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IMGVR_UViG_3300002219_000139-3300002219-SCADCLC_1004105927

Arc-Vir

IMGVR_UViG_3300002219_000139-3300002219-SCADCLC_1004105927

Quality

86.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-74
PDB
CATH (86)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 69.0 7.14e-01 100.0% 96.8%
1biaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 65.0 6.73e-01 98.5% 92.2%
3majA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 59.0 6.19e-01 92.6% 88.3%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 63.0 6.48e-01 97.1% 90.6%
2pmuC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 6.03e-01 95.6% 67.4%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 6.60e-01 92.6% 96.7%
3zq7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 69.0 5.98e-01 95.6% 70.3%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.04e-01 100.0% 41.2%
1j75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 60.0 6.38e-01 95.6% 98.2%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 62.0 6.27e-01 97.1% 87.9%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 6.77e-01 98.5% 97.0%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 5.72e-01 100.0% 65.6%
2oqrA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 67.0 5.70e-01 94.1% 65.4%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 6.38e-01 97.1% 92.3%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 59.0 6.19e-01 95.6% 91.9%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 4.94e-01 100.0% 42.5%
2ff4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 69.0 5.99e-01 97.1% 73.7%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.03e-01 100.0% 44.4%
1qbjC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 6.31e-01 95.6% 92.4%
1cf7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 60.0 6.09e-01 94.1% 86.6%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 4.78e-01 100.0% 41.1%
7lzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.88e-01 92.6% 72.2%
1o57A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 67.0 6.60e-01 95.6% 91.7%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.19e-01 100.0% 50.0%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 5.81e-01 97.1% 71.3%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.93e-01 95.6% 74.1%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 5.88e-01 100.0% 73.3%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 59.0 4.78e-01 100.0% 44.6%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 5.02e-01 100.0% 46.3%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 4.82e-01 100.0% 44.1%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 5.56e-01 100.0% 65.6%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 5.85e-01 98.5% 79.2%
3s2wG00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 4.87e-01 100.0% 45.9%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 5.67e-01 97.1% 75.6%
4b0zA00 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.74 53.0 3.64e-01 94.1% 22.5%
2mlkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 66.0 5.54e-01 97.1% 67.3%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 6.20e-01 95.6% 95.3%
3lfkD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 5.07e-01 100.0% 54.5%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 4.88e-01 100.0% 45.1%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.89e-01 95.6% 82.1%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 65.0 5.38e-01 100.0% 58.3%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 4.84e-01 100.0% 45.1%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.60e-01 98.5% 76.2%
2fswA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.37e-01 100.0% 62.7%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.39e-01 100.0% 64.0%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 5.35e-01 100.0% 69.0%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 4.85e-01 100.0% 46.1%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 5.93e-01 98.5% 83.1%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.39e-01 100.0% 67.0%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.41e-01 100.0% 65.3%
3dplC02 3.30.230.130 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Cullin; Chain C, Domain 2 0.72 64.0 4.74e-01 100.0% 43.9%
2obpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 64.0 6.08e-01 100.0% 84.0%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 4.79e-01 100.0% 46.4%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 5.45e-01 100.0% 64.1%
7bqjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 5.49e-01 100.0% 75.3%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 5.94e-01 95.6% 90.0%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 4.81e-01 98.5% 47.4%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 62.0 4.96e-01 100.0% 49.6%
