-01 | 88.1% | 95.3% |
ECOD (98)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4973199 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.94 | 65.0 | 6.46e-01 | 74.6% | 70.0% |
| 4162857 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.94 | 67.0 | 7.32e-01 | 79.7% | 88.0% |
| 5070354 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.94 | 70.0 | 6.22e-01 | 78.0% | 57.5% |
| 5077769 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.93 | 72.0 | 7.84e-01 | 83.1% | 96.0% |
| 4952807 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.93 | 71.0 | 6.42e-01 | 79.7% | 62.7% |
| 4458444 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.92 | 74.0 | 6.14e-01 | 84.7% | 52.6% |
| 4929382 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 77.0 | 7.99e-01 | 91.5% | 96.4% |
| 3879118 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.92 | 67.0 | 6.94e-01 | 83.1% | 81.8% |
| 4927516 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.91 | 64.0 | 6.39e-01 | 72.9% | 71.7% |
| 5003692 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.91 | 68.0 | 6.53e-01 | 78.0% | 70.8% |
| 5004314 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.91 | 67.0 | 6.14e-01 | 78.0% | 61.3% |
| 4054648 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 68.0 | 7.10e-01 | 79.7% | 89.1% |
| 4970998 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.90 | 65.0 | 5.27e-01 | 74.6% | 45.0% |
| 3589359 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.89 | 58.0 | 6.89e-01 | 74.6% | 100.0% |
| 5080109 | 101.1.2.139 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_23 | 0.89 | 66.0 | 6.01e-01 | 78.0% | 61.3% |
| 3278040 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 62.0 | 6.16e-01 | 74.6% | 71.7% |
| 4979402 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.88 | 66.0 | 6.64e-01 | 86.4% | 78.3% |
| 3800176 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 79.0 | 6.90e-01 | 98.3% | 69.4% |
| 3587644 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.87 | 64.0 | 6.45e-01 | 78.0% | 83.3% |
| 3793383 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.87 | 72.0 | 6.94e-01 | 88.1% | 81.5% |
| 5056682 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 69.0 | 6.48e-01 | 91.5% | 71.4% |
| 4943227 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.87 | 63.0 | 7.08e-01 | 84.7% | 100.0% |
| 4965811 | 101.1.1.559 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7858 | 0.87 | 64.0 | 6.36e-01 | 76.3% | 78.3% |
| 3789627 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 70.0 | 6.75e-01 | 84.7% | 76.9% |
| 3632861 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 60.0 | 6.73e-01 | 74.6% | 95.6% |
| 3998880 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 76.0 | 6.40e-01 | 96.6% | 61.1% |
| 4008959 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 62.0 | 6.46e-01 | 76.3% | 81.8% |
| 4002905 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 65.0 | 6.32e-01 | 89.8% | 73.8% |
| 5030780 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.85 | 67.0 | 7.12e-01 | 89.8% | 100.0% |
| 3933366 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.85 | 65.0 | 6.15e-01 | 86.4% | 68.6% |
| 4198219 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 58.0 | 6.47e-01 | 83.1% | 93.3% |
| 3707219 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.84 | 62.0 | 4.85e-01 | 81.4% | 38.3% |
| 5063318 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.84 | 63.0 | 6.54e-01 | 79.7% | 96.4% |
| 5057202 | 101.1.3.8 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 | 0.84 | 65.0 | 6.10e-01 | 83.1% | 71.4% |
| 3590541 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.84 | 60.0 | 4.18e-01 | 78.0% | 25.0% |
| 1159643 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.83 | 65.0 | 6.09e-01 | 83.1% | 71.8% |
| 3945880 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.83 | 65.0 | 6.73e-01 | 89.8% | 89.1% |
| 5006645 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.83 | 61.0 | 6.09e-01 | 84.7% | 76.7% |
| 5060990 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.83 | 75.0 | 4.67e-01 | 96.6% | 20.9% |
| 4952035 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.82 | 60.0 | 5.97e-01 | 81.4% | 75.0% |
| 4624269 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 61.0 | 6.11e-01 | 81.4% | 78.3% |
| 4139052 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 60.0 | 5.55e-01 | 78.0% | 61.3% |
| 3401087 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.82 | 58.0 | 6.26e-01 | 84.7% | 88.0% |