8amzT01 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.70 56.0 3.73e-01 98.5% 22.3%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.83e-01 97.1% 86.7%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 5.35e-01 100.0% 70.0%
1z7uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 5.24e-01 100.0% 60.9%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 54.0 5.78e-01 98.5% 100.0%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 5.49e-01 100.0% 75.9%
1z6tA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 60.0 5.61e-01 98.5% 78.8%
1ldjA06 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 57.0 5.77e-01 92.6% 97.1%
4d7kA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 5.00e-01 100.0% 64.6%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 61.0 5.25e-01 100.0% 66.0%
4e70A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 59.0 5.19e-01 100.0% 66.3%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 58.0 5.53e-01 100.0% 81.7%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 56.0 5.77e-01 92.6% 98.4%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 58.0 5.30e-01 100.0% 72.0%
4p9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 54.0 5.44e-01 95.6% 91.0%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.67 56.0 5.61e-01 97.1% 91.4%
2m87A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 57.0 4.99e-01 98.5% 65.0%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 4.81e-01 100.0% 68.5%
3gwzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 5.06e-01 98.5% 73.0%
3ke2B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 5.04e-01 100.0% 71.9%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 4.83e-01 100.0% 71.8%
2k4jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 4.67e-01 95.6% 67.6%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 52.0 4.92e-01 98.5% 78.0%
1vtnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 51.0 4.62e-01 100.0% 75.5%
6i7dB01 6.20.240.20 Special › Other non-globular › Alpha-Beta Plaits › 0.61 45.0 4.79e-01 82.4% 91.5%
2rkhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.55e-01 100.0% 71.6%
2vxzA02 1.10.10.1490 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 45.0 4.25e-01 100.0% 92.0%
2oy9A01 1.10.220.80 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › BH2638-like 0.50 40.0 3.97e-01 94.1% 96.1%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4565956 101.1.2.644 alpha arrays › HTH › HTH › winged helix domain › PF29603 0.98 94.0 8.80e-01 100.0% 92.5%
3286851 101.1.2.644 alpha arrays › HTH › HTH › winged helix domain › PF29603 0.86 78.0 7.81e-01 98.5% 97.1%
5078476 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 65.0 6.86e-01 97.1% 95.0%
4998497 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 69.0 7.03e-01 95.6% 96.9%
5054482 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 68.0 6.78e-01 100.0% 91.4%
5079818 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 68.0 6.18e-01 100.0% 71.1%
4928978 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 67.0 5.96e-01 100.0% 66.3%
4962229 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.79 67.0 6.51e-01 98.5% 84.0%
4937458 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 68.0 6.57e-01 100.0% 85.3%
5076263 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 68.0 6.33e-01 100.0% 76.5%
5054801 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.78 67.0 6.06e-01 100.0% 71.1%
4966047 101.1.2.915 alpha arrays › HTH › HTH › winged helix domain › DUF6432 0.78 65.0 5.85e-01 100.0% 66.3%
4948012 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 69.0 5.72e-01 98.5% 57.4%
5079070 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.77 71.0 6.40e-01 100.0% 77.8%
5018207 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.77 69.0 5.86e-01 98.5% 76.4%
4993772 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.77 69.0 5.94e-01 100.0% 70.5%
4937849 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.76 69.0 6.36e-01 100.0% 82.4%
3287693 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.76 66.0 5.65e-01 95.6% 65.7%
4941666 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 60.0 5.28e-01 98.5% 58.6%
3738691 101.1.2.271 alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC 0.76 67.0 6.32e-01 98.5% 82.5%
5079074 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 61.0 5.19e-01 98.5% 54.5%
3577575 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.76 62.0 5.94e-01 98.5% 77.5%
4023460 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 65.0 6.32e-01 98.5% 86.7%
3729904 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.75 65.0 6.03e-01 98.5% 76.5%
4979509 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 67.0 5.94e-01 100.0% 69.5%
5075002 101.1.2.525 alpha arrays › HTH › HTH › winged helix domain › DUF7646 0.75 67.0 5.98e-01 100.0% 70.5%
5060703 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 6.55e-01 97.1% 98.5%
5018467 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 65.0 5.88e-01 100.0% 71.0%