| 3985633 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.82 | 68.0 | 7.03e-01 | 96.6% | 96.4% |
| 5050152 | 101.1.3.35 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Terminase_5 | 0.82 | 60.0 | 6.49e-01 | 81.4% | 92.0% |
| 3287536 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 58.0 | 6.61e-01 | 83.1% | 97.8% |
| 4280807 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.82 | 65.0 | 6.72e-01 | 89.8% | 90.9% |
| 3589364 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.82 | 66.0 | 4.95e-01 | 86.4% | 63.0% |
| 5007028 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.82 | 59.0 | 6.13e-01 | 81.4% | 81.8% |
| 3404418 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.81 | 59.0 | 5.55e-01 | 83.1% | 64.3% |
| 5004841 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 58.0 | 5.68e-01 | 81.4% | 69.2% |
| 3997733 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 71.0 | 6.91e-01 | 98.3% | 86.2% |
| 3283589 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.80 | 60.0 | 6.46e-01 | 84.7% | 96.0% |
| 4002185 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.80 | 57.0 | 5.23e-01 | 84.7% | 58.7% |
| 3391053 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 57.0 | 6.31e-01 | 83.1% | 100.0% |
| 3753093 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.80 | 54.0 | 5.30e-01 | 83.1% | 64.6% |
| 3943462 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 59.0 | 6.10e-01 | 79.7% | 83.6% |
| 4349614 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.80 | 63.0 | 6.55e-01 | 86.4% | 92.7% |
| 3944309 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.80 | 56.0 | 6.04e-01 | 74.6% | 88.0% |
| 3706139 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 58.0 | 6.22e-01 | 86.4% | 92.0% |
| 4245572 | 101.1.8.16 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_40 | 0.79 | 59.0 | 5.60e-01 | 83.1% | 67.1% |
| 3640035 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 57.0 | 5.03e-01 | 84.7% | 52.9% |
| 3873677 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.79 | 57.0 | 5.40e-01 | 84.7% | 64.3% |
| 4347676 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.79 | 65.0 | 5.63e-01 | 89.8% | 60.0% |
| 5024511 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 54.0 | 5.80e-01 | 83.1% | 86.0% |
| 3947091 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.79 | 57.0 | 5.76e-01 | 78.0% | 81.7% |
| 3857628 | 101.1.3.29 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › CENP-B_N | 0.78 | 53.0 | 5.18e-01 | 83.1% | 64.6% |
| 3693312 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 53.0 | 5.32e-01 | 71.2% | 71.7% |
| 3568862 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.78 | 55.0 | 5.40e-01 | 84.7% | 67.7% |
| 5013438 | 101.1.2.881 ↗ | alpha arrays › HTH › HTH › winged helix domain › UPF0175 | 0.78 | 55.0 | 5.47e-01 | 74.6% | 80.0% |
| 3916395 | 101.1.1.129 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 | 0.77 | 64.0 | 5.28e-01 | 98.3% | 51.4% |
| 5002577 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.76 | 65.0 | 5.22e-01 | 96.6% | 47.5% |
| 3913655 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.76 | 63.0 | 5.73e-01 | 98.3% | 67.5% |
| 4031535 | 101.1.1.275 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GerE | 0.76 | 56.0 | 5.66e-01 | 79.7% | 78.3% |
| 4533441 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.76 | 63.0 | 5.35e-01 | 89.8% | 56.8% |
| 4944887 | 101.1.1.546 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ThiN | 0.76 | 61.0 | 4.76e-01 | 88.1% | 42.5% |
| 4642479 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.76 | 56.0 | 4.79e-01 | 79.7% | 49.5% |
| 4008322 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.75 | 55.0 | 5.71e-01 | 84.7% | 83.6% |
| 3953111 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.75 | 61.0 | 5.76e-01 | 88.1% | 77.1% |
| 3976103 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.75 | 55.0 | 5.32e-01 | 78.0% | 75.4% |
| 3283500 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.75 | 58.0 | 6.29e-01 | 83.1% | 100.0% |
| 4197050 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.75 | 60.0 | 5.00e-01 | 89.8% | 50.5% |
| 3919175 | 101.1.1.129 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 | 0.74 | 60.0 | 4.92e-01 | 94.9% | 48.2% |
| 3983783 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.74 | 66.0 | 5.60e-01 | 98.3% | 63.2% |
| 3991300 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 54.0 | 4.84e-01 | 79.7% | 56.2% |
| 5081088 | 101.1.2.932 ↗ | alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc | 0.74 | 55.0 | 4.96e-01 | 86.4% | 57.8% |
| 4106860 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.74 | 61.0 | 5.21e-01 | 89.8% | 56.8% |
| 4437729 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.73 | 59.0 | 4.90e-01 | 89.8% | 51.0% |
| 3191582 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.73 | 63.0 | 4.92e-01 | 100.0% | 44.6% |
| 4863786 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.72 | 59.0 | 6.15e-01 | 91.5% | 96.4% |
| 3955106 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.72 | 55.0 | 4.73e-01 | 83.1% | 53.3% |
| 4262428 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.72 | 63.0 | 3.95e-01 | 98.3% | 59.0% |
| 4133358 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 53.0 | 3.92e-01 | 79.7% | 30.3% |
| 3282047 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.72 | 57.0 | 4.79e-01 | 86.4% | 56.0% |
| 5002651 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.70 | 55.0 | 4.73e-01 | 86.4% | 87.4% |
| 4174590 | 101.1.2.61 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 | 0.70 | 57.0 | 5.56e-01 | 89.8% | 90.8% |
| 2792505 | 101.1.2.139 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_23 | 0.70 | 61.0 | 6.24e-01 | 94.9% | 98.2% |
| 3887530 | 101.1.10.41 ↗ | alpha arrays › HTH › HTH › Cyclin-like › HTH_Tnp_4 | 0.68 | 55.0 | 4.84e-01 | 98.3% | 60.0% |
D3
high
residues 358-410
Domain cluster:
representative
CATH (59)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u78A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 65.0 | 7.00e-01 | 86.8% | 95.6% |
| 2np2A00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.86 | 59.0 | 4.68e-01 | 71.7% | 40.2% |
| 1k78I00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 67.0 | 6.49e-01 | 83.0% | 86.2% |
| 1fokA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 73.0 | 6.12e-01 | 94.3% | 58.6% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 64.0 | 5.83e-01 | 94.3% | 62.9% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.80 | 60.0 | 4.79e-01 | 94.3% | 40.4% |
| 2p5kA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 65.0 | 6.14e-01 | 88.7% | 77.8% |
| 3fdqA01 | 1.20.120.1030 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Motility repressor MogR, DNA-binding domain | 0.79 | 65.0 | 4.85e-01 | 88.7% | 43.4% |
| 5ui5I04 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 62.0 | 5.93e-01 | 88.7% | 76.2% |
| 3lapA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 68.0 | 6.19e-01 | 94.3% | 95.6% |
| 3eyyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 64.0 | 5.58e-01 | 94.3% | 62.2% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 62.0 | 5.26e-01 | 94.3% | 57.1% |
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 63.0 | 5.58e-01 | 94.3% | 65.4% |
| 6dewA01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.75 | 65.0 | 4.44e-01 | 100.0% | 33.7% |
| 2g9wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 62.0 | 5.77e-01 | 94.3% | 76.1% |
| 2fe3B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 61.0 | 5.31e-01 | 94.3% | 60.0% |
| 2fnaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 60.0 | 5.47e-01 | 94.3% | 68.5% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 63.0 | 4.96e-01 | 98.1% | 61.6% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 56.0 | 5.30e-01 | 94.3% | 68.7% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.73 | 63.0 | 4.66e-01 | 100.0% | 44.8% |
| 1mzbA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 60.0 | 5.23e-01 | 94.3% | 61.0% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.72 | 61.0 | 4.59e-01 | 100.0% | 49.3% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 63.0 | 5.66e-01 | 100.0% | 94.7% |
| 1sd4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 57.0 | 5.43e-01 | 92.5% | 100.0% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 59.0 | 4.89e-01 | 100.0% | 70.9% |
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 5.24e-01 | 100.0% | 85.7% |
| 3d5lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 51.0 | 5.41e-01 | 81.1% | 95.6% |
| 2va8A03 | 1.10.3380.30 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.68 | 58.0 | 3.88e-01 | 100.0% | 88.7% |
| 3oymA01 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.68 | 52.0 | 4.41e-01 | 88.7% | 49.5% |
| 4rayA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 57.0 | 5.01e-01 | 100.0% | 78.8% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.67 | 44.0 | 3.81e-01 | 79.2% | 45.6% |