5000528 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.75 67.0 6.05e-01 100.0% 74.4%
4945401 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 4.96e-01 100.0% 43.3%
4959976 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 63.0 5.43e-01 100.0% 59.1%
4984731 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 63.0 5.59e-01 100.0% 65.0%
4374351 101.1.2.95 alpha arrays › HTH › HTH › winged helix domain › DsrD 0.74 62.0 6.35e-01 97.1% 95.4%
3252021 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 63.0 6.01e-01 94.1% 95.0%
5038557 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.74 59.0 5.23e-01 100.0% 60.0%
4978401 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.74 61.0 5.47e-01 98.5% 65.3%
3586898 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.74 62.0 5.44e-01 100.0% 62.1%
3495862 101.1.2.383 alpha arrays › HTH › HTH › winged helix domain › HTH_69 0.74 66.0 5.72e-01 98.5% 66.0%
5010592 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.74 63.0 5.19e-01 95.6% 53.3%
4967668 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.74 63.0 6.01e-01 100.0% 81.2%
5051837 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 4.59e-01 100.0% 33.8%
3977793 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 66.0 5.92e-01 100.0% 75.5%
5048446 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 62.0 6.22e-01 95.6% 92.6%
5041053 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.73 61.0 5.73e-01 98.5% 74.1%
3703137 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.73 60.0 6.04e-01 97.1% 90.0%
4964842 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.73 64.0 5.79e-01 100.0% 72.2%
4966839 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 62.0 5.41e-01 100.0% 61.9%
5053578 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 5.73e-01 92.6% 80.0%
3478591 101.1.2.493 alpha arrays › HTH › HTH › winged helix domain › PF26557 0.73 65.0 5.81e-01 100.0% 80.0%
4052741 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 63.0 5.96e-01 95.6% 83.7%
4965036 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.73 65.0 5.46e-01 100.0% 60.0%
3600734 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 64.0 5.69e-01 100.0% 70.0%
5048665 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 62.0 4.43e-01 100.0% 31.7%
5032090 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.73 58.0 5.83e-01 98.5% 85.7%
4979180 101.1.2.37 alpha arrays › HTH › HTH › winged helix domain › E2F_TDP 0.73 65.0 5.29e-01 100.0% 63.2%
3958859 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 64.0 6.10e-01 100.0% 87.5%
4973726 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 63.0 5.31e-01 100.0% 58.3%
5004401 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.72 59.0 5.43e-01 98.5% 68.9%
4973736 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 64.0 6.25e-01 100.0% 90.7%
4974766 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 62.0 6.03e-01 100.0% 88.0%
4622104 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 63.0 5.80e-01 100.0% 78.9%
5080847 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.71 60.0 6.03e-01 98.5% 92.9%
4964159 101.1.2.205 alpha arrays › HTH › HTH › winged helix domain › PF0610-like_N 0.71 62.0 5.54e-01 95.6% 95.7%
4935554 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 56.0 5.76e-01 92.6% 92.2%
4935606 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 63.0 6.03e-01 100.0% 86.3%
5029087 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 63.0 5.99e-01 100.0% 87.5%
4978419 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.71 61.0 5.91e-01 100.0% 86.7%
4992769 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.71 62.0 5.26e-01 100.0% 60.0%
3483777 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 5.97e-01 100.0% 88.0%
4991130 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 60.0 4.86e-01 100.0% 50.0%
4984018 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 62.0 6.21e-01 100.0% 95.7%
5043135 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.70 60.0 5.36e-01 100.0% 68.4%
4967969 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.70 60.0 4.51e-01 100.0% 39.4%
4987328 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.70 61.0 5.71e-01 98.5% 78.8%
5074567 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 59.0 4.87e-01 100.0% 52.0%
4947441 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 61.0 5.71e-01 100.0% 78.8%
3605925 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.69 59.0 5.94e-01 98.5% 94.3%
5013841 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.69 59.0 4.86e-01 98.5% 52.8%
3387115 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.68 57.0 5.66e-01 100.0% 91.4%
4988497 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.68 61.0 4.58e-01 100.0% 49.7%
5011303 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.68 59.0 5.44e-01 98.5% 75.6%
3288015 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.68 60.0 5.98e-01 100.0% 97.1%