| 2h92A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 57.0 | 3.75e-01 | 100.0% | 47.7% |
| 4em2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 54.0 | 3.97e-01 | 98.1% | 66.7% |
| 1rylA00 | 3.40.1760.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › YfbM-like super family | 0.63 | 51.0 | 3.85e-01 | 100.0% | 68.2% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 52.0 | 4.69e-01 | 100.0% | 66.3% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 50.0 | 4.16e-01 | 94.3% | 66.7% |
| 1g2rA00 | 3.30.1230.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like | 0.62 | 54.0 | 4.50e-01 | 100.0% | 74.5% |
| 2lbfB01 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 49.0 | 4.61e-01 | 94.3% | 72.5% |
| 5nl9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 49.0 | 4.36e-01 | 94.3% | 59.5% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 50.0 | 4.69e-01 | 100.0% | 73.9% |
| 4behA01 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 50.0 | 4.77e-01 | 94.3% | 98.4% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.61 | 47.0 | 4.95e-01 | 88.7% | 100.0% |
| 3dptB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 50.0 | 4.63e-01 | 94.3% | 72.5% |
| 3e3rB01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.60 | 50.0 | 4.31e-01 | 94.3% | 74.1% |
| 2ew2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.60 | 49.0 | 3.83e-01 | 100.0% | 56.7% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 46.0 | 4.26e-01 | 88.7% | 87.7% |
| 3a1yA00 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.59 | 49.0 | 4.84e-01 | 100.0% | 91.4% |
| 4hhyC01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.59 | 52.0 | 3.91e-01 | 100.0% | 63.4% |
| 2b8iA00 | 1.20.1280.100 | Mainly Alpha › Up-down Bundle › Monooxygenase › Pas factor, saposin domain | 0.59 | 45.0 | 4.05e-01 | 86.8% | 90.9% |
| 6g85A01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.57 | 45.0 | 3.38e-01 | 90.6% | 37.2% |
| 2bl0B01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.57 | 40.0 | 3.73e-01 | 75.5% | 66.2% |
| 4ri6A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 44.0 | 3.39e-01 | 98.1% | 37.8% |
| 2reoA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 45.0 | 3.16e-01 | 100.0% | 77.3% |
| 1zc6A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 38.0 | 2.75e-01 | 73.6% | 25.6% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.54 | 47.0 | 4.26e-01 | 100.0% | 75.7% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 46.0 | 3.64e-01 | 98.1% | 73.8% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.51 | 40.0 | 3.55e-01 | 86.8% | 79.7% |
| 2co9A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.50 | 41.0 | 3.32e-01 | 90.6% | 76.5% |
| 6pe0E01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.50 | 40.0 | 4.00e-01 | 86.8% | 94.3% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927804 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.92 | 83.0 | 7.33e-01 | 100.0% | 69.3% |
| 4928271 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 67.0 | 7.57e-01 | 75.5% | 100.0% |
| 4945040 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.91 | 75.0 | 7.20e-01 | 88.7% | 78.3% |
| 4944585 | 101.1.2.872 ↗ | alpha arrays › HTH › HTH › winged helix domain › rve | 0.90 | 75.0 | 7.20e-01 | 88.7% | 78.3% |
| 4946654 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 75.0 | 7.18e-01 | 88.7% | 78.3% |
| 3590474 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 82.0 | 6.91e-01 | 100.0% | 63.5% |
| 5074546 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.89 | 78.0 | 6.55e-01 | 94.3% | 60.0% |
| 3899987 | 101.1.1.12 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 | 0.89 | 73.0 | 6.13e-01 | 88.7% | 56.5% |
| 3998215 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.88 | 81.0 | 7.13e-01 | 100.0% | 72.0% |
| 3934874 | 101.1.1.396 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Arg_repressor | 0.88 | 73.0 | 7.24e-01 | 88.7% | 87.3% |
| 3887965 | 101.1.1.12 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 | 0.88 | 72.0 | 7.16e-01 | 88.7% | 87.3% |
| 3878549 | 101.1.2.536 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 | 0.88 | 72.0 | 7.15e-01 | 88.7% | 87.3% |
| 3941666 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.87 | 77.0 | 6.80e-01 | 98.1% | 68.9% |
| 4971786 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 76.0 | 6.02e-01 | 94.3% | 51.0% |
| 3930425 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 79.0 | 5.69e-01 | 100.0% | 38.1% |