4938001 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.68 58.0 5.29e-01 98.5% 73.7%
4994455 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 58.0 5.16e-01 98.5% 89.0%
4944702 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 59.0 4.68e-01 100.0% 48.6%
5029662 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 58.0 5.11e-01 98.5% 66.0%
5065252 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 59.0 5.22e-01 100.0% 74.0%
1109306 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.67 58.0 5.19e-01 100.0% 68.4%
4928190 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.67 58.0 5.42e-01 98.5% 81.0%
4982703 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.66 57.0 5.26e-01 98.5% 76.7%
5079724 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 56.0 4.91e-01 98.5% 62.9%
4948986 101.1.2.195 alpha arrays › HTH › HTH › winged helix domain › Fic-like_C 0.66 55.0 5.66e-01 95.6% 100.0%
5083337 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.66 57.0 5.15e-01 98.5% 83.2%
4961529 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.66 56.0 5.11e-01 98.5% 88.4%
4978591 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.66 56.0 4.95e-01 98.5% 64.8%
4957685 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 57.0 5.18e-01 100.0% 76.8%
3490352 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 57.0 5.32e-01 100.0% 87.1%
3735781 101.1.2.288 alpha arrays › HTH › HTH › winged helix domain › Stk19 0.65 56.0 4.09e-01 98.5% 51.6%
136975 101.1.2.121 alpha arrays › HTH › HTH › winged helix domain › HTH_43 0.64 55.0 4.90e-01 100.0% 67.0%
3713148 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 52.0 4.66e-01 95.6% 70.5%
D2 medium residues 84-185
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF14279.13 best HNH_5 34.2 2.70e-08 62.7% 73.2%
PF01844.30 HNH 38.1 1.90e-09 53.9% 91.5%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qgpA00 1.10.30.50 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › 0.69 48.0 5.27e-01 70.6% 89.2%
1sqpF00 1.10.1090.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain F › Cytochrome b-c1 complex subunit 7 0.54 30.0 3.01e-01 73.5% 54.3%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5070853 378.1.1.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.79 54.0 5.90e-01 70.6% 83.5%
3950953 377.1.1.78 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH_5 0.77 48.0 5.85e-01 71.6% 92.9%
3277754 377.1.1.88 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH 0.77 48.0 5.85e-01 71.6% 92.9%
3952818 378.1.1.27 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_5 0.77 48.0 5.68e-01 71.6% 87.8%
4932123 377.7.1.2 few secondary structure elements › Glucocorticoid receptor-like › 82 prophage-derived uncharacterized protein ybcO › 82 prophage-derived uncharacterized protein ybcO › HNH 0.74 47.0 5.63e-01 71.6% 94.3%
3307439 378.1.1.0 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.73 51.0 4.80e-01 71.6% 72.1%
3590055 378.1.1.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.72 51.0 4.92e-01 72.5% 72.2%
3952892 378.1.1.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.72 51.0 4.71e-01 72.5% 64.0%
4999440 378.1.1.27 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_5 0.72 52.0 5.78e-01 100.0% 89.4%
3587782 378.1.1.0 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.71 50.0 4.88e-01 71.6% 73.6%
185780 378.1.1.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.69 49.0 5.01e-01 81.4% 75.3%
5016552 378.1.1.10 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 0.68 46.0 4.52e-01 73.5% 64.5%
3948700 378.1.1.9 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 0.68 48.0 4.51e-01 73.5% 78.2%
4998487 378.1.1.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.67 52.0 5.42e-01 100.0% 85.3%
2859872 378.1.1.10 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 0.67 48.0 3.88e-01 77.5% 40.2%
2485694 378.1.1.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.66 48.0 4.33e-01 74.5% 59.0%
3953059 378.1.1.0 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.66 49.0 5.25e-01 77.5% 95.6%
3953218 378.1.1.23 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DUF222 0.61 52.0 4.47e-01 100.0% 59.4%
2991844 378.1.1.10 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 0.61 52.0 5.06e-01 99.0% 83.5%
3952923 378.1.1.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.59 51.0 5.14e-01 99.0% 94.0%
3952384 378.1.1.0 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.59 49.0 5.08e-01 99.0% 94.7%
3286852 378.1.1.0 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.58 51.0 5.16e-01 96.1% 95.0%
1684075 378.1.1.10 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 0.57 52.0 4.31e-01 100.0% 58.7%
3440476 378.1.1.10 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 0.57 51.0 4.85e-01 95.1% 94.1%
3317146 378.1.1.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.57 51.0 4.76e-01 95.1% 91.1%