| 4929129 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 78.0 | 7.49e-01 | 98.1% | 88.3% |
| 4103293 | 101.1.2.62 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sigma54_DBD | 0.86 | 71.0 | 6.09e-01 | 88.7% | 65.0% |
| 3391047 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 72.0 | 6.90e-01 | 92.5% | 80.0% |
| 3946360 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 77.0 | 7.20e-01 | 100.0% | 83.1% |
| 3692027 | 101.1.2.480 ↗ | alpha arrays › HTH › HTH › winged helix domain › Clr5 | 0.85 | 69.0 | 6.89e-01 | 88.7% | 87.3% |
| 3221998 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 77.0 | 5.48e-01 | 100.0% | 36.6% |
| 3477001 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.84 | 77.0 | 5.39e-01 | 100.0% | 39.3% |
| 4979742 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 71.0 | 6.19e-01 | 94.3% | 63.7% |
| 4979726 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 71.0 | 6.48e-01 | 94.3% | 74.3% |
| 4145524 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.83 | 65.0 | 6.13e-01 | 86.8% | 75.4% |
| 4274627 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.82 | 71.0 | 6.85e-01 | 100.0% | 85.0% |
| 5049118 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 74.0 | 6.92e-01 | 100.0% | 86.2% |
| 5047005 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 71.0 | 6.64e-01 | 96.2% | 80.0% |
| 4096180 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.82 | 65.0 | 6.23e-01 | 84.9% | 76.7% |
| 3987150 | 101.1.1.382 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_IS66 | 0.82 | 67.0 | 6.87e-01 | 90.6% | 96.0% |
| 5024512 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 64.0 | 6.62e-01 | 88.7% | 92.0% |
| 5044657 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 68.0 | 6.53e-01 | 94.3% | 80.0% |
| 3981939 | 101.1.1.202 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 | 0.81 | 64.0 | 6.34e-01 | 86.8% | 87.3% |
| 5047202 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 69.0 | 6.29e-01 | 94.3% | 71.4% |
| 4958195 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 70.0 | 6.98e-01 | 98.1% | 94.5% |
| 4106869 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.81 | 70.0 | 6.31e-01 | 94.3% | 91.4% |
| 4008778 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 64.0 | 6.41e-01 | 88.7% | 87.3% |
| 3942452 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.80 | 63.0 | 5.79e-01 | 86.8% | 68.6% |
| 3927016 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.80 | 72.0 | 4.94e-01 | 100.0% | 34.9% |
| 3984597 | 101.1.2.488 ↗ | alpha arrays › HTH › HTH › winged helix domain › DDE_Tnp_IS66 | 0.80 | 70.0 | 5.91e-01 | 100.0% | 58.9% |
| 5000850 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 68.0 | 6.58e-01 | 94.3% | 85.0% |
| 3450774 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 71.0 | 6.48e-01 | 100.0% | 77.1% |
| 5079733 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 67.0 | 6.00e-01 | 94.3% | 66.7% |
| 3617137 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 69.0 | 6.85e-01 | 96.2% | 98.2% |
| 4975263 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.79 | 71.0 | 6.01e-01 | 100.0% | 77.6% |
| 3858855 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.79 | 70.0 | 5.00e-01 | 100.0% | 38.1% |
| 3709674 | 101.1.1.50 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Nop16 | 0.79 | 71.0 | 6.30e-01 | 100.0% | 72.0% |
| 4263795 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.79 | 68.0 | 6.02e-01 | 94.3% | 72.0% |
| 3983493 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.79 | 65.0 | 6.67e-01 | 92.5% | 94.0% |
| 3970076 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 60.0 | 6.20e-01 | 86.8% | 96.0% |
| 3590551 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.78 | 61.0 | 6.23e-01 | 86.8% | 96.0% |
| 4988081 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 66.0 | 6.04e-01 | 94.3% | 75.7% |
| 5014942 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 66.0 | 6.03e-01 | 94.3% | 72.1% |
| 4926913 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.78 | 69.0 | 4.76e-01 | 100.0% | 72.0% |
| 4970540 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 66.0 | 5.43e-01 | 94.3% | 54.7% |
| 4998684 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 64.0 | 5.36e-01 | 94.3% | 55.8% |
| 4957413 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.78 | 60.0 | 6.16e-01 | 86.8% | 96.0% |
| 3982775 | 101.1.1.202 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 | 0.77 | 63.0 | 6.05e-01 | 88.7% | 80.0% |
| 5012343 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.77 | 67.0 | 5.69e-01 | 100.0% | 83.3% |
| 4236554 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.77 | 63.0 | 6.03e-01 | 88.7% | 78.3% |
| 3988910 | 101.1.1.382 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_IS66 | 0.77 | 59.0 | 6.28e-01 | 84.9% | 100.0% |
| 5032570 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 66.0 | 5.35e-01 | 94.3% | 54.7% |
| 4933162 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 65.0 | 6.05e-01 | 94.3% | 76.9% |
| 4188749 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.76 | 67.0 | 5.79e-01 | 98.1% | 81.2% |
| 3407601 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 63.0 | 6.13e-01 | 94.3% | 85.0% |
| 4541862 | 101.1.2.59 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF480 | 0.75 | 65.0 | 4.94e-01 | 100.0% | 41.6% |
| 3956565 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.75 | 57.0 | 5.00e-01 | 86.8% | 57.6% |
| 5081193 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 63.0 | 5.92e-01 | 94.3% | 78.5% |
| 3164764 | 2008.1.1.168 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF30184 | 0.75 | 67.0 | 5.69e-01 | 100.0% | 88.2% |
| 3504540 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.75 | 58.0 | 5.81e-01 | 86.8% | 89.1% |
| 4969465 | 2004.1.1.343 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 | 0.74 | 65.0 | 4.05e-01 | 100.0% | 18.6% |
| 3575777 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.74 | 59.0 | 6.01e-01 | 88.7% | 100.0% |
| 5043893 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.74 | 63.0 | 5.71e-01 | 94.3% | 74.3% |
| 3239718 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 63.0 | 5.97e-01 | 98.1% | 81.5% |
| 4928356 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 62.0 | 5.83e-01 | 94.3% | 78.5% |
| 5029743 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 59.0 | 5.00e-01 | 94.3% | 53.7% |
| 4634397 | 101.1.1.51 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Slx4 | 0.73 | 58.0 | 5.18e-01 | 86.8% | 73.0% |
| 149637 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.73 | 63.0 | 4.96e-01 | 98.1% | 61.6% |
| 4998763 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 59.0 | 5.23e-01 | 94.3% | 61.3% |
| 4575061 | 101.35.1.1 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 | 0.72 | 55.0 | 5.71e-01 | 83.0% | 88.0% |
| 4955367 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 60.0 | 5.53e-01 | 94.3% | 77.1% |
| 3881313 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 56.0 | 5.32e-01 | 88.7% | 75.4% |
| 3987405 | 101.1.1.202 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 | 0.71 | 60.0 | 5.16e-01 | 98.1% | 60.0% |
| 5049455 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.71 | 60.0 | 4.53e-01 | 100.0% | 50.0% |
| 3890613 | 101.1.2.698 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27079 | 0.71 | 56.0 | 5.29e-01 | 88.7% | 75.4% |
| 3672635 | 101.1.1.295 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 | 0.71 | 62.0 | 5.54e-01 | 100.0% | 74.7% |
| 4932158 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.70 | 62.0 | 5.33e-01 | 100.0% | 81.2% |
| 3737539 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.70 | 58.0 | 5.12e-01 | 94.3% | 72.5% |
| 5071263 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 59.0 | 5.02e-01 | 98.1% | 80.0% |
| 4990274 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.69 | 60.0 | 4.86e-01 | 100.0% | 63.8% |
| 5003985 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.69 | 58.0 | 4.43e-01 | 100.0% | 79.3% |
| 4127805 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.69 | 61.0 | 4.38e-01 | 100.0% | 73.3% |
| 3474421 | 101.1.2.365 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEK_C | 0.69 | 55.0 | 5.17e-01 | 94.3% | 78.6% |
| 4033611 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.68 | 52.0 | 5.55e-01 | 84.9% | 100.0% |
| 3269500 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 52.0 | 4.37e-01 | 86.8% | 47.5% |
| 4536531 | 101.35.1.1 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 | 0.66 | 51.0 | 5.29e-01 | 86.8% | 94.0% |
| 3830981 | 109.4.1.1257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 | 0.58 | 46.0 | 3.13e-01 | 88.7% | 36.6% |
| 4991306 | 601.7.1.34 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › DUF4129 | 0.57 | 48.0 | 4.26e-01 | 96.2% | 63.7% |
| 3650959 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.56 | 42.0 | 3.03e-01 | 94.3% | 23.3% |
D4
medium
residues 4-93